RNA–Protein interactions for RNA: ENST00000637849.1

EFHC1-235, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 2,746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-235ENST00000637849 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
EFHC1-235ENST00000637849 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
EFHC1-235ENST00000637849 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
EFHC1-235ENST00000637849 ABCC9O60706 1549 aa30■■■□□ 2.39
EFHC1-235ENST00000637849 DCAF1Q9Y4B6 1507 aa29.94■■■□□ 2.38
EFHC1-235ENST00000637849 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.34
EFHC1-235ENST00000637849 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.34
EFHC1-235ENST00000637849 NACADO15069 1562 aa29.52■■■□□ 2.32
EFHC1-235ENST00000637849 RB1CC1Q8TDY2 1594 aa29.29■■■□□ 2.28
EFHC1-235ENST00000637849 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
EFHC1-235ENST00000637849 SCRIBQ14160 1630 aa28.94■■■□□ 2.22
EFHC1-235ENST00000637849 UNC13AQ9UPW8 1703 aa28.68■■■□□ 2.18
EFHC1-235ENST00000637849 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
EFHC1-235ENST00000637849 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
EFHC1-235ENST00000637849 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
EFHC1-235ENST00000637849 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
EFHC1-235ENST00000637849 RSF1Q96T23 1441 aaPredicted RBP27.89■■■□□ 2.06
EFHC1-235ENST00000637849 SUPT5HO00267 1087 aaKnown RBP27.88■■■□□ 2.05
EFHC1-235ENST00000637849 MROH2BQ7Z745 1585 aa27.85■■■□□ 2.05
EFHC1-235ENST00000637849 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
EFHC1-235ENST00000637849 WIZO95785 1651 aa27.59■■■□□ 2.01
EFHC1-235ENST00000637849 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
EFHC1-235ENST00000637849 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
EFHC1-235ENST00000637849 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
EFHC1-235ENST00000637849 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
EFHC1-235ENST00000637849 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
EFHC1-235ENST00000637849 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
EFHC1-235ENST00000637849 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
EFHC1-235ENST00000637849 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.94
EFHC1-235ENST00000637849 HMGXB3Q12766 1538 aa27.19■■□□□ 1.94
EFHC1-235ENST00000637849 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
EFHC1-235ENST00000637849 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
EFHC1-235ENST00000637849 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
EFHC1-235ENST00000637849 CFTRP13569 1480 aa26.56■■□□□ 1.84
EFHC1-235ENST00000637849 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
EFHC1-235ENST00000637849 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
EFHC1-235ENST00000637849 LAMC3Q9Y6N6 1575 aa26.35■■□□□ 1.81
EFHC1-235ENST00000637849 ABCC8Q09428 1581 aa26.34■■□□□ 1.81
EFHC1-235ENST00000637849 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
EFHC1-235ENST00000637849 NESP48681 1621 aa26.28■■□□□ 1.8
EFHC1-235ENST00000637849 WRNQ14191 1432 aaPredicted RBP eCLIP26.25■■□□□ 1.793e-6■■■■■ 51.5
EFHC1-235ENST00000637849 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
EFHC1-235ENST00000637849 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
EFHC1-235ENST00000637849 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
EFHC1-235ENST00000637849 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
EFHC1-235ENST00000637849 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
EFHC1-235ENST00000637849 CUX1P39880 1505 aa26.06■■□□□ 1.76
EFHC1-235ENST00000637849 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
EFHC1-235ENST00000637849 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
EFHC1-235ENST00000637849 DNMBPQ6XZF7 1577 aa25.93■■□□□ 1.74
EFHC1-235ENST00000637849 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
EFHC1-235ENST00000637849 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
EFHC1-235ENST00000637849 SOGA1O94964 1423 aa25.81■■□□□ 1.72
EFHC1-235ENST00000637849 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
EFHC1-235ENST00000637849 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
EFHC1-235ENST00000637849 EEA1Q15075 1411 aa25.79■■□□□ 1.72
EFHC1-235ENST00000637849 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
EFHC1-235ENST00000637849 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
EFHC1-235ENST00000637849 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
EFHC1-235ENST00000637849 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
EFHC1-235ENST00000637849 WDR62O43379 1518 aa25.7■■□□□ 1.7
EFHC1-235ENST00000637849 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
EFHC1-235ENST00000637849 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
EFHC1-235ENST00000637849 CSRNP3Q8WYN3 585 aa25.61■■□□□ 1.69
EFHC1-235ENST00000637849 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
EFHC1-235ENST00000637849 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
EFHC1-235ENST00000637849 CUX2O14529 1486 aa25.57■■□□□ 1.68
EFHC1-235ENST00000637849 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
EFHC1-235ENST00000637849 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
EFHC1-235ENST00000637849 TARBP1Q13395 1621 aaKnown RBP25.54■■□□□ 1.68
EFHC1-235ENST00000637849 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
EFHC1-235ENST00000637849 KIF21BO75037 1637 aa25.46■■□□□ 1.67
EFHC1-235ENST00000637849 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
EFHC1-235ENST00000637849 IGF1RP08069 1367 aa25.42■■□□□ 1.66
EFHC1-235ENST00000637849 PRXQ9BXM0 1461 aa25.41■■□□□ 1.66
EFHC1-235ENST00000637849 GOLGA3Q08378 1498 aa25.38■■□□□ 1.65
EFHC1-235ENST00000637849 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
EFHC1-235ENST00000637849 GAPVD1Q14C86 1478 aa25.35■■□□□ 1.65
EFHC1-235ENST00000637849 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
EFHC1-235ENST00000637849 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
EFHC1-235ENST00000637849 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
EFHC1-235ENST00000637849 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
EFHC1-235ENST00000637849 CUL7Q14999 1698 aa25.27■■□□□ 1.64
EFHC1-235ENST00000637849 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
EFHC1-235ENST00000637849 TNIKQ9UKE5 1360 aa25.27■■□□□ 1.64
EFHC1-235ENST00000637849 AQRO60306 1485 aaKnown RBP eCLIP25.26■■□□□ 1.63
EFHC1-235ENST00000637849 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
EFHC1-235ENST00000637849 EIF4G3O43432 1585 aaKnown RBP25.21■■□□□ 1.63
EFHC1-235ENST00000637849 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
EFHC1-235ENST00000637849 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
EFHC1-235ENST00000637849 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
EFHC1-235ENST00000637849 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
EFHC1-235ENST00000637849 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
EFHC1-235ENST00000637849 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
EFHC1-235ENST00000637849 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
EFHC1-235ENST00000637849 CLIP1P30622 1438 aa24.94■■□□□ 1.58
EFHC1-235ENST00000637849 SYNJ2O15056 1496 aa24.93■■□□□ 1.58
EFHC1-235ENST00000637849 CTTNBP2Q8WZ74 1663 aa24.93■■□□□ 1.58
EFHC1-235ENST00000637849 GRIN2AQ12879 1464 aa24.89■■□□□ 1.58
EFHC1-235ENST00000637849 CHMP7Q8WUX9 453 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms