RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 NISCHQ9Y2I1 1504 aa46.82■■■■■ 5.09
CLPTM1-206ENST00000586975 CCDC180Q9P1Z9 1646 aa41.73■■■■■ 4.27
CLPTM1-206ENST00000586975 ABCC9O60706 1549 aa41.54■■■■■ 4.24
CLPTM1-206ENST00000586975 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.93
CLPTM1-206ENST00000586975 RB1CC1Q8TDY2 1594 aa39.61■■■■□ 3.93
CLPTM1-206ENST00000586975 NACADO15069 1562 aa39.42■■■■□ 3.9
CLPTM1-206ENST00000586975 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
CLPTM1-206ENST00000586975 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
CLPTM1-206ENST00000586975 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
CLPTM1-206ENST00000586975 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
CLPTM1-206ENST00000586975 DCAF1Q9Y4B6 1507 aa38.62■■■■□ 3.77
CLPTM1-206ENST00000586975 DNAJC5BQ9UF47 199 aa38.59■■■■□ 3.77
CLPTM1-206ENST00000586975 BICRAQ9NZM4 1560 aa38.4■■■■□ 3.74
CLPTM1-206ENST00000586975 SCRIBQ14160 1630 aa38.2■■■■□ 3.71
CLPTM1-206ENST00000586975 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
CLPTM1-206ENST00000586975 EIF4G1Q04637 1599 aaKnown RBP37.47■■■■□ 3.59
CLPTM1-206ENST00000586975 CC2D2AQ9P2K1 1620 aa37.45■■■■□ 3.59
CLPTM1-206ENST00000586975 CECR2Q9BXF3 1484 aa37.33■■■■□ 3.57
CLPTM1-206ENST00000586975 SMARCA4P51532 1647 aa36.41■■■■□ 3.42
CLPTM1-206ENST00000586975 NCAPD3P42695 1498 aa36.41■■■■□ 3.42
CLPTM1-206ENST00000586975 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
CLPTM1-206ENST00000586975 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
CLPTM1-206ENST00000586975 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
CLPTM1-206ENST00000586975 HMGXB3Q12766 1538 aa36.13■■■■□ 3.38
CLPTM1-206ENST00000586975 MROH2BQ7Z745 1585 aa36.11■■■■□ 3.37
CLPTM1-206ENST00000586975 BAZ1BQ9UIG0 1483 aaKnown RBP36.09■■■■□ 3.37
CLPTM1-206ENST00000586975 PEG3Q9GZU2 1588 aa35.99■■■■□ 3.35
CLPTM1-206ENST00000586975 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
CLPTM1-206ENST00000586975 NESP48681 1621 aa35.77■■■■□ 3.32
CLPTM1-206ENST00000586975 WIZO95785 1651 aa35.68■■■■□ 3.3
CLPTM1-206ENST00000586975 RSF1Q96T23 1441 aaPredicted RBP35.53■■■■□ 3.28
CLPTM1-206ENST00000586975 CUX2O14529 1486 aa35.53■■■■□ 3.28
CLPTM1-206ENST00000586975 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
CLPTM1-206ENST00000586975 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.25
CLPTM1-206ENST00000586975 PDS5BQ9NTI5 1447 aa35.37■■■■□ 3.25
CLPTM1-206ENST00000586975 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
CLPTM1-206ENST00000586975 TOP2AP11388 1531 aaKnown RBP35.24■■■■□ 3.23
CLPTM1-206ENST00000586975 THOC2Q8NI27 1593 aaKnown RBP35.22■■■■□ 3.23
CLPTM1-206ENST00000586975 DNAJC5Q9H3Z4 198 aa35.11■■■■□ 3.21
CLPTM1-206ENST00000586975 CFTRP13569 1480 aa35.02■■■■□ 3.2
CLPTM1-206ENST00000586975 MRC2Q9UBG0 1479 aa35.01■■■■□ 3.19
CLPTM1-206ENST00000586975 FANCD2Q9BXW9 1451 aa34.98■■■■□ 3.19
CLPTM1-206ENST00000586975 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
CLPTM1-206ENST00000586975 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
CLPTM1-206ENST00000586975 WDR62O43379 1518 aa34.86■■■■□ 3.17
CLPTM1-206ENST00000586975 URB2Q14146 1524 aaKnown RBP34.64■■■■□ 3.14
CLPTM1-206ENST00000586975 PRDM2Q13029 1718 aa34.57■■■■□ 3.12
CLPTM1-206ENST00000586975 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
CLPTM1-206ENST00000586975 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
CLPTM1-206ENST00000586975 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
CLPTM1-206ENST00000586975 IFT140Q96RY7 1462 aa34.24■■■■□ 3.07
CLPTM1-206ENST00000586975 DNMBPQ6XZF7 1577 aa34.22■■■■□ 3.07
CLPTM1-206ENST00000586975 ZNF608Q9ULD9 1512 aaPredicted RBP34.17■■■■□ 3.06
CLPTM1-206ENST00000586975 OSCARQ8IYS5 282 aa34.1■■■■□ 3.05
CLPTM1-206ENST00000586975 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.04
CLPTM1-206ENST00000586975 AQRO60306 1485 aaKnown RBP eCLIP33.95■■■■□ 3.033e-6■■■■□ 24.7
CLPTM1-206ENST00000586975 TARBP1Q13395 1621 aaKnown RBP33.95■■■■□ 3.03
CLPTM1-206ENST00000586975 RAD54L2Q9Y4B4 1467 aa33.95■■■■□ 3.02
CLPTM1-206ENST00000586975 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
CLPTM1-206ENST00000586975 SOGA1O94964 1423 aa33.93■■■■□ 3.02
CLPTM1-206ENST00000586975 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
CLPTM1-206ENST00000586975 CUX1P39880 1505 aa33.9■■■■□ 3.02
CLPTM1-206ENST00000586975 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
CLPTM1-206ENST00000586975 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
CLPTM1-206ENST00000586975 FBLN2P98095 1184 aa33.78■■■■□ 3
CLPTM1-206ENST00000586975 CHD1O14646 1710 aa33.59■■■□□ 2.97
CLPTM1-206ENST00000586975 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
CLPTM1-206ENST00000586975 WDR97A6NE52 1622 aa33.57■■■□□ 2.97
CLPTM1-206ENST00000586975 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
CLPTM1-206ENST00000586975 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
CLPTM1-206ENST00000586975 CHMP7Q8WUX9 453 aaPredicted RBP33.53■■■□□ 2.96
CLPTM1-206ENST00000586975 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
CLPTM1-206ENST00000586975 RIMBP3CA6NJZ7 1639 aa33.5■■■□□ 2.95
CLPTM1-206ENST00000586975 RIMBP3BA6NNM3 1639 aa33.5■■■□□ 2.95
CLPTM1-206ENST00000586975 RIMBP3Q9UFD9 1639 aa33.5■■■□□ 2.95
CLPTM1-206ENST00000586975 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
CLPTM1-206ENST00000586975 MAGI1Q96QZ7 1491 aaPredicted RBP33.47■■■□□ 2.95
CLPTM1-206ENST00000586975 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
CLPTM1-206ENST00000586975 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
CLPTM1-206ENST00000586975 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
CLPTM1-206ENST00000586975 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
CLPTM1-206ENST00000586975 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
CLPTM1-206ENST00000586975 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
CLPTM1-206ENST00000586975 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
CLPTM1-206ENST00000586975 CYB5RLQ6IPT4 315 aa33.33■■■□□ 2.93
CLPTM1-206ENST00000586975 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
CLPTM1-206ENST00000586975 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
CLPTM1-206ENST00000586975 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
CLPTM1-206ENST00000586975 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
CLPTM1-206ENST00000586975 FHAD1B1AJZ9 1412 aa33.08■■■□□ 2.89
CLPTM1-206ENST00000586975 ERICH3Q5RHP9 1530 aa33.06■■■□□ 2.88
CLPTM1-206ENST00000586975 NUP160Q12769 1436 aa32.95■■■□□ 2.87
CLPTM1-206ENST00000586975 CEP170Q5SW79 1584 aa32.94■■■□□ 2.86
CLPTM1-206ENST00000586975 KIF27Q86VH2 1401 aa32.88■■■□□ 2.85
CLPTM1-206ENST00000586975 TRHP20396 242 aaPredicted RBP32.88■■■□□ 2.85
CLPTM1-206ENST00000586975 IGF1RP08069 1367 aa32.81■■■□□ 2.84
CLPTM1-206ENST00000586975 ERCC6L2Q5T890 1561 aa32.79■■■□□ 2.84
CLPTM1-206ENST00000586975 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
CLPTM1-206ENST00000586975 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
CLPTM1-206ENST00000586975 PRG4Q92954 1404 aaPredicted RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms