RNA–Protein interactions for RNA: ENST00000518495.5

VDAC3-202, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-202ENST00000518495 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
VDAC3-202ENST00000518495 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
VDAC3-202ENST00000518495 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
VDAC3-202ENST00000518495 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
VDAC3-202ENST00000518495 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
VDAC3-202ENST00000518495 FOXD1Q16676 465 aa12.86□□□□□ -0.35
VDAC3-202ENST00000518495 ADRA2BP18089 450 aa12.46□□□□□ -0.41
VDAC3-202ENST00000518495 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.41
VDAC3-202ENST00000518495 PIAS4Q8N2W9 510 aaPredicted RBP12.14□□□□□ -0.47
VDAC3-202ENST00000518495 MSH5O43196 834 aa11.81□□□□□ -0.52
VDAC3-202ENST00000518495 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
VDAC3-202ENST00000518495 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
VDAC3-202ENST00000518495 KCNA4P22459 653 aa11.39□□□□□ -0.59
VDAC3-202ENST00000518495 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
VDAC3-202ENST00000518495 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
VDAC3-202ENST00000518495 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
VDAC3-202ENST00000518495 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
VDAC3-202ENST00000518495 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
VDAC3-202ENST00000518495 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
VDAC3-202ENST00000518495 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
VDAC3-202ENST00000518495 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
VDAC3-202ENST00000518495 POTEDQ86YR6 584 aa10.77□□□□□ -0.69
VDAC3-202ENST00000518495 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
VDAC3-202ENST00000518495 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
VDAC3-202ENST00000518495 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
VDAC3-202ENST00000518495 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
VDAC3-202ENST00000518495 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
VDAC3-202ENST00000518495 ZBTB22O15209 634 aa10.48□□□□□ -0.73
VDAC3-202ENST00000518495 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
VDAC3-202ENST00000518495 FOXD4L1Q9NU39 408 aa10.44□□□□□ -0.74
VDAC3-202ENST00000518495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.758e-6■□□□□ 10.7
VDAC3-202ENST00000518495 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
VDAC3-202ENST00000518495 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
VDAC3-202ENST00000518495 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
VDAC3-202ENST00000518495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
VDAC3-202ENST00000518495 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
VDAC3-202ENST00000518495 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
VDAC3-202ENST00000518495 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
VDAC3-202ENST00000518495 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
VDAC3-202ENST00000518495 APLP2Q06481 763 aa9.99□□□□□ -0.81
VDAC3-202ENST00000518495 ATF5Q9Y2D1 282 aaPredicted RBP9.99□□□□□ -0.81
VDAC3-202ENST00000518495 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
VDAC3-202ENST00000518495 CAPN15O75808 1086 aa9.86□□□□□ -0.83
VDAC3-202ENST00000518495 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
VDAC3-202ENST00000518495 ZNF219Q9P2Y4 722 aaPredicted RBP9.84□□□□□ -0.83
VDAC3-202ENST00000518495 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
VDAC3-202ENST00000518495 CACNB1Q02641 598 aaPredicted RBP9.81□□□□□ -0.84
VDAC3-202ENST00000518495 TTBK1Q5TCY1 1321 aaPredicted RBP9.75□□□□□ -0.85
VDAC3-202ENST00000518495 POLA2Q14181 598 aa9.71□□□□□ -0.86
VDAC3-202ENST00000518495 MYT1Q01538 1121 aa9.7□□□□□ -0.86
VDAC3-202ENST00000518495 ABCB7O75027 752 aa9.68□□□□□ -0.86
VDAC3-202ENST00000518495 DSG3P32926 999 aa9.68□□□□□ -0.86
VDAC3-202ENST00000518495 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
VDAC3-202ENST00000518495 FBLN2P98095 1184 aa9.56□□□□□ -0.88
VDAC3-202ENST00000518495 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
VDAC3-202ENST00000518495 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
VDAC3-202ENST00000518495 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
VDAC3-202ENST00000518495 FKBP8Q14318 412 aa9.49□□□□□ -0.89
VDAC3-202ENST00000518495 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
VDAC3-202ENST00000518495 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
VDAC3-202ENST00000518495 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
VDAC3-202ENST00000518495 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
VDAC3-202ENST00000518495 ARXQ96QS3 562 aa9.35□□□□□ -0.91
VDAC3-202ENST00000518495 SPDYE2BA6NHP3 402 aa9.3□□□□□ -0.92
VDAC3-202ENST00000518495 SPDYE6P0CI01 402 aa9.3□□□□□ -0.92
VDAC3-202ENST00000518495 SPDYE2Q495Y8 402 aa9.3□□□□□ -0.92
VDAC3-202ENST00000518495 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
VDAC3-202ENST00000518495 PROM2Q8N271 834 aa9.24□□□□□ -0.93
VDAC3-202ENST00000518495 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
VDAC3-202ENST00000518495 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
VDAC3-202ENST00000518495 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
VDAC3-202ENST00000518495 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
VDAC3-202ENST00000518495 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
VDAC3-202ENST00000518495 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
VDAC3-202ENST00000518495 REM2Q8IYK8 340 aaPredicted RBP9.05□□□□□ -0.96
VDAC3-202ENST00000518495 STAG3Q9UJ98 1225 aa9.03□□□□□ -0.96
VDAC3-202ENST00000518495 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
VDAC3-202ENST00000518495 SPDYE1Q8NFV5 336 aaPredicted RBP9.01□□□□□ -0.97
VDAC3-202ENST00000518495 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
VDAC3-202ENST00000518495 VASPP50552 380 aaPredicted RBP8.99□□□□□ -0.97
VDAC3-202ENST00000518495 BCANQ96GW7 911 aa8.96□□□□□ -0.98
VDAC3-202ENST00000518495 CLEC11AQ9Y240 323 aa8.96□□□□□ -0.98
VDAC3-202ENST00000518495 PITPNM1O00562 1244 aa8.93□□□□□ -0.98
VDAC3-202ENST00000518495 TIMELESSQ9UNS1 1208 aa8.93□□□□□ -0.98
VDAC3-202ENST00000518495 TAOK2Q9UL54 1235 aa8.92□□□□□ -0.98
VDAC3-202ENST00000518495 MIER1Q8N108 512 aa8.91□□□□□ -0.98
VDAC3-202ENST00000518495 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
VDAC3-202ENST00000518495 PLCD3Q8N3E9 789 aa8.9□□□□□ -0.98
VDAC3-202ENST00000518495 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
VDAC3-202ENST00000518495 PLEKHG5O94827 1062 aa8.84□□□□□ -0.99
VDAC3-202ENST00000518495 KLHL34Q8N239 644 aa8.83□□□□□ -1
VDAC3-202ENST00000518495 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
VDAC3-202ENST00000518495 CREBZFQ9NS37 354 aa8.81□□□□□ -1
VDAC3-202ENST00000518495 CHRDL2Q6WN34 429 aa8.8□□□□□ -1
VDAC3-202ENST00000518495 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
VDAC3-202ENST00000518495 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
VDAC3-202ENST00000518495 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.01
VDAC3-202ENST00000518495 MNX1P50219 401 aaPredicted RBP8.73□□□□□ -1.01
VDAC3-202ENST00000518495 CHADLQ6NUI6 762 aa8.73□□□□□ -1.01
VDAC3-202ENST00000518495 PRKAR2AP13861 404 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 1022.3 ms