RNA–Protein interactions for RNA: ENST00000520115.5

VDAC3-205, Transcript of voltage dependent anion channel 3, humanhuman

TSL 4

Gene VDAC3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-205ENST00000520115 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
VDAC3-205ENST00000520115 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
VDAC3-205ENST00000520115 ABCC9O60706 1549 aa24.14■■□□□ 1.45
VDAC3-205ENST00000520115 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
VDAC3-205ENST00000520115 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
VDAC3-205ENST00000520115 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
VDAC3-205ENST00000520115 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
VDAC3-205ENST00000520115 NACADO15069 1562 aa23.1■■□□□ 1.29
VDAC3-205ENST00000520115 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
VDAC3-205ENST00000520115 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
VDAC3-205ENST00000520115 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
VDAC3-205ENST00000520115 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
VDAC3-205ENST00000520115 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
VDAC3-205ENST00000520115 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
VDAC3-205ENST00000520115 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
VDAC3-205ENST00000520115 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
VDAC3-205ENST00000520115 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
VDAC3-205ENST00000520115 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
VDAC3-205ENST00000520115 DNAJC5Q9H3Z4 198 aa21.87■■□□□ 1.09
VDAC3-205ENST00000520115 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
VDAC3-205ENST00000520115 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
VDAC3-205ENST00000520115 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
VDAC3-205ENST00000520115 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
VDAC3-205ENST00000520115 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
VDAC3-205ENST00000520115 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
VDAC3-205ENST00000520115 WIZO95785 1651 aa21.51■■□□□ 1.03
VDAC3-205ENST00000520115 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
VDAC3-205ENST00000520115 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
VDAC3-205ENST00000520115 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
VDAC3-205ENST00000520115 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
VDAC3-205ENST00000520115 HMGXB3Q12766 1538 aa21.29■■□□□ 1
VDAC3-205ENST00000520115 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
VDAC3-205ENST00000520115 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
VDAC3-205ENST00000520115 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
VDAC3-205ENST00000520115 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
VDAC3-205ENST00000520115 CUX2O14529 1486 aa20.98■□□□□ 0.95
VDAC3-205ENST00000520115 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
VDAC3-205ENST00000520115 EEA1Q15075 1411 aa20.78■□□□□ 0.92
VDAC3-205ENST00000520115 CFTRP13569 1480 aa20.77■□□□□ 0.92
VDAC3-205ENST00000520115 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
VDAC3-205ENST00000520115 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
VDAC3-205ENST00000520115 CADPSQ9ULU8 1353 aa20.65■□□□□ 0.9
VDAC3-205ENST00000520115 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
VDAC3-205ENST00000520115 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
VDAC3-205ENST00000520115 NESP48681 1621 aa20.56■□□□□ 0.88
VDAC3-205ENST00000520115 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
VDAC3-205ENST00000520115 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
VDAC3-205ENST00000520115 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
VDAC3-205ENST00000520115 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
VDAC3-205ENST00000520115 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
VDAC3-205ENST00000520115 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
VDAC3-205ENST00000520115 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
VDAC3-205ENST00000520115 CUX1P39880 1505 aa20.35■□□□□ 0.85
VDAC3-205ENST00000520115 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
VDAC3-205ENST00000520115 KIF21BO75037 1637 aa20.33■□□□□ 0.84
VDAC3-205ENST00000520115 GOLGA3Q08378 1498 aa20.32■□□□□ 0.84
VDAC3-205ENST00000520115 SOGA1O94964 1423 aa20.31■□□□□ 0.84
VDAC3-205ENST00000520115 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
VDAC3-205ENST00000520115 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
VDAC3-205ENST00000520115 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
VDAC3-205ENST00000520115 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
VDAC3-205ENST00000520115 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
VDAC3-205ENST00000520115 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
VDAC3-205ENST00000520115 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
VDAC3-205ENST00000520115 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
VDAC3-205ENST00000520115 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
VDAC3-205ENST00000520115 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
VDAC3-205ENST00000520115 ABCA10Q8WWZ4 1543 aa20.11■□□□□ 0.81
VDAC3-205ENST00000520115 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
VDAC3-205ENST00000520115 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
VDAC3-205ENST00000520115 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
VDAC3-205ENST00000520115 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
VDAC3-205ENST00000520115 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
VDAC3-205ENST00000520115 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
VDAC3-205ENST00000520115 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
VDAC3-205ENST00000520115 CUL7Q14999 1698 aa19.98■□□□□ 0.79
VDAC3-205ENST00000520115 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
VDAC3-205ENST00000520115 WDR62O43379 1518 aa19.95■□□□□ 0.78
VDAC3-205ENST00000520115 IGF1RP08069 1367 aa19.94■□□□□ 0.78
VDAC3-205ENST00000520115 CLIP1P30622 1438 aa19.92■□□□□ 0.78
VDAC3-205ENST00000520115 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
VDAC3-205ENST00000520115 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
VDAC3-205ENST00000520115 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
VDAC3-205ENST00000520115 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
VDAC3-205ENST00000520115 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
VDAC3-205ENST00000520115 TRIM26Q12899 539 aaPredicted RBP19.87■□□□□ 0.77
VDAC3-205ENST00000520115 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
VDAC3-205ENST00000520115 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
VDAC3-205ENST00000520115 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
VDAC3-205ENST00000520115 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
VDAC3-205ENST00000520115 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
VDAC3-205ENST00000520115 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
VDAC3-205ENST00000520115 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
VDAC3-205ENST00000520115 EFCAB5A4FU69 1503 aa19.74■□□□□ 0.75
VDAC3-205ENST00000520115 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
VDAC3-205ENST00000520115 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
VDAC3-205ENST00000520115 APLP2Q06481 763 aa19.68■□□□□ 0.74
VDAC3-205ENST00000520115 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
VDAC3-205ENST00000520115 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
VDAC3-205ENST00000520115 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms