Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.64■□□□□ 0.96e-8■■■□□ 16.4
SND1Q7KZF4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.789e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-207ENST00000525607 1773 ntTSL 219.59■□□□□ 0.736e-8■■■□□ 16.4
SND1Q7KZF4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.653e-7■■■□□ 16.4
SND1Q7KZF4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.396e-8■■■□□ 16.4
SND1Q7KZF4 SUSD2-202ENST00000463101 4938 ntTSL 215.95■□□□□ 0.149e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.75■□□□□ 0.116e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.016e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-215ENST00000529464 932 ntTSL 1 (best)14.68□□□□□ -0.066e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.23□□□□□ -0.136e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-219ENST00000531249 768 ntTSL 214.15□□□□□ -0.145e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-204ENST00000525283 898 ntTSL 313.08□□□□□ -0.326e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC12.84□□□□□ -0.353e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC11.25□□□□□ -0.616e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC9.62□□□□□ -0.873e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-221ENST00000532266 583 ntTSL 58.96□□□□□ -0.984e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.42□□□□□ -1.066e-8■■■□□ 16.4
SND1Q7KZF4 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.36□□□□□ -1.233e-8■■■□□ 16.4
SND1Q7KZF4 CD63-203ENST00000546457 607 ntTSL 214.42□□□□□ -0.14e-15■■■□□ 16.4
SND1Q7KZF4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.983e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.733e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.373e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC9.75□□□□□ -0.853e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.82□□□□□ -1.323e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.353e-10■■■□□ 16.4
SND1Q7KZF4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.1□□□□□ -1.593e-10■■■□□ 16.4
SND1Q7KZF4 ATP2A2-206ENST00000547792 541 ntTSL 410.13□□□□□ -0.795e-9■■■□□ 16.4
SND1Q7KZF4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.022e-6■■■□□ 16.4
SND1Q7KZF4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.082e-6■■■□□ 16.4
SND1Q7KZF4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.351e-8■■■□□ 16.4
SND1Q7KZF4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.89■□□□□ 0.131e-8■■■□□ 16.4
SND1Q7KZF4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.72■□□□□ 0.111e-8■■■□□ 16.4
SND1Q7KZF4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.011e-8■■■□□ 16.4
SND1Q7KZF4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.031e-8■■■□□ 16.4
SND1Q7KZF4 RHD-208ENST00000564398 1441 ntTSL 1 (best)14.49□□□□□ -0.091e-8■■■□□ 16.4
SND1Q7KZF4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.34□□□□□ -0.111e-8■■■□□ 16.4
SND1Q7KZF4 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.371e-8■■■□□ 16.4
SND1Q7KZF4 RHD-210ENST00000622561 3007 ntTSL 5 BASIC12.7□□□□□ -0.381e-8■■■□□ 16.4
SND1Q7KZF4 RHD-205ENST00000423253 951 ntTSL 511.39□□□□□ -0.591e-8■■■□□ 16.4
SND1Q7KZF4 LAMB2-208ENST00000477701 559 ntTSL 214.2□□□□□ -0.141e-7■■■□□ 16.4
SND1Q7KZF4 ADAM10-207ENST00000470269 1693 ntTSL 1 (best)6.15□□□□□ -1.425e-7■■■□□ 16.4
SND1Q7KZF4 EMC1-205ENST00000467423 589 ntTSL 212.57□□□□□ -0.43e-16■■■□□ 16.4
SND1Q7KZF4 PCMT1-207ENST00000484601 1095 ntTSL 518.55■□□□□ 0.561e-9■■■□□ 16.4
SND1Q7KZF4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.01■□□□□ 0.476e-7■■■□□ 16.4
SND1Q7KZF4 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.576e-7■■■□□ 16.4
SND1Q7KZF4 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC10.24□□□□□ -0.776e-7■■■□□ 16.4
SND1Q7KZF4 ADAM10-202ENST00000396136 2418 ntTSL 1 (best)5.06□□□□□ -1.66e-7■■■□□ 16.4
SND1Q7KZF4 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.364e-7■■■□□ 16.4
SND1Q7KZF4 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.814e-7■■■□□ 16.4
SND1Q7KZF4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.745e-7■■■□□ 16.4
SND1Q7KZF4 BCAT1-205ENST00000539282 1811 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.415e-7■■■□□ 16.4
SND1Q7KZF4 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.615e-7■■■□□ 16.4
SND1Q7KZF4 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC9.19□□□□□ -0.945e-7■■■□□ 16.4
SND1Q7KZF4 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.83□□□□□ -15e-7■■■□□ 16.4
SND1Q7KZF4 PRCP-209ENST00000531128 546 ntTSL 58.54□□□□□ -1.043e-7■■■□□ 16.3
SND1Q7KZF4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.73■□□□□ 0.432e-6■■■□□ 16.3
SND1Q7KZF4 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.48□□□□□ -0.252e-6■■■□□ 16.3
SND1Q7KZF4 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC11.97□□□□□ -0.492e-6■■■□□ 16.3
SND1Q7KZF4 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC11.63□□□□□ -0.552e-6■■■□□ 16.3
SND1Q7KZF4 FAM238C-205ENST00000640641 391 ntBASIC9.18□□□□□ -0.942e-6■■■□□ 16.3
SND1Q7KZF4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.351e-8■■■□□ 16.3
SND1Q7KZF4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.651e-8■■■□□ 16.3
SND1Q7KZF4 EFHC1-204ENST00000491749 496 ntTSL 425.8■■□□□ 1.722e-7■■■□□ 16.3
SND1Q7KZF4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.59■□□□□ 0.732e-7■■■□□ 16.3
SND1Q7KZF4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.412e-7■■■□□ 16.3
SND1Q7KZF4 EFHC1-235ENST00000637849 2746 ntTSL 516.24■□□□□ 0.192e-7■■■□□ 16.3
SND1Q7KZF4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.08■□□□□ 0.162e-7■■■□□ 16.3
SND1Q7KZF4 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.542e-7■■■□□ 16.3
SND1Q7KZF4 FCGR2A-207ENST00000471026 731 ntTSL 38.24□□□□□ -1.092e-7■■■□□ 16.3
SND1Q7KZF4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.85■■□□□ 1.097e-8■■■□□ 16.3
SND1Q7KZF4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.597e-8■■■□□ 16.3
SND1Q7KZF4 ALB-208ENST00000495173 445 ntTSL 36.53□□□□□ -1.361e-323■■■□□ 16.3
SND1Q7KZF4 CLPTM1-206ENST00000586975 720 ntTSL 219.65■□□□□ 0.749e-11■■■□□ 16.3
SND1Q7KZF4 AGPAT5-204ENST00000523586 468 ntTSL 418.91■□□□□ 0.624e-7■■■□□ 16.3
SND1Q7KZF4 CLPTM1-211ENST00000589347 638 ntTSL 310.98□□□□□ -0.659e-11■■■□□ 16.3
SND1Q7KZF4 NAGPA-208ENST00000564397 3286 ntTSL 213.27□□□□□ -0.282e-7■■■□□ 16.3
SND1Q7KZF4 C3-206ENST00000596179 280 ntTSL 33.14□□□□□ -1.911e-323■■■□□ 16.3
SND1Q7KZF4 LMAN2-206ENST00000513877 823 ntTSL 217.82■□□□□ 0.441e-10■■■□□ 16.3
SND1Q7KZF4 VMP1-217ENST00000593168 558 ntTSL 313.98□□□□□ -0.175e-7■■■□□ 16.3
SND1Q7KZF4 SUN1-213ENST00000433212 3474 ntTSL 513.11□□□□□ -0.311e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-206ENST00000413171 4488 ntTSL 512.49□□□□□ -0.411e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-212ENST00000429178 3701 ntTSL 1 (best)12.32□□□□□ -0.441e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.61e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC10.99□□□□□ -0.651e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.721e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC10.31□□□□□ -0.761e-6■■■□□ 16.3
SND1Q7KZF4 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.791e-6■■■□□ 16.3
SND1Q7KZF4 YARS-207ENST00000481895 1018 ntTSL 520.75■□□□□ 0.911e-6■■■□□ 16.3
SND1Q7KZF4 YARS-210ENST00000616261 1167 ntTSL 5 BASIC9.37□□□□□ -0.911e-6■■■□□ 16.3
SND1Q7KZF4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.15■□□□□ 0.53e-6■■■□□ 16.3
SND1Q7KZF4 TM9SF2-202ENST00000463709 727 ntTSL 38.5□□□□□ -1.052e-7■■■□□ 16.3
SND1Q7KZF4 PDIA3-205ENST00000469684 374 ntTSL 316.91■□□□□ 0.33e-10■■■□□ 16.3
SND1Q7KZF4 HLA-G-206ENST00000478355 1525 nt21.94■■□□□ 1.12e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.082e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-207ENST00000478519 1175 nt20.93■□□□□ 0.942e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-202ENST00000376815 851 ntBASIC20.93■□□□□ 0.942e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-203ENST00000376818 1127 ntBASIC20.93■□□□□ 0.942e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.42■□□□□ 0.862e-8■■■□□ 16.3
SND1Q7KZF4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.53■□□□□ 0.722e-8■■■□□ 16.3
SND1Q7KZF4 FUCA2-203ENST00000451668 737 ntTSL 29.58□□□□□ -0.885e-7■■■□□ 16.3
Retrieved 100 of 13,567 protein–RNA pairs in 135.3 ms