RNA–Protein interactions for RNA: ENST00000457054.6

PDCD6IP-206, Transcript of programmed cell death 6 interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6IP, Length 5,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-206ENST00000457054 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
PDCD6IP-206ENST00000457054 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
PDCD6IP-206ENST00000457054 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
PDCD6IP-206ENST00000457054 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
PDCD6IP-206ENST00000457054 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
PDCD6IP-206ENST00000457054 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
PDCD6IP-206ENST00000457054 APLP2Q06481 763 aa18.37■□□□□ 0.53
PDCD6IP-206ENST00000457054 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
PDCD6IP-206ENST00000457054 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.48
PDCD6IP-206ENST00000457054 MYT1LQ9UL68 1186 aa17.9■□□□□ 0.46
PDCD6IP-206ENST00000457054 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
PDCD6IP-206ENST00000457054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
PDCD6IP-206ENST00000457054 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
PDCD6IP-206ENST00000457054 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
PDCD6IP-206ENST00000457054 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
PDCD6IP-206ENST00000457054 UBTFP17480 764 aaKnown RBP17.5■□□□□ 0.39
PDCD6IP-206ENST00000457054 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
PDCD6IP-206ENST00000457054 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
PDCD6IP-206ENST00000457054 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
PDCD6IP-206ENST00000457054 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDCD6IP-206ENST00000457054 FBLN2P98095 1184 aa17.1■□□□□ 0.33
PDCD6IP-206ENST00000457054 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
PDCD6IP-206ENST00000457054 ABCC9O60706 1549 aa17.04■□□□□ 0.32
PDCD6IP-206ENST00000457054 ITGAEP38570 1179 aa17■□□□□ 0.31
PDCD6IP-206ENST00000457054 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
PDCD6IP-206ENST00000457054 BCANQ96GW7 911 aa16.91■□□□□ 0.3
PDCD6IP-206ENST00000457054 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
PDCD6IP-206ENST00000457054 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
PDCD6IP-206ENST00000457054 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
PDCD6IP-206ENST00000457054 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
PDCD6IP-206ENST00000457054 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
PDCD6IP-206ENST00000457054 NEFLP07196 543 aa16.69■□□□□ 0.26
PDCD6IP-206ENST00000457054 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
PDCD6IP-206ENST00000457054 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
PDCD6IP-206ENST00000457054 TRIM52Q96A61 297 aa16.59■□□□□ 0.25
PDCD6IP-206ENST00000457054 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
PDCD6IP-206ENST00000457054 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
PDCD6IP-206ENST00000457054 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
PDCD6IP-206ENST00000457054 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
PDCD6IP-206ENST00000457054 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
PDCD6IP-206ENST00000457054 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
PDCD6IP-206ENST00000457054 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
PDCD6IP-206ENST00000457054 ZNF326Q5BKZ1 582 aaKnown RBP16.41■□□□□ 0.22
PDCD6IP-206ENST00000457054 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
PDCD6IP-206ENST00000457054 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
PDCD6IP-206ENST00000457054 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
PDCD6IP-206ENST00000457054 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
PDCD6IP-206ENST00000457054 NEFMP07197 916 aa16.29■□□□□ 0.2
PDCD6IP-206ENST00000457054 A0A0G2JS52 829 aa16.28■□□□□ 0.2
PDCD6IP-206ENST00000457054 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
PDCD6IP-206ENST00000457054 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.19
PDCD6IP-206ENST00000457054 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
PDCD6IP-206ENST00000457054 BCL11AQ9H165 835 aa16.22■□□□□ 0.19
PDCD6IP-206ENST00000457054 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
PDCD6IP-206ENST00000457054 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
PDCD6IP-206ENST00000457054 ARID4BQ4LE39 1312 aaPredicted RBP16.15■□□□□ 0.18
PDCD6IP-206ENST00000457054 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
PDCD6IP-206ENST00000457054 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
PDCD6IP-206ENST00000457054 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
PDCD6IP-206ENST00000457054 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
PDCD6IP-206ENST00000457054 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
PDCD6IP-206ENST00000457054 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
PDCD6IP-206ENST00000457054 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
PDCD6IP-206ENST00000457054 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
PDCD6IP-206ENST00000457054 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
PDCD6IP-206ENST00000457054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■□□□□ 9.1
PDCD6IP-206ENST00000457054 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
PDCD6IP-206ENST00000457054 NPM2Q86SE8 214 aaKnown RBP15.97■□□□□ 0.15
PDCD6IP-206ENST00000457054 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
PDCD6IP-206ENST00000457054 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
PDCD6IP-206ENST00000457054 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
PDCD6IP-206ENST00000457054 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
PDCD6IP-206ENST00000457054 MYT1Q01538 1121 aa15.89■□□□□ 0.13
PDCD6IP-206ENST00000457054 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.13
PDCD6IP-206ENST00000457054 TSPY4P0CV99 314 aa15.78■□□□□ 0.12
PDCD6IP-206ENST00000457054 TSPY10P0CW01 314 aa15.78■□□□□ 0.12
PDCD6IP-206ENST00000457054 ANP32CO43423 234 aa15.74■□□□□ 0.11
PDCD6IP-206ENST00000457054 LMOD2Q6P5Q4 547 aa15.74■□□□□ 0.11
PDCD6IP-206ENST00000457054 ARXQ96QS3 562 aa15.74■□□□□ 0.11
PDCD6IP-206ENST00000457054 NPHP1O15259 732 aa15.71■□□□□ 0.1
PDCD6IP-206ENST00000457054 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
PDCD6IP-206ENST00000457054 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
PDCD6IP-206ENST00000457054 MLECQ14165 292 aa15.65■□□□□ 0.1
PDCD6IP-206ENST00000457054 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
PDCD6IP-206ENST00000457054 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
PDCD6IP-206ENST00000457054 HRCP23327 699 aa15.58■□□□□ 0.08
PDCD6IP-206ENST00000457054 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
PDCD6IP-206ENST00000457054 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
PDCD6IP-206ENST00000457054 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.07
PDCD6IP-206ENST00000457054 TMC1Q8TDI8 760 aa15.5■□□□□ 0.07
PDCD6IP-206ENST00000457054 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
PDCD6IP-206ENST00000457054 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDCD6IP-206ENST00000457054 CCDC9Q9Y3X0 531 aaKnown RBP15.44■□□□□ 0.06
PDCD6IP-206ENST00000457054 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
PDCD6IP-206ENST00000457054 POGKQ9P215 609 aa15.43■□□□□ 0.06
PDCD6IP-206ENST00000457054 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
PDCD6IP-206ENST00000457054 HDGFP51858 240 aaKnown RBP15.42■□□□□ 0.06
PDCD6IP-206ENST00000457054 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
PDCD6IP-206ENST00000457054 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
PDCD6IP-206ENST00000457054 HSP90AA1P07900 732 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms