RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 NISCHQ9Y2I1 1504 aa27.37■■□□□ 1.97
BRF1-222ENST00000635152 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
BRF1-222ENST00000635152 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
BRF1-222ENST00000635152 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
BRF1-222ENST00000635152 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
BRF1-222ENST00000635152 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
BRF1-222ENST00000635152 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
BRF1-222ENST00000635152 CHIC1Q5VXU3 224 aa22.16■■□□□ 1.14
BRF1-222ENST00000635152 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
BRF1-222ENST00000635152 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
BRF1-222ENST00000635152 ABCC9O60706 1549 aa21.85■■□□□ 1.09
BRF1-222ENST00000635152 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
BRF1-222ENST00000635152 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.05
BRF1-222ENST00000635152 NACADO15069 1562 aa21.56■■□□□ 1.04
BRF1-222ENST00000635152 CECR2Q9BXF3 1484 aa21.44■■□□□ 1.02
BRF1-222ENST00000635152 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
BRF1-222ENST00000635152 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.02
BRF1-222ENST00000635152 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
BRF1-222ENST00000635152 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
BRF1-222ENST00000635152 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
BRF1-222ENST00000635152 HRCP23327 699 aa21.22■□□□□ 0.99
BRF1-222ENST00000635152 WIZO95785 1651 aa21.17■□□□□ 0.98
BRF1-222ENST00000635152 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
BRF1-222ENST00000635152 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
BRF1-222ENST00000635152 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
BRF1-222ENST00000635152 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
BRF1-222ENST00000635152 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
BRF1-222ENST00000635152 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
BRF1-222ENST00000635152 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
BRF1-222ENST00000635152 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
BRF1-222ENST00000635152 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
BRF1-222ENST00000635152 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
BRF1-222ENST00000635152 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
BRF1-222ENST00000635152 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
BRF1-222ENST00000635152 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
BRF1-222ENST00000635152 SOGA1O94964 1423 aa20.51■□□□□ 0.87
BRF1-222ENST00000635152 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
BRF1-222ENST00000635152 RUSC2Q8N2Y8 1516 aa20.42■□□□□ 0.86
BRF1-222ENST00000635152 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
BRF1-222ENST00000635152 CSRNP3Q8WYN3 585 aa20.4■□□□□ 0.86
BRF1-222ENST00000635152 PEG3Q9GZU2 1588 aa20.4■□□□□ 0.86
BRF1-222ENST00000635152 UBTFP17480 764 aaKnown RBP20.39■□□□□ 0.85
BRF1-222ENST00000635152 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
BRF1-222ENST00000635152 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
BRF1-222ENST00000635152 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
BRF1-222ENST00000635152 CEP162Q5TB80 1403 aa20.33■□□□□ 0.85
BRF1-222ENST00000635152 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
BRF1-222ENST00000635152 EEA1Q15075 1411 aa20.27■□□□□ 0.84
BRF1-222ENST00000635152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
BRF1-222ENST00000635152 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
BRF1-222ENST00000635152 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
BRF1-222ENST00000635152 CCER1Q8TC90 406 aaPredicted RBP20.16■□□□□ 0.82
BRF1-222ENST00000635152 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
BRF1-222ENST00000635152 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
BRF1-222ENST00000635152 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
BRF1-222ENST00000635152 NCAPD3P42695 1498 aa20■□□□□ 0.79
BRF1-222ENST00000635152 CLIP1P30622 1438 aa19.99■□□□□ 0.79
BRF1-222ENST00000635152 KIF21BO75037 1637 aa19.97■□□□□ 0.79
BRF1-222ENST00000635152 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
BRF1-222ENST00000635152 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
BRF1-222ENST00000635152 APLP2Q06481 763 aa19.88■□□□□ 0.77
BRF1-222ENST00000635152 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
BRF1-222ENST00000635152 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
BRF1-222ENST00000635152 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.77
BRF1-222ENST00000635152 CUX1P39880 1505 aa19.83■□□□□ 0.77
BRF1-222ENST00000635152 CFTRP13569 1480 aa19.82■□□□□ 0.76
BRF1-222ENST00000635152 PRXQ9BXM0 1461 aa19.76■□□□□ 0.75
BRF1-222ENST00000635152 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
BRF1-222ENST00000635152 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
BRF1-222ENST00000635152 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
BRF1-222ENST00000635152 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
BRF1-222ENST00000635152 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
BRF1-222ENST00000635152 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
BRF1-222ENST00000635152 CUX2O14529 1486 aa19.61■□□□□ 0.73
BRF1-222ENST00000635152 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
BRF1-222ENST00000635152 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.72
BRF1-222ENST00000635152 IGF1RP08069 1367 aa19.56■□□□□ 0.72
BRF1-222ENST00000635152 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
BRF1-222ENST00000635152 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
BRF1-222ENST00000635152 ARHGAP35Q9NRY4 1499 aa19.51■□□□□ 0.71
BRF1-222ENST00000635152 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
BRF1-222ENST00000635152 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
BRF1-222ENST00000635152 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
BRF1-222ENST00000635152 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
BRF1-222ENST00000635152 ITGAEP38570 1179 aa19.44■□□□□ 0.7
BRF1-222ENST00000635152 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
BRF1-222ENST00000635152 NESP48681 1621 aa19.42■□□□□ 0.7
BRF1-222ENST00000635152 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.7
BRF1-222ENST00000635152 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
BRF1-222ENST00000635152 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
BRF1-222ENST00000635152 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
BRF1-222ENST00000635152 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
BRF1-222ENST00000635152 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
BRF1-222ENST00000635152 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
BRF1-222ENST00000635152 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
BRF1-222ENST00000635152 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
BRF1-222ENST00000635152 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
BRF1-222ENST00000635152 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
BRF1-222ENST00000635152 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.68
BRF1-222ENST00000635152 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms