RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
SUB1-213ENST00000515355 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
SUB1-213ENST00000515355 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
SUB1-213ENST00000515355 ABCC9O60706 1549 aa24.22■■□□□ 1.47
SUB1-213ENST00000515355 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
SUB1-213ENST00000515355 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
SUB1-213ENST00000515355 RB1CC1Q8TDY2 1594 aa23.15■■□□□ 1.3
SUB1-213ENST00000515355 NACADO15069 1562 aa23.09■■□□□ 1.29
SUB1-213ENST00000515355 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
SUB1-213ENST00000515355 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
SUB1-213ENST00000515355 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
SUB1-213ENST00000515355 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
SUB1-213ENST00000515355 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
SUB1-213ENST00000515355 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
SUB1-213ENST00000515355 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
SUB1-213ENST00000515355 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
SUB1-213ENST00000515355 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
SUB1-213ENST00000515355 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
SUB1-213ENST00000515355 SENP3Q9H4L4 574 aaPredicted RBP21.85■■□□□ 1.09
SUB1-213ENST00000515355 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
SUB1-213ENST00000515355 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
SUB1-213ENST00000515355 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
SUB1-213ENST00000515355 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
SUB1-213ENST00000515355 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
SUB1-213ENST00000515355 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
SUB1-213ENST00000515355 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
SUB1-213ENST00000515355 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
SUB1-213ENST00000515355 SMARCA2P51531 1590 aa21.32■■□□□ 1
SUB1-213ENST00000515355 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
SUB1-213ENST00000515355 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
SUB1-213ENST00000515355 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
SUB1-213ENST00000515355 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
SUB1-213ENST00000515355 WIZO95785 1651 aa21.12■□□□□ 0.97
SUB1-213ENST00000515355 NESP48681 1621 aa20.93■□□□□ 0.94
SUB1-213ENST00000515355 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
SUB1-213ENST00000515355 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
SUB1-213ENST00000515355 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
SUB1-213ENST00000515355 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
SUB1-213ENST00000515355 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
SUB1-213ENST00000515355 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
SUB1-213ENST00000515355 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
SUB1-213ENST00000515355 CFTRP13569 1480 aa20.6■□□□□ 0.89
SUB1-213ENST00000515355 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
SUB1-213ENST00000515355 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
SUB1-213ENST00000515355 CUX2O14529 1486 aa20.54■□□□□ 0.88
SUB1-213ENST00000515355 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
SUB1-213ENST00000515355 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
SUB1-213ENST00000515355 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
SUB1-213ENST00000515355 FOXD1Q16676 465 aa20.4■□□□□ 0.86
SUB1-213ENST00000515355 WDR62O43379 1518 aa20.33■□□□□ 0.85
SUB1-213ENST00000515355 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
SUB1-213ENST00000515355 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
SUB1-213ENST00000515355 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
SUB1-213ENST00000515355 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
SUB1-213ENST00000515355 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
SUB1-213ENST00000515355 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
SUB1-213ENST00000515355 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
SUB1-213ENST00000515355 CUX1P39880 1505 aa20.03■□□□□ 0.8
SUB1-213ENST00000515355 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
SUB1-213ENST00000515355 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
SUB1-213ENST00000515355 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
SUB1-213ENST00000515355 SOGA1O94964 1423 aa20.01■□□□□ 0.79
SUB1-213ENST00000515355 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
SUB1-213ENST00000515355 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.785e-10■■■■■ 39.2
SUB1-213ENST00000515355 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
SUB1-213ENST00000515355 TDRD9Q8NDG6 1382 aaKnown RBP19.94■□□□□ 0.78
SUB1-213ENST00000515355 TARBP1Q13395 1621 aaKnown RBP19.9■□□□□ 0.78
SUB1-213ENST00000515355 FBLN2P98095 1184 aa19.88■□□□□ 0.77
SUB1-213ENST00000515355 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
SUB1-213ENST00000515355 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
SUB1-213ENST00000515355 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
SUB1-213ENST00000515355 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
SUB1-213ENST00000515355 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
SUB1-213ENST00000515355 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
SUB1-213ENST00000515355 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
SUB1-213ENST00000515355 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
SUB1-213ENST00000515355 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
SUB1-213ENST00000515355 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
SUB1-213ENST00000515355 WDR97A6NE52 1622 aa19.67■□□□□ 0.74
SUB1-213ENST00000515355 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
SUB1-213ENST00000515355 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
SUB1-213ENST00000515355 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
SUB1-213ENST00000515355 CHD1O14646 1710 aa19.6■□□□□ 0.73
SUB1-213ENST00000515355 PBRM1Q86U86 1689 aa19.6■□□□□ 0.73
SUB1-213ENST00000515355 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
SUB1-213ENST00000515355 KIF27Q86VH2 1401 aa19.54■□□□□ 0.72
SUB1-213ENST00000515355 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
SUB1-213ENST00000515355 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
SUB1-213ENST00000515355 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
SUB1-213ENST00000515355 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
SUB1-213ENST00000515355 IGF1RP08069 1367 aa19.45■□□□□ 0.7
SUB1-213ENST00000515355 CYB5RLQ6IPT4 315 aa19.42■□□□□ 0.7
SUB1-213ENST00000515355 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
SUB1-213ENST00000515355 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
SUB1-213ENST00000515355 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
SUB1-213ENST00000515355 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
SUB1-213ENST00000515355 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
SUB1-213ENST00000515355 RUSC2Q8N2Y8 1516 aa19.38■□□□□ 0.69
SUB1-213ENST00000515355 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
SUB1-213ENST00000515355 NUP160Q12769 1436 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms