RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 NISCHQ9Y2I1 1504 aa35.08■■■■□ 3.21
NDRG1-223ENST00000522665 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
NDRG1-223ENST00000522665 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
NDRG1-223ENST00000522665 ABCC9O60706 1549 aa29.37■■■□□ 2.29
NDRG1-223ENST00000522665 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
NDRG1-223ENST00000522665 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
NDRG1-223ENST00000522665 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
NDRG1-223ENST00000522665 NACADO15069 1562 aa28.83■■■□□ 2.21
NDRG1-223ENST00000522665 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
NDRG1-223ENST00000522665 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
NDRG1-223ENST00000522665 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
NDRG1-223ENST00000522665 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
NDRG1-223ENST00000522665 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
NDRG1-223ENST00000522665 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
NDRG1-223ENST00000522665 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
NDRG1-223ENST00000522665 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
NDRG1-223ENST00000522665 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
NDRG1-223ENST00000522665 MROH2BQ7Z745 1585 aa27.03■■□□□ 1.92
NDRG1-223ENST00000522665 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
NDRG1-223ENST00000522665 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
NDRG1-223ENST00000522665 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
NDRG1-223ENST00000522665 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
NDRG1-223ENST00000522665 WIZO95785 1651 aa26.78■■□□□ 1.88
NDRG1-223ENST00000522665 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
NDRG1-223ENST00000522665 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
NDRG1-223ENST00000522665 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
NDRG1-223ENST00000522665 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
NDRG1-223ENST00000522665 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
NDRG1-223ENST00000522665 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
NDRG1-223ENST00000522665 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
NDRG1-223ENST00000522665 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
NDRG1-223ENST00000522665 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
NDRG1-223ENST00000522665 CFTRP13569 1480 aa25.85■■□□□ 1.73
NDRG1-223ENST00000522665 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
NDRG1-223ENST00000522665 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
NDRG1-223ENST00000522665 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
NDRG1-223ENST00000522665 NESP48681 1621 aa25.63■■□□□ 1.69
NDRG1-223ENST00000522665 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
NDRG1-223ENST00000522665 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
NDRG1-223ENST00000522665 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
NDRG1-223ENST00000522665 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
NDRG1-223ENST00000522665 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
NDRG1-223ENST00000522665 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
NDRG1-223ENST00000522665 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
NDRG1-223ENST00000522665 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
NDRG1-223ENST00000522665 SYNJ1O43426 1573 aa25.36■■□□□ 1.65
NDRG1-223ENST00000522665 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
NDRG1-223ENST00000522665 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
NDRG1-223ENST00000522665 CUX1P39880 1505 aa25.32■■□□□ 1.64
NDRG1-223ENST00000522665 ERCC6Q03468 1493 aa25.3■■□□□ 1.64
NDRG1-223ENST00000522665 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
NDRG1-223ENST00000522665 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
NDRG1-223ENST00000522665 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
NDRG1-223ENST00000522665 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
NDRG1-223ENST00000522665 WDR62O43379 1518 aa25.12■■□□□ 1.61
NDRG1-223ENST00000522665 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
NDRG1-223ENST00000522665 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
NDRG1-223ENST00000522665 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
NDRG1-223ENST00000522665 EEA1Q15075 1411 aa25■■□□□ 1.59
NDRG1-223ENST00000522665 SOGA1O94964 1423 aa24.95■■□□□ 1.59
NDRG1-223ENST00000522665 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
NDRG1-223ENST00000522665 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
NDRG1-223ENST00000522665 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
NDRG1-223ENST00000522665 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
NDRG1-223ENST00000522665 CUX2O14529 1486 aa24.89■■□□□ 1.57
NDRG1-223ENST00000522665 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
NDRG1-223ENST00000522665 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
NDRG1-223ENST00000522665 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
NDRG1-223ENST00000522665 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
NDRG1-223ENST00000522665 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
NDRG1-223ENST00000522665 CSRNP3Q8WYN3 585 aa24.75■■□□□ 1.55
NDRG1-223ENST00000522665 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.55
NDRG1-223ENST00000522665 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
NDRG1-223ENST00000522665 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
NDRG1-223ENST00000522665 KIF21BO75037 1637 aa24.65■■□□□ 1.54
NDRG1-223ENST00000522665 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
NDRG1-223ENST00000522665 EIF4G3O43432 1585 aaKnown RBP24.64■■□□□ 1.54
NDRG1-223ENST00000522665 IGF1RP08069 1367 aa24.64■■□□□ 1.53
NDRG1-223ENST00000522665 CUL7Q14999 1698 aa24.62■■□□□ 1.53
NDRG1-223ENST00000522665 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
NDRG1-223ENST00000522665 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
NDRG1-223ENST00000522665 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.534e-11■■■■■ 41.4
NDRG1-223ENST00000522665 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
NDRG1-223ENST00000522665 GOLGA3Q08378 1498 aa24.58■■□□□ 1.52
NDRG1-223ENST00000522665 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
NDRG1-223ENST00000522665 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
NDRG1-223ENST00000522665 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
NDRG1-223ENST00000522665 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
NDRG1-223ENST00000522665 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
NDRG1-223ENST00000522665 FHAD1B1AJZ9 1412 aa24.46■■□□□ 1.51
NDRG1-223ENST00000522665 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
NDRG1-223ENST00000522665 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
NDRG1-223ENST00000522665 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
NDRG1-223ENST00000522665 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
NDRG1-223ENST00000522665 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
NDRG1-223ENST00000522665 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
NDRG1-223ENST00000522665 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
NDRG1-223ENST00000522665 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
NDRG1-223ENST00000522665 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
NDRG1-223ENST00000522665 FBLN2P98095 1184 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms