RNA–Protein interactions for RNA: ENST00000407032.5

NUCB1-202, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NUCB1, Length 2,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-202ENST00000407032 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
NUCB1-202ENST00000407032 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.24
NUCB1-202ENST00000407032 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
NUCB1-202ENST00000407032 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
NUCB1-202ENST00000407032 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
NUCB1-202ENST00000407032 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
NUCB1-202ENST00000407032 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
NUCB1-202ENST00000407032 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
NUCB1-202ENST00000407032 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
NUCB1-202ENST00000407032 ABCC9O60706 1549 aa27.28■■□□□ 1.96
NUCB1-202ENST00000407032 HRCP23327 699 aa26.98■■□□□ 1.91
NUCB1-202ENST00000407032 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
NUCB1-202ENST00000407032 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
NUCB1-202ENST00000407032 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
NUCB1-202ENST00000407032 NACADO15069 1562 aa26.7■■□□□ 1.86
NUCB1-202ENST00000407032 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
NUCB1-202ENST00000407032 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
NUCB1-202ENST00000407032 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
NUCB1-202ENST00000407032 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
NUCB1-202ENST00000407032 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
NUCB1-202ENST00000407032 TRIM41Q8WV44 630 aa26.31■■□□□ 1.8
NUCB1-202ENST00000407032 WIZO95785 1651 aa26.23■■□□□ 1.79
NUCB1-202ENST00000407032 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
NUCB1-202ENST00000407032 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
NUCB1-202ENST00000407032 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.77
NUCB1-202ENST00000407032 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
NUCB1-202ENST00000407032 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
NUCB1-202ENST00000407032 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
NUCB1-202ENST00000407032 ZEB1P37275 1124 aaPredicted RBP25.88■■□□□ 1.73
NUCB1-202ENST00000407032 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
NUCB1-202ENST00000407032 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
NUCB1-202ENST00000407032 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
NUCB1-202ENST00000407032 ABCC8Q09428 1581 aa25.64■■□□□ 1.69
NUCB1-202ENST00000407032 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
NUCB1-202ENST00000407032 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
NUCB1-202ENST00000407032 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
NUCB1-202ENST00000407032 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
NUCB1-202ENST00000407032 EEA1Q15075 1411 aa25.46■■□□□ 1.67
NUCB1-202ENST00000407032 CEP162Q5TB80 1403 aa25.39■■□□□ 1.66
NUCB1-202ENST00000407032 SOGA1O94964 1423 aa25.37■■□□□ 1.65
NUCB1-202ENST00000407032 TNIKQ9UKE5 1360 aa25.36■■□□□ 1.65
NUCB1-202ENST00000407032 GOLGA3Q08378 1498 aa25.23■■□□□ 1.63
NUCB1-202ENST00000407032 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
NUCB1-202ENST00000407032 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
NUCB1-202ENST00000407032 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
NUCB1-202ENST00000407032 KIF21BO75037 1637 aa25.15■■□□□ 1.62
NUCB1-202ENST00000407032 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
NUCB1-202ENST00000407032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.13■■□□□ 1.61
NUCB1-202ENST00000407032 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
NUCB1-202ENST00000407032 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
NUCB1-202ENST00000407032 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.61
NUCB1-202ENST00000407032 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
NUCB1-202ENST00000407032 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
NUCB1-202ENST00000407032 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
NUCB1-202ENST00000407032 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
NUCB1-202ENST00000407032 CLIP1P30622 1438 aa24.88■■□□□ 1.57
NUCB1-202ENST00000407032 SCAF1Q9H7N4 1312 aaKnown RBP24.86■■□□□ 1.57
NUCB1-202ENST00000407032 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
NUCB1-202ENST00000407032 VPS8Q8N3P4 1428 aa24.85■■□□□ 1.57
NUCB1-202ENST00000407032 RAPGEF2Q9Y4G8 1499 aa24.8■■□□□ 1.56
NUCB1-202ENST00000407032 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
NUCB1-202ENST00000407032 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
NUCB1-202ENST00000407032 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
NUCB1-202ENST00000407032 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
NUCB1-202ENST00000407032 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
NUCB1-202ENST00000407032 ACIN1Q9UKV3 1341 aaKnown RBP24.63■■□□□ 1.53
NUCB1-202ENST00000407032 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
NUCB1-202ENST00000407032 CUX1P39880 1505 aa24.57■■□□□ 1.52
NUCB1-202ENST00000407032 ZNF316A6NFI3 1004 aaPredicted RBP24.54■■□□□ 1.52
NUCB1-202ENST00000407032 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
NUCB1-202ENST00000407032 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
NUCB1-202ENST00000407032 APLP2Q06481 763 aa24.51■■□□□ 1.51
NUCB1-202ENST00000407032 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
NUCB1-202ENST00000407032 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
NUCB1-202ENST00000407032 CFTRP13569 1480 aa24.47■■□□□ 1.51
NUCB1-202ENST00000407032 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
NUCB1-202ENST00000407032 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
NUCB1-202ENST00000407032 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
NUCB1-202ENST00000407032 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
NUCB1-202ENST00000407032 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
NUCB1-202ENST00000407032 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
NUCB1-202ENST00000407032 GTF3C3Q9Y5Q9 886 aa24.27■■□□□ 1.48
NUCB1-202ENST00000407032 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
NUCB1-202ENST00000407032 CUX2O14529 1486 aa24.26■■□□□ 1.47
NUCB1-202ENST00000407032 DHX57Q6P158 1386 aaKnown RBP24.25■■□□□ 1.47
NUCB1-202ENST00000407032 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.47
NUCB1-202ENST00000407032 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
NUCB1-202ENST00000407032 MIER1Q8N108 512 aa24.15■■□□□ 1.46
NUCB1-202ENST00000407032 CCNB3Q8WWL7 1395 aa24.11■■□□□ 1.45
NUCB1-202ENST00000407032 IGF1RP08069 1367 aa24.11■■□□□ 1.45
NUCB1-202ENST00000407032 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
NUCB1-202ENST00000407032 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
NUCB1-202ENST00000407032 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
NUCB1-202ENST00000407032 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
NUCB1-202ENST00000407032 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
NUCB1-202ENST00000407032 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
NUCB1-202ENST00000407032 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
NUCB1-202ENST00000407032 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
NUCB1-202ENST00000407032 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
NUCB1-202ENST00000407032 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms