Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.06■□□□□ 0.96
CLN5O75503 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLN5O75503 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.06■□□□□ 0.96
CLN5O75503 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLN5O75503 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLN5O75503 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLN5O75503 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLN5O75503 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLN5O75503 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CLN5O75503 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLN5O75503 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLN5O75503 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.03■□□□□ 0.96
CLN5O75503 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLN5O75503 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLN5O75503 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.02■□□□□ 0.96
CLN5O75503 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLN5O75503 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.02■□□□□ 0.96
CLN5O75503 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.02■□□□□ 0.96
CLN5O75503 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN5O75503 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLN5O75503 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.01■□□□□ 0.95
CLN5O75503 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21■□□□□ 0.95
CLN5O75503 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21■□□□□ 0.95
CLN5O75503 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLN5O75503 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21■□□□□ 0.95
CLN5O75503 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLN5O75503 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
CLN5O75503 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN5O75503 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLN5O75503 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLN5O75503 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CLN5O75503 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN5O75503 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.97■□□□□ 0.95
CLN5O75503 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLN5O75503 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLN5O75503 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLN5O75503 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLN5O75503 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLN5O75503 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN5O75503 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLN5O75503 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.94■□□□□ 0.94
CLN5O75503 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLN5O75503 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLN5O75503 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.92■□□□□ 0.94
CLN5O75503 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.92■□□□□ 0.94
CLN5O75503 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLN5O75503 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
CLN5O75503 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLN5O75503 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 ST7-AS1-201ENST00000456775 1889 ntBASIC20.9■□□□□ 0.94
CLN5O75503 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.9■□□□□ 0.94
CLN5O75503 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.9■□□□□ 0.94
CLN5O75503 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.9■□□□□ 0.94
CLN5O75503 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLN5O75503 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLN5O75503 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLN5O75503 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.89■□□□□ 0.93
CLN5O75503 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLN5O75503 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLN5O75503 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.88■□□□□ 0.93
CLN5O75503 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLN5O75503 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.88■□□□□ 0.93
CLN5O75503 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLN5O75503 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLN5O75503 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.87■□□□□ 0.93
CLN5O75503 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLN5O75503 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.86■□□□□ 0.93
CLN5O75503 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLN5O75503 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLN5O75503 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.84■□□□□ 0.93
CLN5O75503 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLN5O75503 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLN5O75503 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLN5O75503 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.83■□□□□ 0.92
CLN5O75503 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLN5O75503 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.81■□□□□ 0.92
CLN5O75503 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.81■□□□□ 0.92
CLN5O75503 WASH5P-204ENST00000632292 975 ntBASIC20.81■□□□□ 0.92
CLN5O75503 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLN5O75503 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLN5O75503 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms