Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPDEFO95238 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SPDEFO95238 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPDEFO95238 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPDEFO95238 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDEFO95238 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SPDEFO95238 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPDEFO95238 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPDEFO95238 ST7-AS1-201ENST00000456775 1889 ntBASIC22.03■■□□□ 1.12
SPDEFO95238 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPDEFO95238 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.02■■□□□ 1.12
SPDEFO95238 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.02■■□□□ 1.12
SPDEFO95238 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.02■■□□□ 1.11
SPDEFO95238 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDEFO95238 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SPDEFO95238 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPDEFO95238 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
SPDEFO95238 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDEFO95238 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SPDEFO95238 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDEFO95238 AL121749.1-202ENST00000609313 2153 ntBASIC21.99■■□□□ 1.11
SPDEFO95238 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SPDEFO95238 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.99■■□□□ 1.11
SPDEFO95238 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDEFO95238 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDEFO95238 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPDEFO95238 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.98■■□□□ 1.11
SPDEFO95238 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPDEFO95238 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.98■■□□□ 1.11
SPDEFO95238 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.98■■□□□ 1.11
SPDEFO95238 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SPDEFO95238 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPDEFO95238 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPDEFO95238 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SPDEFO95238 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPDEFO95238 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SPDEFO95238 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPDEFO95238 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SPDEFO95238 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SPDEFO95238 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.93■■□□□ 1.1
SPDEFO95238 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SPDEFO95238 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPDEFO95238 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.92■■□□□ 1.1
SPDEFO95238 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.92■■□□□ 1.1
SPDEFO95238 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.91■■□□□ 1.1
SPDEFO95238 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDEFO95238 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPDEFO95238 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPDEFO95238 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDEFO95238 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.9■■□□□ 1.1
SPDEFO95238 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.9■■□□□ 1.1
SPDEFO95238 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.9■■□□□ 1.1
SPDEFO95238 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SPDEFO95238 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDEFO95238 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.89■■□□□ 1.09
SPDEFO95238 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SPDEFO95238 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SPDEFO95238 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SPDEFO95238 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPDEFO95238 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SPDEFO95238 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SPDEFO95238 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPDEFO95238 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPDEFO95238 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPDEFO95238 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPDEFO95238 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPDEFO95238 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.85■■□□□ 1.09
SPDEFO95238 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SPDEFO95238 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SPDEFO95238 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SPDEFO95238 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPDEFO95238 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPDEFO95238 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPDEFO95238 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SPDEFO95238 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPDEFO95238 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPDEFO95238 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
SPDEFO95238 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPDEFO95238 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPDEFO95238 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SPDEFO95238 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.79■■□□□ 1.08
SPDEFO95238 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPDEFO95238 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.79■■□□□ 1.08
SPDEFO95238 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SPDEFO95238 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.78■■□□□ 1.08
SPDEFO95238 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.77■■□□□ 1.08
SPDEFO95238 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPDEFO95238 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPDEFO95238 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.76■■□□□ 1.07
SPDEFO95238 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.76■■□□□ 1.07
SPDEFO95238 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDEFO95238 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.75■■□□□ 1.07
SPDEFO95238 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPDEFO95238 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPDEFO95238 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms