Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 FDPS-204ENST00000461507 1022 ntTSL 211□□□□□ -0.652e-10■■■□□ 14.6
PRPF8Q6P2Q9 FDPS-209ENST00000471117 630 ntTSL 37.23□□□□□ -1.252e-10■■■□□ 14.6
PRPF8Q6P2Q9 CLASRP-207ENST00000587112 867 ntTSL 1 (best)10.85□□□□□ -0.672e-7■■■□□ 14.6
PRPF8Q6P2Q9 ASCC2-209ENST00000458594 2753 ntTSL 58.86□□□□□ -0.991e-6■■■□□ 14.6
PRPF8Q6P2Q9 PPP6R1-208ENST00000592242 574 ntTSL 410.62□□□□□ -0.714e-8■■■□□ 14.6
PRPF8Q6P2Q9 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC11.17□□□□□ -0.622e-6■■■□□ 14.6
PRPF8Q6P2Q9 PHF19-209ENST00000464712 553 ntTSL 45.59□□□□□ -1.512e-11■■■□□ 14.6
PRPF8Q6P2Q9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 11e-7■■■□□ 14.6
PRPF8Q6P2Q9 TAF10-204ENST00000532344 638 ntTSL 220.59■□□□□ 0.891e-7■■■□□ 14.6
PRPF8Q6P2Q9 TAF10-202ENST00000527248 425 ntTSL 316.5■□□□□ 0.231e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.83□□□□□ -0.034e-10■■■□□ 14.6
PRPF8Q6P2Q9 TAF10-203ENST00000531760 502 ntTSL 513.93□□□□□ -0.181e-7■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.58□□□□□ -0.564e-10■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)11.18□□□□□ -0.624e-10■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.794e-10■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.39□□□□□ -1.234e-10■■■□□ 14.6
PRPF8Q6P2Q9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.11□□□□□ -2.074e-10■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.456e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.21■□□□□ 0.356e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.136e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-213ENST00000541597 685 ntTSL 313.55□□□□□ -0.246e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.36e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.346e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-209ENST00000538227 577 ntTSL 212.78□□□□□ -0.366e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-217ENST00000543524 656 ntTSL 412.66□□□□□ -0.386e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.456e-7■■■□□ 14.6
PRPF8Q6P2Q9 PLEKHB1-212ENST00000540431 579 ntTSL 511.95□□□□□ -0.56e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-208ENST00000477440 587 ntTSL 321.53■■□□□ 1.042e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.482e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC10.51□□□□□ -0.732e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-207ENST00000473779 669 ntTSL 39.5□□□□□ -0.892e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-204ENST00000465659 2693 ntTSL 1 (best)9.46□□□□□ -0.92e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.12e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.27□□□□□ -1.412e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-215ENST00000498517 787 ntTSL 54.39□□□□□ -1.712e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.1□□□□□ -1.752e-7■■■□□ 14.6
PRPF8Q6P2Q9 ARHGEF3-210ENST00000481422 567 ntTSL 43.33□□□□□ -1.882e-7■■■□□ 14.6
PRPF8Q6P2Q9 UNC13D-213ENST00000590762 848 ntTSL 519.71■□□□□ 0.751e-8■■■□□ 14.6
PRPF8Q6P2Q9 UNC13D-217ENST00000592386 930 ntTSL 58.71□□□□□ -1.011e-8■■■□□ 14.6
PRPF8Q6P2Q9 XBP1-205ENST00000482720 520 ntTSL 217.97■□□□□ 0.473e-7■■■□□ 14.6
PRPF8Q6P2Q9 BRD9-211ENST00000494422 449 ntTSL 35.25□□□□□ -1.571e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZC3H12A-202ENST00000471012 395 ntTSL 310.98□□□□□ -0.653e-7■■■□□ 14.6
PRPF8Q6P2Q9 FBRS-204ENST00000482749 725 ntTSL 511.25□□□□□ -0.611e-7■■■□□ 14.6
PRPF8Q6P2Q9 EIF4A2-206ENST00000441007 480 ntTSL 311.89□□□□□ -0.512e-22■■■□□ 14.6
PRPF8Q6P2Q9 GORASP2-207ENST00000486498 2096 ntTSL 210.82□□□□□ -0.682e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.093e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-208ENST00000412591 571 ntTSL 413.76□□□□□ -0.213e-6■■■□□ 14.6
PRPF8Q6P2Q9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.376e-8■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.48□□□□□ -0.413e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.01□□□□□ -0.493e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC11.57□□□□□ -0.563e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.51□□□□□ -0.573e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.85□□□□□ -0.673e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-209ENST00000412922 1935 ntTSL 510.6□□□□□ -0.713e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.753e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC10.3□□□□□ -0.763e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-210ENST00000413197 2442 ntTSL 210.28□□□□□ -0.763e-6■■■□□ 14.6
PRPF8Q6P2Q9 COPS7B-214ENST00000449784 978 ntTSL 37.81□□□□□ -1.163e-6■■■□□ 14.6
PRPF8Q6P2Q9 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)13.18□□□□□ -0.32e-8■■■□□ 14.6
PRPF8Q6P2Q9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.3□□□□□ -0.762e-8■■■□□ 14.6
PRPF8Q6P2Q9 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.112e-8■■■□□ 14.6
PRPF8Q6P2Q9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.914e-12■■■□□ 14.6
PRPF8Q6P2Q9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.554e-12■■■□□ 14.6
PRPF8Q6P2Q9 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.564e-12■■■□□ 14.6
PRPF8Q6P2Q9 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)23.19■■□□□ 1.39e-9■■■□□ 14.6
PRPF8Q6P2Q9 RTKN-206ENST00000469859 496 ntTSL 314.42□□□□□ -0.16e-7■■■□□ 14.6
PRPF8Q6P2Q9 TRAPPC12-210ENST00000441983 683 ntTSL 312.68□□□□□ -0.381e-6■■■□□ 14.6
PRPF8Q6P2Q9 HDLBP-202ENST00000373292 3297 ntTSL 58.99□□□□□ -0.979e-9■■■□□ 14.6
PRPF8Q6P2Q9 L3MBTL1-219ENST00000497347 691 ntTSL 513.03□□□□□ -0.323e-11■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.09■□□□□ 0.171e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.88□□□□□ -0.351e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.65□□□□□ -0.391e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC10.06□□□□□ -0.81e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC7.8□□□□□ -1.161e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-234ENST00000413358 916 ntTSL 3 BASIC7.31□□□□□ -1.241e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.74□□□□□ -1.491e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC5.7□□□□□ -1.51e-7■■■□□ 14.6
PRPF8Q6P2Q9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.91□□□□□ -1.621e-7■■■□□ 14.6
PRPF8Q6P2Q9 EPS8L3-204ENST00000472325 1806 ntTSL 1 (best)11.27□□□□□ -0.615e-8■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-209ENST00000525281 1041 ntTSL 225.82■■□□□ 1.727e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-211ENST00000490316 713 ntTSL 324.92■■□□□ 1.587e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.237e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.32■■□□□ 1.167e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-206ENST00000463345 1655 ntTSL 1 (best)21.89■■□□□ 1.097e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.717e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-209ENST00000485376 2973 ntTSL 1 (best)17.99■□□□□ 0.477e-7■■■□□ 14.6
PRPF8Q6P2Q9 DDX11-220ENST00000542244 1193 ntTSL 1 (best)17.09■□□□□ 0.337e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-210ENST00000488357 1967 ntTSL 215.63■□□□□ 0.097e-7■■■□□ 14.6
PRPF8Q6P2Q9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.81□□□□□ -0.047e-7■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.99□□□□□ -0.177e-7■■■□□ 14.6
PRPF8Q6P2Q9 LAMA5-210ENST00000491036 728 ntTSL 213.84□□□□□ -0.192e-12■■■□□ 14.6
PRPF8Q6P2Q9 AKR1E2-207ENST00000474119 1626 ntTSL 212.68□□□□□ -0.387e-7■■■□□ 14.6
PRPF8Q6P2Q9 CAPRIN1-204ENST00000526494 399 ntTSL 412.63□□□□□ -0.396e-10■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-210ENST00000598500 887 ntTSL 212.6□□□□□ -0.397e-7■■■□□ 14.6
PRPF8Q6P2Q9 SZT2-214ENST00000638769 307 ntTSL 312.55□□□□□ -0.47e-7■■■□□ 14.6
PRPF8Q6P2Q9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.84□□□□□ -0.517e-7■■■□□ 14.6
PRPF8Q6P2Q9 ADGRE2-211ENST00000599423 584 ntTSL 411.83□□□□□ -0.517e-7■■■□□ 14.6
PRPF8Q6P2Q9 TRIP10-209ENST00000598843 469 ntTSL 211.55□□□□□ -0.563e-7■■■□□ 14.6
PRPF8Q6P2Q9 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC11.33□□□□□ -0.61e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.09□□□□□ -0.637e-7■■■□□ 14.6
Retrieved 100 of 73,762 protein–RNA pairs in 1587 ms