RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 NISCHQ9Y2I1 1504 aa30.28■■■□□ 2.44
NUCB1-201ENST00000405315 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
NUCB1-201ENST00000405315 CCDC180Q9P1Z9 1646 aa25.8■■□□□ 1.72
NUCB1-201ENST00000405315 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
NUCB1-201ENST00000405315 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
NUCB1-201ENST00000405315 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
NUCB1-201ENST00000405315 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
NUCB1-201ENST00000405315 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
NUCB1-201ENST00000405315 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
NUCB1-201ENST00000405315 ABCC9O60706 1549 aa24.26■■□□□ 1.47
NUCB1-201ENST00000405315 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
NUCB1-201ENST00000405315 HRCP23327 699 aa24.06■■□□□ 1.44
NUCB1-201ENST00000405315 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
NUCB1-201ENST00000405315 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
NUCB1-201ENST00000405315 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
NUCB1-201ENST00000405315 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
NUCB1-201ENST00000405315 NACADO15069 1562 aa23.78■■□□□ 1.4
NUCB1-201ENST00000405315 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
NUCB1-201ENST00000405315 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
NUCB1-201ENST00000405315 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
NUCB1-201ENST00000405315 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
NUCB1-201ENST00000405315 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
NUCB1-201ENST00000405315 WIZO95785 1651 aa23.46■■□□□ 1.35
NUCB1-201ENST00000405315 FAM9AQ8IZU1 332 aaPredicted RBP23.39■■□□□ 1.34
NUCB1-201ENST00000405315 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
NUCB1-201ENST00000405315 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
NUCB1-201ENST00000405315 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
NUCB1-201ENST00000405315 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
NUCB1-201ENST00000405315 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
NUCB1-201ENST00000405315 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
NUCB1-201ENST00000405315 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
NUCB1-201ENST00000405315 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
NUCB1-201ENST00000405315 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
NUCB1-201ENST00000405315 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
NUCB1-201ENST00000405315 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
NUCB1-201ENST00000405315 SOGA1O94964 1423 aa22.69■■□□□ 1.22
NUCB1-201ENST00000405315 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
NUCB1-201ENST00000405315 PABPN1Q86U42 306 aaKnown RBP eCLIP22.65■■□□□ 1.22
NUCB1-201ENST00000405315 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
NUCB1-201ENST00000405315 EEA1Q15075 1411 aa22.64■■□□□ 1.21
NUCB1-201ENST00000405315 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
NUCB1-201ENST00000405315 TNIKQ9UKE5 1360 aa22.6■■□□□ 1.21
NUCB1-201ENST00000405315 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
NUCB1-201ENST00000405315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
NUCB1-201ENST00000405315 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
NUCB1-201ENST00000405315 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
NUCB1-201ENST00000405315 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
NUCB1-201ENST00000405315 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
NUCB1-201ENST00000405315 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
NUCB1-201ENST00000405315 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
NUCB1-201ENST00000405315 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
NUCB1-201ENST00000405315 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.18
NUCB1-201ENST00000405315 KIF21BO75037 1637 aa22.37■■□□□ 1.17
NUCB1-201ENST00000405315 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
NUCB1-201ENST00000405315 CLIP1P30622 1438 aa22.21■■□□□ 1.15
NUCB1-201ENST00000405315 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
NUCB1-201ENST00000405315 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
NUCB1-201ENST00000405315 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
NUCB1-201ENST00000405315 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
NUCB1-201ENST00000405315 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
NUCB1-201ENST00000405315 DIEXFQ68CQ4 756 aaKnown RBP22.11■■□□□ 1.13
NUCB1-201ENST00000405315 HMGXB3Q12766 1538 aa22.03■■□□□ 1.12
NUCB1-201ENST00000405315 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
NUCB1-201ENST00000405315 APLP2Q06481 763 aa22■■□□□ 1.11
NUCB1-201ENST00000405315 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
NUCB1-201ENST00000405315 RANGAP1P46060 587 aaPredicted RBP21.98■■□□□ 1.11
NUCB1-201ENST00000405315 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
NUCB1-201ENST00000405315 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
NUCB1-201ENST00000405315 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
NUCB1-201ENST00000405315 ZNF316A6NFI3 1004 aaPredicted RBP21.93■■□□□ 1.1
NUCB1-201ENST00000405315 CUX1P39880 1505 aa21.93■■□□□ 1.1
NUCB1-201ENST00000405315 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
NUCB1-201ENST00000405315 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
NUCB1-201ENST00000405315 CENPBP07199 599 aaPredicted RBP21.86■■□□□ 1.09
NUCB1-201ENST00000405315 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
NUCB1-201ENST00000405315 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
NUCB1-201ENST00000405315 CFTRP13569 1480 aa21.82■■□□□ 1.08
NUCB1-201ENST00000405315 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
NUCB1-201ENST00000405315 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
NUCB1-201ENST00000405315 KANK4Q5T7N3 995 aaPredicted RBP21.69■■□□□ 1.06
NUCB1-201ENST00000405315 ARHGAP35Q9NRY4 1499 aa21.66■■□□□ 1.06
NUCB1-201ENST00000405315 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
NUCB1-201ENST00000405315 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
NUCB1-201ENST00000405315 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
NUCB1-201ENST00000405315 MIER1Q8N108 512 aa21.61■■□□□ 1.05
NUCB1-201ENST00000405315 CUX2O14529 1486 aa21.61■■□□□ 1.05
NUCB1-201ENST00000405315 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
NUCB1-201ENST00000405315 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
NUCB1-201ENST00000405315 IGF1RP08069 1367 aa21.53■■□□□ 1.04
NUCB1-201ENST00000405315 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
NUCB1-201ENST00000405315 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
NUCB1-201ENST00000405315 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
NUCB1-201ENST00000405315 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
NUCB1-201ENST00000405315 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
NUCB1-201ENST00000405315 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
NUCB1-201ENST00000405315 ITGAEP38570 1179 aa21.4■■□□□ 1.02
NUCB1-201ENST00000405315 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
NUCB1-201ENST00000405315 CFAP43Q8NDM7 1665 aa21.36■■□□□ 1.01
NUCB1-201ENST00000405315 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
NUCB1-201ENST00000405315 PCF11O94913 1555 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms