RNA–Protein interactions for RNA: ENST00000519278.5

NDRG1-212, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-212ENST00000519278 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
NDRG1-212ENST00000519278 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
NDRG1-212ENST00000519278 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
NDRG1-212ENST00000519278 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
NDRG1-212ENST00000519278 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
NDRG1-212ENST00000519278 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
NDRG1-212ENST00000519278 HRCP23327 699 aa16.32■□□□□ 0.2
NDRG1-212ENST00000519278 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
NDRG1-212ENST00000519278 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
NDRG1-212ENST00000519278 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
NDRG1-212ENST00000519278 ABCC9O60706 1549 aa16.06■□□□□ 0.16
NDRG1-212ENST00000519278 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
NDRG1-212ENST00000519278 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
NDRG1-212ENST00000519278 MYT1Q01538 1121 aa15.94■□□□□ 0.14
NDRG1-212ENST00000519278 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
NDRG1-212ENST00000519278 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
NDRG1-212ENST00000519278 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
NDRG1-212ENST00000519278 NACADO15069 1562 aa15.72■□□□□ 0.11
NDRG1-212ENST00000519278 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
NDRG1-212ENST00000519278 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
NDRG1-212ENST00000519278 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
NDRG1-212ENST00000519278 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
NDRG1-212ENST00000519278 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
NDRG1-212ENST00000519278 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
NDRG1-212ENST00000519278 WIZO95785 1651 aa15.54■□□□□ 0.08
NDRG1-212ENST00000519278 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
NDRG1-212ENST00000519278 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
NDRG1-212ENST00000519278 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
NDRG1-212ENST00000519278 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
NDRG1-212ENST00000519278 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
NDRG1-212ENST00000519278 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
NDRG1-212ENST00000519278 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
NDRG1-212ENST00000519278 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
NDRG1-212ENST00000519278 ZEB1P37275 1124 aaPredicted RBP15.14■□□□□ 0.01
NDRG1-212ENST00000519278 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
NDRG1-212ENST00000519278 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
NDRG1-212ENST00000519278 ABCC8Q09428 1581 aa15.07■□□□□ 0
NDRG1-212ENST00000519278 ACIN1Q9UKV3 1341 aaKnown RBP15.06■□□□□ 0
NDRG1-212ENST00000519278 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
NDRG1-212ENST00000519278 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.017e-17■□□□□ 9
NDRG1-212ENST00000519278 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
NDRG1-212ENST00000519278 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
NDRG1-212ENST00000519278 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
NDRG1-212ENST00000519278 FAM9AQ8IZU1 332 aaPredicted RBP14.88□□□□□ -0.03
NDRG1-212ENST00000519278 CENPBP07199 599 aaPredicted RBP14.87□□□□□ -0.03
NDRG1-212ENST00000519278 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
NDRG1-212ENST00000519278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
NDRG1-212ENST00000519278 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
NDRG1-212ENST00000519278 SOGA1O94964 1423 aa14.83□□□□□ -0.04
NDRG1-212ENST00000519278 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
NDRG1-212ENST00000519278 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
NDRG1-212ENST00000519278 BCL11AQ9H165 835 aa14.77□□□□□ -0.04
NDRG1-212ENST00000519278 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
NDRG1-212ENST00000519278 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
NDRG1-212ENST00000519278 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
NDRG1-212ENST00000519278 KIF21BO75037 1637 aa14.69□□□□□ -0.06
NDRG1-212ENST00000519278 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
NDRG1-212ENST00000519278 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
NDRG1-212ENST00000519278 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
NDRG1-212ENST00000519278 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
NDRG1-212ENST00000519278 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
NDRG1-212ENST00000519278 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
NDRG1-212ENST00000519278 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
NDRG1-212ENST00000519278 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
NDRG1-212ENST00000519278 EEA1Q15075 1411 aa14.49□□□□□ -0.09
NDRG1-212ENST00000519278 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
NDRG1-212ENST00000519278 CUX1P39880 1505 aa14.48□□□□□ -0.09
NDRG1-212ENST00000519278 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
NDRG1-212ENST00000519278 MIER1Q8N108 512 aa14.47□□□□□ -0.09
NDRG1-212ENST00000519278 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
NDRG1-212ENST00000519278 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
NDRG1-212ENST00000519278 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
NDRG1-212ENST00000519278 PRXQ9BXM0 1461 aa14.41□□□□□ -0.1
NDRG1-212ENST00000519278 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
NDRG1-212ENST00000519278 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
NDRG1-212ENST00000519278 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
NDRG1-212ENST00000519278 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
NDRG1-212ENST00000519278 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
NDRG1-212ENST00000519278 CLIP1P30622 1438 aa14.36□□□□□ -0.11
NDRG1-212ENST00000519278 CFTRP13569 1480 aa14.33□□□□□ -0.12
NDRG1-212ENST00000519278 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
NDRG1-212ENST00000519278 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
NDRG1-212ENST00000519278 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
NDRG1-212ENST00000519278 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
NDRG1-212ENST00000519278 LRRIQ1Q96JM4 1722 aa14.23□□□□□ -0.13
NDRG1-212ENST00000519278 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
NDRG1-212ENST00000519278 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
NDRG1-212ENST00000519278 CUX2O14529 1486 aa14.18□□□□□ -0.14
NDRG1-212ENST00000519278 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
NDRG1-212ENST00000519278 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
NDRG1-212ENST00000519278 CFAP43Q8NDM7 1665 aa14.11□□□□□ -0.15
NDRG1-212ENST00000519278 RRBP1Q9P2E9 1410 aaKnown RBP14.11□□□□□ -0.15
NDRG1-212ENST00000519278 CADPSQ9ULU8 1353 aa14.1□□□□□ -0.15
NDRG1-212ENST00000519278 UBTFP17480 764 aaKnown RBP14.08□□□□□ -0.16
NDRG1-212ENST00000519278 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
NDRG1-212ENST00000519278 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
NDRG1-212ENST00000519278 KANK4Q5T7N3 995 aaPredicted RBP14.06□□□□□ -0.16
NDRG1-212ENST00000519278 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
NDRG1-212ENST00000519278 IGF1RP08069 1367 aa14.04□□□□□ -0.16
NDRG1-212ENST00000519278 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms