RNA–Protein interactions for RNA: ENST00000289416.9

ACSM3-201, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACSM3, Length 2,845 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-201ENST00000289416 CHIC1Q5VXU3 224 aa10.21□□□□□ -0.78
ACSM3-201ENST00000289416 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
ACSM3-201ENST00000289416 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
ACSM3-201ENST00000289416 PHF23Q9BUL5 403 aaPredicted RBP9.23□□□□□ -0.93
ACSM3-201ENST00000289416 POTEDQ86YR6 584 aa9.11□□□□□ -0.95
ACSM3-201ENST00000289416 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
ACSM3-201ENST00000289416 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
ACSM3-201ENST00000289416 CCDC180Q9P1Z9 1646 aa8.46□□□□□ -1.06
ACSM3-201ENST00000289416 KCNA4P22459 653 aa8.32□□□□□ -1.08
ACSM3-201ENST00000289416 SENP3Q9H4L4 574 aaPredicted RBP8.29□□□□□ -1.08
ACSM3-201ENST00000289416 ADRA2BP18089 450 aa8.28□□□□□ -1.08
ACSM3-201ENST00000289416 CSRNP3Q8WYN3 585 aa8.11□□□□□ -1.11
ACSM3-201ENST00000289416 ABCC9O60706 1549 aa8.06□□□□□ -1.12
ACSM3-201ENST00000289416 PPP6R1Q9UPN7 881 aa8.03□□□□□ -1.12
ACSM3-201ENST00000289416 ZCCHC6Q5VYS8 1495 aaKnown RBP8□□□□□ -1.13
ACSM3-201ENST00000289416 DCAF1Q9Y4B6 1507 aa7.94□□□□□ -1.14
ACSM3-201ENST00000289416 SLC24A1O60721 1099 aa7.94□□□□□ -1.14
ACSM3-201ENST00000289416 MYO15BQ96JP2 1530 aa7.92□□□□□ -1.14
ACSM3-201ENST00000289416 SLC4A1APQ9BWU0 796 aaKnown RBP7.91□□□□□ -1.14
ACSM3-201ENST00000289416 NACADO15069 1562 aa7.9□□□□□ -1.14
ACSM3-201ENST00000289416 RB1CC1Q8TDY2 1594 aa7.87□□□□□ -1.15
ACSM3-201ENST00000289416 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
ACSM3-201ENST00000289416 RTN4Q9NQC3 1192 aaKnown RBP7.81□□□□□ -1.16
ACSM3-201ENST00000289416 MSH5O43196 834 aa7.8□□□□□ -1.16
ACSM3-201ENST00000289416 ZBTB22O15209 634 aa7.74□□□□□ -1.17
ACSM3-201ENST00000289416 FOXD1Q16676 465 aa7.71□□□□□ -1.17
ACSM3-201ENST00000289416 SCRIBQ14160 1630 aa7.67□□□□□ -1.18
ACSM3-201ENST00000289416 PPP4R3CPQ6ZMV5 832 aa7.67□□□□□ -1.18
ACSM3-201ENST00000289416 UNC13AQ9UPW8 1703 aa7.67□□□□□ -1.18
ACSM3-201ENST00000289416 BICRAQ9NZM4 1560 aa7.6□□□□□ -1.19
ACSM3-201ENST00000289416 SHROOM4Q9ULL8 1493 aa7.6□□□□□ -1.19
ACSM3-201ENST00000289416 NPM3O75607 178 aaKnown RBP7.58□□□□□ -1.2
ACSM3-201ENST00000289416 PABPN1Q86U42 306 aaKnown RBP eCLIP7.53□□□□□ -1.2
ACSM3-201ENST00000289416 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
ACSM3-201ENST00000289416 NCBP3Q53F19 620 aaKnown RBP7.45□□□□□ -1.22
ACSM3-201ENST00000289416 BAZ1AQ9NRL2 1556 aaPredicted RBP7.4□□□□□ -1.22
ACSM3-201ENST00000289416 PIAS4Q8N2W9 510 aaPredicted RBP7.4□□□□□ -1.22
ACSM3-201ENST00000289416 EIF4G1Q04637 1599 aaKnown RBP7.39□□□□□ -1.23
ACSM3-201ENST00000289416 CECR2Q9BXF3 1484 aa7.39□□□□□ -1.23
ACSM3-201ENST00000289416 SMARCA4P51532 1647 aa7.38□□□□□ -1.23
ACSM3-201ENST00000289416 MROH2BQ7Z745 1585 aa7.34□□□□□ -1.23
ACSM3-201ENST00000289416 PEG3Q9GZU2 1588 aa7.32□□□□□ -1.24
ACSM3-201ENST00000289416 RSF1Q96T23 1441 aaPredicted RBP7.32□□□□□ -1.24
ACSM3-201ENST00000289416 SMARCA2P51531 1590 aa7.31□□□□□ -1.24
ACSM3-201ENST00000289416 CC2D2AQ9P2K1 1620 aa7.31□□□□□ -1.24
ACSM3-201ENST00000289416 FOXD4L1Q9NU39 408 aa7.29□□□□□ -1.24
ACSM3-201ENST00000289416 ATAD2BQ9ULI0 1458 aa7.29□□□□□ -1.24
ACSM3-201ENST00000289416 FKBP8Q14318 412 aa7.29□□□□□ -1.24
ACSM3-201ENST00000289416 NCAPD3P42695 1498 aa7.28□□□□□ -1.24
ACSM3-201ENST00000289416 HMGXB3Q12766 1538 aa7.27□□□□□ -1.25
ACSM3-201ENST00000289416 WIZO95785 1651 aa7.27□□□□□ -1.25
ACSM3-201ENST00000289416 BAZ1BQ9UIG0 1483 aaKnown RBP7.24□□□□□ -1.25
ACSM3-201ENST00000289416 PRKCSHP14314 528 aaPredicted RBP7.24□□□□□ -1.25
ACSM3-201ENST00000289416 TOP2AP11388 1531 aaKnown RBP7.23□□□□□ -1.25
ACSM3-201ENST00000289416 DNAJC5BQ9UF47 199 aa7.22□□□□□ -1.25
ACSM3-201ENST00000289416 SUPT5HO00267 1087 aaKnown RBP7.21□□□□□ -1.25
ACSM3-201ENST00000289416 CNKSR2Q8WXI2 1034 aa7.21□□□□□ -1.26
ACSM3-201ENST00000289416 CACNB1Q02641 598 aaPredicted RBP7.19□□□□□ -1.26
ACSM3-201ENST00000289416 MAPK8IP2Q13387 824 aaPredicted RBP7.17□□□□□ -1.26
ACSM3-201ENST00000289416 CCDC88BA6NC98 1476 aa7.12□□□□□ -1.27
ACSM3-201ENST00000289416 LAMC3Q9Y6N6 1575 aa7.07□□□□□ -1.28
ACSM3-201ENST00000289416 CADPSQ9ULU8 1353 aa7.06□□□□□ -1.28
ACSM3-201ENST00000289416 CFTRP13569 1480 aa7.06□□□□□ -1.28
ACSM3-201ENST00000289416 SLC4A2P04920 1241 aa7.05□□□□□ -1.28
ACSM3-201ENST00000289416 PRDM2Q13029 1718 aa7.05□□□□□ -1.28
ACSM3-201ENST00000289416 NESP48681 1621 aa7.01□□□□□ -1.29
ACSM3-201ENST00000289416 PDS5BQ9NTI5 1447 aa7.01□□□□□ -1.29
ACSM3-201ENST00000289416 PLCB2Q00722 1185 aa7□□□□□ -1.29
ACSM3-201ENST00000289416 HAP1P54257 671 aaPredicted RBP6.99□□□□□ -1.29
ACSM3-201ENST00000289416 FANCD2Q9BXW9 1451 aa6.98□□□□□ -1.29
ACSM3-201ENST00000289416 POTEHQ6S545 545 aa6.98□□□□□ -1.29
ACSM3-201ENST00000289416 SCAF1Q9H7N4 1312 aaKnown RBP6.97□□□□□ -1.29
ACSM3-201ENST00000289416 CEP164Q9UPV0 1460 aa6.96□□□□□ -1.29
ACSM3-201ENST00000289416 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
ACSM3-201ENST00000289416 TAOK2Q9UL54 1235 aa6.95□□□□□ -1.3
ACSM3-201ENST00000289416 ERCC6Q03468 1493 aa6.95□□□□□ -1.3
ACSM3-201ENST00000289416 ABCC8Q09428 1581 aa6.93□□□□□ -1.3
ACSM3-201ENST00000289416 MRC2Q9UBG0 1479 aa6.92□□□□□ -1.3
ACSM3-201ENST00000289416 ATF5Q9Y2D1 282 aaPredicted RBP6.91□□□□□ -1.3
ACSM3-201ENST00000289416 WRNQ14191 1432 aaPredicted RBP eCLIP6.91□□□□□ -1.3
ACSM3-201ENST00000289416 DNMBPQ6XZF7 1577 aa6.91□□□□□ -1.3
ACSM3-201ENST00000289416 THOC2Q8NI27 1593 aaKnown RBP6.91□□□□□ -1.3
ACSM3-201ENST00000289416 RNF216Q9NWF9 866 aaPredicted RBP6.91□□□□□ -1.3
ACSM3-201ENST00000289416 TPRNQ4KMQ1 711 aa6.9□□□□□ -1.3
ACSM3-201ENST00000289416 WDR62O43379 1518 aa6.9□□□□□ -1.31
ACSM3-201ENST00000289416 BIVM-ERCC5R4GMW8 1640 aa6.89□□□□□ -1.31
ACSM3-201ENST00000289416 URB2Q14146 1524 aaKnown RBP6.89□□□□□ -1.31
ACSM3-201ENST00000289416 TOP2BQ02880 1626 aa6.89□□□□□ -1.31
ACSM3-201ENST00000289416 CUX1P39880 1505 aa6.89□□□□□ -1.31
ACSM3-201ENST00000289416 TOPBP1Q92547 1522 aa6.89□□□□□ -1.31
ACSM3-201ENST00000289416 BCANQ96GW7 911 aa6.87□□□□□ -1.31
ACSM3-201ENST00000289416 SYNJ1O43426 1573 aa6.87□□□□□ -1.31
ACSM3-201ENST00000289416 CUX2O14529 1486 aa6.85□□□□□ -1.31
ACSM3-201ENST00000289416 FGD5Q6ZNL6 1462 aa6.84□□□□□ -1.31
ACSM3-201ENST00000289416 MYCNP04198 464 aaPredicted RBP6.84□□□□□ -1.31
ACSM3-201ENST00000289416 FBLN2P98095 1184 aa6.84□□□□□ -1.31
ACSM3-201ENST00000289416 POLA1P09884 1462 aaPredicted RBP6.84□□□□□ -1.32
ACSM3-201ENST00000289416 TRIM41Q8WV44 630 aa6.83□□□□□ -1.32
ACSM3-201ENST00000289416 KDM2AQ9Y2K7 1162 aa6.82□□□□□ -1.32
ACSM3-201ENST00000289416 IFT140Q96RY7 1462 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms