RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
BRF1-210ENST00000547374 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
BRF1-210ENST00000547374 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
BRF1-210ENST00000547374 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
BRF1-210ENST00000547374 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
BRF1-210ENST00000547374 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
BRF1-210ENST00000547374 EHMT2Q96KQ7 1210 aa21.43■■□□□ 1.02
BRF1-210ENST00000547374 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
BRF1-210ENST00000547374 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
BRF1-210ENST00000547374 HRCP23327 699 aa21.28■■□□□ 1
BRF1-210ENST00000547374 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
BRF1-210ENST00000547374 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
BRF1-210ENST00000547374 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.95
BRF1-210ENST00000547374 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
BRF1-210ENST00000547374 TTBK1Q5TCY1 1321 aaPredicted RBP20.7■□□□□ 0.91
BRF1-210ENST00000547374 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
BRF1-210ENST00000547374 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
BRF1-210ENST00000547374 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
BRF1-210ENST00000547374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
BRF1-210ENST00000547374 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
BRF1-210ENST00000547374 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
BRF1-210ENST00000547374 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
BRF1-210ENST00000547374 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
BRF1-210ENST00000547374 ABCC9O60706 1549 aa20.1■□□□□ 0.81
BRF1-210ENST00000547374 RANGAP1P46060 587 aaPredicted RBP20.09■□□□□ 0.81
BRF1-210ENST00000547374 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
BRF1-210ENST00000547374 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
BRF1-210ENST00000547374 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
BRF1-210ENST00000547374 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
BRF1-210ENST00000547374 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
BRF1-210ENST00000547374 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
BRF1-210ENST00000547374 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
BRF1-210ENST00000547374 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
BRF1-210ENST00000547374 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
BRF1-210ENST00000547374 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
BRF1-210ENST00000547374 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
BRF1-210ENST00000547374 CENPBP07199 599 aaPredicted RBP19.63■□□□□ 0.73
BRF1-210ENST00000547374 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
BRF1-210ENST00000547374 APLP2Q06481 763 aa19.57■□□□□ 0.72
BRF1-210ENST00000547374 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
BRF1-210ENST00000547374 WIZO95785 1651 aa19.52■□□□□ 0.71
BRF1-210ENST00000547374 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
BRF1-210ENST00000547374 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
BRF1-210ENST00000547374 SOGA1O94964 1423 aa19.43■□□□□ 0.7
BRF1-210ENST00000547374 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
BRF1-210ENST00000547374 ITGAEP38570 1179 aa19.4■□□□□ 0.7
BRF1-210ENST00000547374 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
BRF1-210ENST00000547374 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
BRF1-210ENST00000547374 MIER1Q8N108 512 aa19.31■□□□□ 0.68
BRF1-210ENST00000547374 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
BRF1-210ENST00000547374 NACADO15069 1562 aa19.23■□□□□ 0.67
BRF1-210ENST00000547374 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
BRF1-210ENST00000547374 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
BRF1-210ENST00000547374 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
BRF1-210ENST00000547374 CLIP1P30622 1438 aa19.04■□□□□ 0.64
BRF1-210ENST00000547374 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
BRF1-210ENST00000547374 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
BRF1-210ENST00000547374 BCANQ96GW7 911 aa18.96■□□□□ 0.63
BRF1-210ENST00000547374 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
BRF1-210ENST00000547374 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
BRF1-210ENST00000547374 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
BRF1-210ENST00000547374 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
BRF1-210ENST00000547374 HIRIP3Q9BW71 556 aaPredicted RBP18.88■□□□□ 0.61
BRF1-210ENST00000547374 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
BRF1-210ENST00000547374 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
BRF1-210ENST00000547374 EEA1Q15075 1411 aa18.84■□□□□ 0.61
BRF1-210ENST00000547374 RAPGEF2Q9Y4G8 1499 aa18.82■□□□□ 0.6
BRF1-210ENST00000547374 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
BRF1-210ENST00000547374 KCNH8Q96L42 1107 aa18.77■□□□□ 0.59
BRF1-210ENST00000547374 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
BRF1-210ENST00000547374 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
BRF1-210ENST00000547374 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
BRF1-210ENST00000547374 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
BRF1-210ENST00000547374 SIN3AQ96ST3 1273 aa18.68■□□□□ 0.58
BRF1-210ENST00000547374 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
BRF1-210ENST00000547374 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
BRF1-210ENST00000547374 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.58
BRF1-210ENST00000547374 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
BRF1-210ENST00000547374 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
BRF1-210ENST00000547374 FKBP8Q14318 412 aa18.59■□□□□ 0.57
BRF1-210ENST00000547374 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
BRF1-210ENST00000547374 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
BRF1-210ENST00000547374 KIF21BO75037 1637 aa18.53■□□□□ 0.56
BRF1-210ENST00000547374 NEFLP07196 543 aa18.53■□□□□ 0.56
BRF1-210ENST00000547374 MYT1Q01538 1121 aa18.49■□□□□ 0.55
BRF1-210ENST00000547374 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
BRF1-210ENST00000547374 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
BRF1-210ENST00000547374 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
BRF1-210ENST00000547374 RAB3GAP2Q9H2M9 1393 aa18.43■□□□□ 0.54
BRF1-210ENST00000547374 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
BRF1-210ENST00000547374 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
BRF1-210ENST00000547374 ANP32CO43423 234 aa18.4■□□□□ 0.54
BRF1-210ENST00000547374 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
BRF1-210ENST00000547374 POLR3GLQ9BT43 218 aa18.38■□□□□ 0.53
BRF1-210ENST00000547374 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
BRF1-210ENST00000547374 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
BRF1-210ENST00000547374 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
BRF1-210ENST00000547374 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
BRF1-210ENST00000547374 CUX2O14529 1486 aa18.34■□□□□ 0.53
BRF1-210ENST00000547374 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms