RNA–Protein interactions for RNA: ENST00000547792.1

ATP2A2-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 4

Gene ATP2A2, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-206ENST00000547792 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
ATP2A2-206ENST00000547792 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
ATP2A2-206ENST00000547792 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
ATP2A2-206ENST00000547792 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
ATP2A2-206ENST00000547792 ABCC9O60706 1549 aa21.51■■□□□ 1.03
ATP2A2-206ENST00000547792 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
ATP2A2-206ENST00000547792 NACADO15069 1562 aa20.57■□□□□ 0.88
ATP2A2-206ENST00000547792 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
ATP2A2-206ENST00000547792 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
ATP2A2-206ENST00000547792 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
ATP2A2-206ENST00000547792 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
ATP2A2-206ENST00000547792 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
ATP2A2-206ENST00000547792 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
ATP2A2-206ENST00000547792 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
ATP2A2-206ENST00000547792 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
ATP2A2-206ENST00000547792 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
ATP2A2-206ENST00000547792 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
ATP2A2-206ENST00000547792 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.71
ATP2A2-206ENST00000547792 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
ATP2A2-206ENST00000547792 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
ATP2A2-206ENST00000547792 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
ATP2A2-206ENST00000547792 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
ATP2A2-206ENST00000547792 SMARCA4P51532 1647 aa19■□□□□ 0.63
ATP2A2-206ENST00000547792 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
ATP2A2-206ENST00000547792 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
ATP2A2-206ENST00000547792 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
ATP2A2-206ENST00000547792 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
ATP2A2-206ENST00000547792 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
ATP2A2-206ENST00000547792 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
ATP2A2-206ENST00000547792 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
ATP2A2-206ENST00000547792 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
ATP2A2-206ENST00000547792 WIZO95785 1651 aa18.6■□□□□ 0.57
ATP2A2-206ENST00000547792 NESP48681 1621 aa18.56■□□□□ 0.56
ATP2A2-206ENST00000547792 ERCC6Q03468 1493 aa18.56■□□□□ 0.56
ATP2A2-206ENST00000547792 LAMC3Q9Y6N6 1575 aa18.52■□□□□ 0.56
ATP2A2-206ENST00000547792 CUX2O14529 1486 aa18.49■□□□□ 0.55
ATP2A2-206ENST00000547792 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
ATP2A2-206ENST00000547792 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
ATP2A2-206ENST00000547792 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
ATP2A2-206ENST00000547792 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
ATP2A2-206ENST00000547792 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
ATP2A2-206ENST00000547792 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
ATP2A2-206ENST00000547792 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
ATP2A2-206ENST00000547792 CFTRP13569 1480 aa18.25■□□□□ 0.51
ATP2A2-206ENST00000547792 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
ATP2A2-206ENST00000547792 WDR62O43379 1518 aa18.18■□□□□ 0.5
ATP2A2-206ENST00000547792 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
ATP2A2-206ENST00000547792 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
ATP2A2-206ENST00000547792 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
ATP2A2-206ENST00000547792 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
ATP2A2-206ENST00000547792 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.47
ATP2A2-206ENST00000547792 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
ATP2A2-206ENST00000547792 FOXD1Q16676 465 aa17.87■□□□□ 0.45
ATP2A2-206ENST00000547792 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
ATP2A2-206ENST00000547792 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
ATP2A2-206ENST00000547792 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
ATP2A2-206ENST00000547792 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
ATP2A2-206ENST00000547792 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
ATP2A2-206ENST00000547792 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
ATP2A2-206ENST00000547792 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
ATP2A2-206ENST00000547792 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-206ENST00000547792 CUX1P39880 1505 aa17.65■□□□□ 0.42
ATP2A2-206ENST00000547792 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
ATP2A2-206ENST00000547792 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
ATP2A2-206ENST00000547792 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
ATP2A2-206ENST00000547792 SOGA1O94964 1423 aa17.6■□□□□ 0.41
ATP2A2-206ENST00000547792 WDR97A6NE52 1622 aa17.59■□□□□ 0.41
ATP2A2-206ENST00000547792 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■■□ 23.5
ATP2A2-206ENST00000547792 CHD1O14646 1710 aa17.53■□□□□ 0.4
ATP2A2-206ENST00000547792 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
ATP2A2-206ENST00000547792 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
ATP2A2-206ENST00000547792 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
ATP2A2-206ENST00000547792 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
ATP2A2-206ENST00000547792 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-206ENST00000547792 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
ATP2A2-206ENST00000547792 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
ATP2A2-206ENST00000547792 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
ATP2A2-206ENST00000547792 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
ATP2A2-206ENST00000547792 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
ATP2A2-206ENST00000547792 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
ATP2A2-206ENST00000547792 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
ATP2A2-206ENST00000547792 FBLN2P98095 1184 aa17.37■□□□□ 0.37
ATP2A2-206ENST00000547792 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
ATP2A2-206ENST00000547792 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
ATP2A2-206ENST00000547792 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.37
ATP2A2-206ENST00000547792 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
ATP2A2-206ENST00000547792 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
ATP2A2-206ENST00000547792 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
ATP2A2-206ENST00000547792 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
ATP2A2-206ENST00000547792 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
ATP2A2-206ENST00000547792 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
ATP2A2-206ENST00000547792 NUP160Q12769 1436 aa17.17■□□□□ 0.34
ATP2A2-206ENST00000547792 CYB5RLQ6IPT4 315 aa17.17■□□□□ 0.34
ATP2A2-206ENST00000547792 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
ATP2A2-206ENST00000547792 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms