RNA–Protein interactions for RNA: ENST00000477701.1

LAMB2-208, Transcript of laminin subunit beta 2, humanhuman

TSL 2

Gene LAMB2, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-208ENST00000477701 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
LAMB2-208ENST00000477701 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
LAMB2-208ENST00000477701 ABCC9O60706 1549 aa30.27■■■□□ 2.44
LAMB2-208ENST00000477701 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
LAMB2-208ENST00000477701 NACADO15069 1562 aa28.57■■■□□ 2.16
LAMB2-208ENST00000477701 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
LAMB2-208ENST00000477701 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
LAMB2-208ENST00000477701 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
LAMB2-208ENST00000477701 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
LAMB2-208ENST00000477701 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
LAMB2-208ENST00000477701 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
LAMB2-208ENST00000477701 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
LAMB2-208ENST00000477701 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
LAMB2-208ENST00000477701 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
LAMB2-208ENST00000477701 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
LAMB2-208ENST00000477701 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
LAMB2-208ENST00000477701 EIF4G1Q04637 1599 aaKnown RBP27.28■■□□□ 1.96
LAMB2-208ENST00000477701 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
LAMB2-208ENST00000477701 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
LAMB2-208ENST00000477701 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
LAMB2-208ENST00000477701 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
LAMB2-208ENST00000477701 SMARCA2P51531 1590 aa26.25■■□□□ 1.79
LAMB2-208ENST00000477701 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
LAMB2-208ENST00000477701 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
LAMB2-208ENST00000477701 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
LAMB2-208ENST00000477701 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.77
LAMB2-208ENST00000477701 CUX2O14529 1486 aa26.04■■□□□ 1.76
LAMB2-208ENST00000477701 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
LAMB2-208ENST00000477701 NESP48681 1621 aa25.99■■□□□ 1.75
LAMB2-208ENST00000477701 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
LAMB2-208ENST00000477701 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
LAMB2-208ENST00000477701 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
LAMB2-208ENST00000477701 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
LAMB2-208ENST00000477701 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
LAMB2-208ENST00000477701 WIZO95785 1651 aa25.71■■□□□ 1.71
LAMB2-208ENST00000477701 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
LAMB2-208ENST00000477701 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
LAMB2-208ENST00000477701 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
LAMB2-208ENST00000477701 WDR62O43379 1518 aa25.38■■□□□ 1.65
LAMB2-208ENST00000477701 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
LAMB2-208ENST00000477701 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
LAMB2-208ENST00000477701 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
LAMB2-208ENST00000477701 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
LAMB2-208ENST00000477701 CFTRP13569 1480 aa25.25■■□□□ 1.63
LAMB2-208ENST00000477701 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
LAMB2-208ENST00000477701 URB2Q14146 1524 aaKnown RBP25.1■■□□□ 1.61
LAMB2-208ENST00000477701 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
LAMB2-208ENST00000477701 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
LAMB2-208ENST00000477701 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
LAMB2-208ENST00000477701 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
LAMB2-208ENST00000477701 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
LAMB2-208ENST00000477701 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
LAMB2-208ENST00000477701 DNMBPQ6XZF7 1577 aa24.76■■□□□ 1.55
LAMB2-208ENST00000477701 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
LAMB2-208ENST00000477701 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
LAMB2-208ENST00000477701 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
LAMB2-208ENST00000477701 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
LAMB2-208ENST00000477701 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
LAMB2-208ENST00000477701 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
LAMB2-208ENST00000477701 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
LAMB2-208ENST00000477701 CHD1O14646 1710 aa24.58■■□□□ 1.53
LAMB2-208ENST00000477701 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
LAMB2-208ENST00000477701 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
LAMB2-208ENST00000477701 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
LAMB2-208ENST00000477701 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
LAMB2-208ENST00000477701 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
LAMB2-208ENST00000477701 SOGA1O94964 1423 aa24.42■■□□□ 1.5
LAMB2-208ENST00000477701 CUX1P39880 1505 aa24.4■■□□□ 1.5
LAMB2-208ENST00000477701 FBLN2P98095 1184 aa24.4■■□□□ 1.5
LAMB2-208ENST00000477701 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
LAMB2-208ENST00000477701 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
LAMB2-208ENST00000477701 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
LAMB2-208ENST00000477701 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
LAMB2-208ENST00000477701 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
LAMB2-208ENST00000477701 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
LAMB2-208ENST00000477701 CYB5RLQ6IPT4 315 aa24.24■■□□□ 1.47
LAMB2-208ENST00000477701 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
LAMB2-208ENST00000477701 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LAMB2-208ENST00000477701 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
LAMB2-208ENST00000477701 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
LAMB2-208ENST00000477701 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
LAMB2-208ENST00000477701 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
LAMB2-208ENST00000477701 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
LAMB2-208ENST00000477701 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
LAMB2-208ENST00000477701 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
LAMB2-208ENST00000477701 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
LAMB2-208ENST00000477701 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
LAMB2-208ENST00000477701 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
LAMB2-208ENST00000477701 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
LAMB2-208ENST00000477701 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
LAMB2-208ENST00000477701 CEP170Q5SW79 1584 aa23.89■■□□□ 1.41
LAMB2-208ENST00000477701 ERCC6L2Q5T890 1561 aa23.84■■□□□ 1.41
LAMB2-208ENST00000477701 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
LAMB2-208ENST00000477701 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
LAMB2-208ENST00000477701 NUP160Q12769 1436 aa23.82■■□□□ 1.4
LAMB2-208ENST00000477701 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
LAMB2-208ENST00000477701 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
LAMB2-208ENST00000477701 PRG4Q92954 1404 aaPredicted RBP23.61■■□□□ 1.37
LAMB2-208ENST00000477701 CUL7Q14999 1698 aa23.56■■□□□ 1.36
LAMB2-208ENST00000477701 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms