RNA–Protein interactions for RNA: ENST00000518563.5

VDAC3-203, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-203ENST00000518563 NISCHQ9Y2I1 1504 aa62.88■■■■■ 7.66
VDAC3-203ENST00000518563 CCDC180Q9P1Z9 1646 aa55.8■■■■■ 6.52
VDAC3-203ENST00000518563 ABCC9O60706 1549 aa54.61■■■■■ 6.33
VDAC3-203ENST00000518563 DCAF8L2P0C7V8 631 aa52.55■■■■■ 6
VDAC3-203ENST00000518563 RB1CC1Q8TDY2 1594 aa52.52■■■■■ 6
VDAC3-203ENST00000518563 NACADO15069 1562 aa52.5■■■■■ 5.99
VDAC3-203ENST00000518563 ZCCHC6Q5VYS8 1495 aaKnown RBP52.37■■■■■ 5.97
VDAC3-203ENST00000518563 MYO15BQ96JP2 1530 aa52.22■■■■■ 5.95
VDAC3-203ENST00000518563 DCAF1Q9Y4B6 1507 aa52.02■■■■■ 5.92
VDAC3-203ENST00000518563 UNC13AQ9UPW8 1703 aa51.32■■■■■ 5.81
VDAC3-203ENST00000518563 PABPN1Q86U42 306 aaKnown RBP eCLIP51.1■■■■■ 5.77
VDAC3-203ENST00000518563 BICRAQ9NZM4 1560 aa50.98■■■■■ 5.75
VDAC3-203ENST00000518563 SCRIBQ14160 1630 aa50.94■■■■■ 5.74
VDAC3-203ENST00000518563 SHROOM4Q9ULL8 1493 aa50.39■■■■■ 5.66
VDAC3-203ENST00000518563 DNAJC5BQ9UF47 199 aa50.18■■■■■ 5.62
VDAC3-203ENST00000518563 EIF4G1Q04637 1599 aaKnown RBP49.6■■■■■ 5.53
VDAC3-203ENST00000518563 CC2D2AQ9P2K1 1620 aa49.39■■■■■ 5.5
VDAC3-203ENST00000518563 CECR2Q9BXF3 1484 aa49.06■■■■■ 5.44
VDAC3-203ENST00000518563 SMARCA4P51532 1647 aa48.75■■■■■ 5.39
VDAC3-203ENST00000518563 BAZ1AQ9NRL2 1556 aaPredicted RBP48.7■■■■■ 5.39
VDAC3-203ENST00000518563 ATAD2BQ9ULI0 1458 aa48.51■■■■■ 5.36
VDAC3-203ENST00000518563 NCAPD3P42695 1498 aa48.49■■■■■ 5.35
VDAC3-203ENST00000518563 MROH2BQ7Z745 1585 aa48.47■■■■■ 5.35
VDAC3-203ENST00000518563 SMARCA2P51531 1590 aa48.41■■■■■ 5.34
VDAC3-203ENST00000518563 PEG3Q9GZU2 1588 aa48.29■■■■■ 5.32
VDAC3-203ENST00000518563 HMGXB3Q12766 1538 aa48.19■■■■■ 5.31
VDAC3-203ENST00000518563 BAZ1BQ9UIG0 1483 aaKnown RBP48.08■■■■■ 5.29
VDAC3-203ENST00000518563 RSF1Q96T23 1441 aaPredicted RBP47.96■■■■■ 5.27
VDAC3-203ENST00000518563 WIZO95785 1651 aa47.92■■■■■ 5.26
VDAC3-203ENST00000518563 TOP2AP11388 1531 aaKnown RBP47.4■■■■■ 5.18
VDAC3-203ENST00000518563 NESP48681 1621 aa47.29■■■■■ 5.16
VDAC3-203ENST00000518563 LAMC3Q9Y6N6 1575 aa47.14■■■■■ 5.14
VDAC3-203ENST00000518563 CADPSQ9ULU8 1353 aa47.08■■■■■ 5.13
VDAC3-203ENST00000518563 ERCC6Q03468 1493 aa47.03■■■■■ 5.12
VDAC3-203ENST00000518563 CCDC88BA6NC98 1476 aa46.9■■■■■ 5.1
VDAC3-203ENST00000518563 PDS5BQ9NTI5 1447 aa46.85■■■■■ 5.09
VDAC3-203ENST00000518563 SUPT5HO00267 1087 aaKnown RBP46.8■■■■■ 5.08
VDAC3-203ENST00000518563 CFTRP13569 1480 aa46.8■■■■■ 5.08
VDAC3-203ENST00000518563 KIF21AQ7Z4S6 1674 aa46.67■■■■■ 5.06
VDAC3-203ENST00000518563 CUX2O14529 1486 aa46.52■■■■■ 5.04
VDAC3-203ENST00000518563 THOC2Q8NI27 1593 aaKnown RBP46.52■■■■■ 5.04
VDAC3-203ENST00000518563 FANCD2Q9BXW9 1451 aa46.51■■■■■ 5.04
VDAC3-203ENST00000518563 CEP164Q9UPV0 1460 aa46.42■■■■■ 5.02
VDAC3-203ENST00000518563 MRC2Q9UBG0 1479 aa46.35■■■■■ 5.01
VDAC3-203ENST00000518563 PRDM2Q13029 1718 aa46.34■■■■■ 5.01
VDAC3-203ENST00000518563 WDR62O43379 1518 aa46.19■■■■■ 4.99
VDAC3-203ENST00000518563 URB2Q14146 1524 aaKnown RBP46.05■■■■■ 4.96
VDAC3-203ENST00000518563 TOPBP1Q92547 1522 aa45.77■■■■■ 4.92
VDAC3-203ENST00000518563 ABCC8Q09428 1581 aa45.77■■■■■ 4.92
VDAC3-203ENST00000518563 DNMBPQ6XZF7 1577 aa45.7■■■■■ 4.91
VDAC3-203ENST00000518563 IFT140Q96RY7 1462 aa45.46■■■■■ 4.87
VDAC3-203ENST00000518563 CUX1P39880 1505 aa45.46■■■■■ 4.87
VDAC3-203ENST00000518563 POLA1P09884 1462 aaPredicted RBP45.39■■■■■ 4.86
VDAC3-203ENST00000518563 FGD5Q6ZNL6 1462 aa45.29■■■■■ 4.84
VDAC3-203ENST00000518563 ZNF608Q9ULD9 1512 aaPredicted RBP45.27■■■■■ 4.84
VDAC3-203ENST00000518563 TARBP1Q13395 1621 aaKnown RBP45.26■■■■■ 4.84
VDAC3-203ENST00000518563 SOGA1O94964 1423 aa45.24■■■■■ 4.83
VDAC3-203ENST00000518563 RAD54L2Q9Y4B4 1467 aa45.22■■■■■ 4.83
VDAC3-203ENST00000518563 WRNQ14191 1432 aaPredicted RBP eCLIP45.18■■■■■ 4.82
VDAC3-203ENST00000518563 DNAJC5Q9H3Z4 198 aa45.12■■■■■ 4.81
VDAC3-203ENST00000518563 SYNJ1O43426 1573 aa45.06■■■■■ 4.8
VDAC3-203ENST00000518563 TOP2BQ02880 1626 aa45.05■■■■■ 4.8
VDAC3-203ENST00000518563 AQRO60306 1485 aaKnown RBP eCLIP45.04■■■■■ 4.87e-7■■■■□ 24.5
VDAC3-203ENST00000518563 EIF4G3O43432 1585 aaKnown RBP45.04■■■■■ 4.8
VDAC3-203ENST00000518563 BIVM-ERCC5R4GMW8 1640 aa45.04■■■■■ 4.8
VDAC3-203ENST00000518563 TDRD9Q8NDG6 1382 aaKnown RBP44.98■■■■■ 4.79
VDAC3-203ENST00000518563 WDR97A6NE52 1622 aa44.86■■■■■ 4.77
VDAC3-203ENST00000518563 ABCA10Q8WWZ4 1543 aa44.85■■■■■ 4.77
VDAC3-203ENST00000518563 GAPVD1Q14C86 1478 aa44.69■■■■■ 4.74
VDAC3-203ENST00000518563 OSCARQ8IYS5 282 aa44.68■■■■■ 4.74
VDAC3-203ENST00000518563 GRIN2BQ13224 1484 aa44.66■■■■■ 4.74
VDAC3-203ENST00000518563 ABCA5Q8WWZ7 1642 aa44.64■■■■■ 4.74
VDAC3-203ENST00000518563 SNAPC4Q5SXM2 1469 aa44.59■■■■■ 4.73
VDAC3-203ENST00000518563 MAGI1Q96QZ7 1491 aaPredicted RBP44.53■■■■■ 4.72
VDAC3-203ENST00000518563 PBRM1Q86U86 1689 aa44.52■■■■■ 4.72
VDAC3-203ENST00000518563 FBLN2P98095 1184 aa44.48■■■■■ 4.71
VDAC3-203ENST00000518563 CHD1O14646 1710 aa44.45■■■■■ 4.71
VDAC3-203ENST00000518563 CHMP7Q8WUX9 453 aaPredicted RBP44.38■■■■■ 4.7
VDAC3-203ENST00000518563 SYNJ2O15056 1496 aa44.36■■■■■ 4.69
VDAC3-203ENST00000518563 ERICH3Q5RHP9 1530 aa44.3■■■■■ 4.68
VDAC3-203ENST00000518563 KIF27Q86VH2 1401 aa44.24■■■■■ 4.67
VDAC3-203ENST00000518563 ADAMTS12P58397 1594 aa44.2■■■■■ 4.67
VDAC3-203ENST00000518563 TRIM41Q8WV44 630 aa44.2■■■■■ 4.67
VDAC3-203ENST00000518563 FHAD1B1AJZ9 1412 aa44.17■■■■■ 4.66
VDAC3-203ENST00000518563 IGF1RP08069 1367 aa44.11■■■■■ 4.65
VDAC3-203ENST00000518563 GRIN2AQ12879 1464 aa44.08■■■■■ 4.65
VDAC3-203ENST00000518563 CLASP1Q7Z460 1538 aa44.02■■■■■ 4.64
VDAC3-203ENST00000518563 NUP160Q12769 1436 aa43.91■■■■■ 4.62
VDAC3-203ENST00000518563 ARHGEF11O15085 1522 aa43.9■■■■■ 4.62
VDAC3-203ENST00000518563 RUSC2Q8N2Y8 1516 aa43.9■■■■■ 4.62
VDAC3-203ENST00000518563 RIMBP3CA6NJZ7 1639 aa43.88■■■■■ 4.62
VDAC3-203ENST00000518563 RIMBP3BA6NNM3 1639 aa43.88■■■■■ 4.62
VDAC3-203ENST00000518563 RIMBP3Q9UFD9 1639 aa43.88■■■■■ 4.62
VDAC3-203ENST00000518563 CUL7Q14999 1698 aa43.88■■■■■ 4.61
VDAC3-203ENST00000518563 CEP170Q5SW79 1584 aa43.86■■■■■ 4.61
VDAC3-203ENST00000518563 CARMIL1Q5VZK9 1371 aa43.82■■■■■ 4.61
VDAC3-203ENST00000518563 CHIC1Q5VXU3 224 aa43.74■■■■■ 4.59
VDAC3-203ENST00000518563 ARAP1Q96P48 1450 aa43.56■■■■■ 4.56
VDAC3-203ENST00000518563 CYB5RLQ6IPT4 315 aa43.55■■■■■ 4.56
VDAC3-203ENST00000518563 RAPGEF2Q9Y4G8 1499 aa43.54■■■■■ 4.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms