RNA–Protein interactions for RNA: ENST00000423253.1

RHD-205, Transcript of Rh blood group D antigen, humanhuman

TSL 5

Gene RHD, Length 951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHD-205ENST00000423253 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
RHD-205ENST00000423253 ABCC9O60706 1549 aa26.08■■□□□ 1.77
RHD-205ENST00000423253 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
RHD-205ENST00000423253 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
RHD-205ENST00000423253 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
RHD-205ENST00000423253 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
RHD-205ENST00000423253 NACADO15069 1562 aa24.25■■□□□ 1.47
RHD-205ENST00000423253 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
RHD-205ENST00000423253 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
RHD-205ENST00000423253 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
RHD-205ENST00000423253 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
RHD-205ENST00000423253 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
RHD-205ENST00000423253 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
RHD-205ENST00000423253 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
RHD-205ENST00000423253 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
RHD-205ENST00000423253 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
RHD-205ENST00000423253 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
RHD-205ENST00000423253 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
RHD-205ENST00000423253 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
RHD-205ENST00000423253 CUX2O14529 1486 aa22.6■■□□□ 1.21
RHD-205ENST00000423253 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
RHD-205ENST00000423253 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
RHD-205ENST00000423253 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
RHD-205ENST00000423253 NESP48681 1621 aa22.3■■□□□ 1.16
RHD-205ENST00000423253 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
RHD-205ENST00000423253 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
RHD-205ENST00000423253 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
RHD-205ENST00000423253 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
RHD-205ENST00000423253 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
RHD-205ENST00000423253 TRIM41Q8WV44 630 aa22■■□□□ 1.11
RHD-205ENST00000423253 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.11
RHD-205ENST00000423253 KIF21AQ7Z4S6 1674 aa21.93■■□□□ 1.1
RHD-205ENST00000423253 BAZ1AQ9NRL2 1556 aaPredicted RBP21.93■■□□□ 1.1
RHD-205ENST00000423253 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
RHD-205ENST00000423253 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
RHD-205ENST00000423253 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
RHD-205ENST00000423253 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
RHD-205ENST00000423253 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
RHD-205ENST00000423253 WDR62O43379 1518 aa21.67■■□□□ 1.06
RHD-205ENST00000423253 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
RHD-205ENST00000423253 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.04
RHD-205ENST00000423253 WIZO95785 1651 aa21.52■■□□□ 1.04
RHD-205ENST00000423253 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
RHD-205ENST00000423253 CFTRP13569 1480 aa21.39■■□□□ 1.01
RHD-205ENST00000423253 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
RHD-205ENST00000423253 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
RHD-205ENST00000423253 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
RHD-205ENST00000423253 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
RHD-205ENST00000423253 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
RHD-205ENST00000423253 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
RHD-205ENST00000423253 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
RHD-205ENST00000423253 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
RHD-205ENST00000423253 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
RHD-205ENST00000423253 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
RHD-205ENST00000423253 PRDM2Q13029 1718 aa21.05■□□□□ 0.96
RHD-205ENST00000423253 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
RHD-205ENST00000423253 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
RHD-205ENST00000423253 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
RHD-205ENST00000423253 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
RHD-205ENST00000423253 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
RHD-205ENST00000423253 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
RHD-205ENST00000423253 CHD1O14646 1710 aa20.93■□□□□ 0.94
RHD-205ENST00000423253 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.93
RHD-205ENST00000423253 FBLN2P98095 1184 aa20.88■□□□□ 0.93
RHD-205ENST00000423253 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
RHD-205ENST00000423253 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
RHD-205ENST00000423253 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
RHD-205ENST00000423253 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
RHD-205ENST00000423253 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
RHD-205ENST00000423253 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
RHD-205ENST00000423253 SOGA1O94964 1423 aa20.69■□□□□ 0.9
RHD-205ENST00000423253 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
RHD-205ENST00000423253 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
RHD-205ENST00000423253 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
RHD-205ENST00000423253 FGD5Q6ZNL6 1462 aa20.58■□□□□ 0.89
RHD-205ENST00000423253 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
RHD-205ENST00000423253 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
RHD-205ENST00000423253 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
RHD-205ENST00000423253 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
RHD-205ENST00000423253 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
RHD-205ENST00000423253 CUX1P39880 1505 aa20.52■□□□□ 0.87
RHD-205ENST00000423253 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
RHD-205ENST00000423253 ERCC6L2Q5T890 1561 aa20.4■□□□□ 0.86
RHD-205ENST00000423253 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
RHD-205ENST00000423253 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
RHD-205ENST00000423253 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
RHD-205ENST00000423253 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
RHD-205ENST00000423253 CEP170Q5SW79 1584 aa20.26■□□□□ 0.83
RHD-205ENST00000423253 NUP160Q12769 1436 aa20.24■□□□□ 0.83
RHD-205ENST00000423253 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
RHD-205ENST00000423253 ADAMTS12P58397 1594 aa20.19■□□□□ 0.82
RHD-205ENST00000423253 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
RHD-205ENST00000423253 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
RHD-205ENST00000423253 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
RHD-205ENST00000423253 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
RHD-205ENST00000423253 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
RHD-205ENST00000423253 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
RHD-205ENST00000423253 ABCC10Q5T3U5 1492 aa20.03■□□□□ 0.8
RHD-205ENST00000423253 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
RHD-205ENST00000423253 KDM4FA0A1W2PPD8 638 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms