RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
COPS7B-205ENST00000409295 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
COPS7B-205ENST00000409295 ABCC9O60706 1549 aa30.15■■■□□ 2.42
COPS7B-205ENST00000409295 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
COPS7B-205ENST00000409295 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
COPS7B-205ENST00000409295 NACADO15069 1562 aa28.92■■■□□ 2.22
COPS7B-205ENST00000409295 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
COPS7B-205ENST00000409295 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
COPS7B-205ENST00000409295 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
COPS7B-205ENST00000409295 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
COPS7B-205ENST00000409295 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
COPS7B-205ENST00000409295 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
COPS7B-205ENST00000409295 BICRAQ9NZM4 1560 aa27.98■■■□□ 2.07
COPS7B-205ENST00000409295 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.04
COPS7B-205ENST00000409295 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
COPS7B-205ENST00000409295 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
COPS7B-205ENST00000409295 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
COPS7B-205ENST00000409295 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
COPS7B-205ENST00000409295 BAZ1AQ9NRL2 1556 aaPredicted RBP26.8■■□□□ 1.88
COPS7B-205ENST00000409295 SMARCA4P51532 1647 aa26.77■■□□□ 1.88
COPS7B-205ENST00000409295 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
COPS7B-205ENST00000409295 ATAD2BQ9ULI0 1458 aa26.71■■□□□ 1.87
COPS7B-205ENST00000409295 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
COPS7B-205ENST00000409295 MROH2BQ7Z745 1585 aa26.62■■□□□ 1.85
COPS7B-205ENST00000409295 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
COPS7B-205ENST00000409295 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
COPS7B-205ENST00000409295 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
COPS7B-205ENST00000409295 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
COPS7B-205ENST00000409295 WIZO95785 1651 aa26.29■■□□□ 1.8
COPS7B-205ENST00000409295 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
COPS7B-205ENST00000409295 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
COPS7B-205ENST00000409295 NESP48681 1621 aa26.03■■□□□ 1.76
COPS7B-205ENST00000409295 CADPSQ9ULU8 1353 aa25.99■■□□□ 1.75
COPS7B-205ENST00000409295 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
COPS7B-205ENST00000409295 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
COPS7B-205ENST00000409295 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
COPS7B-205ENST00000409295 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
COPS7B-205ENST00000409295 CFTRP13569 1480 aa25.76■■□□□ 1.71
COPS7B-205ENST00000409295 CUX2O14529 1486 aa25.72■■□□□ 1.71
COPS7B-205ENST00000409295 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
COPS7B-205ENST00000409295 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
COPS7B-205ENST00000409295 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
COPS7B-205ENST00000409295 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
COPS7B-205ENST00000409295 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
COPS7B-205ENST00000409295 WDR62O43379 1518 aa25.41■■□□□ 1.66
COPS7B-205ENST00000409295 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
COPS7B-205ENST00000409295 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
COPS7B-205ENST00000409295 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
COPS7B-205ENST00000409295 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
COPS7B-205ENST00000409295 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.61
COPS7B-205ENST00000409295 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
COPS7B-205ENST00000409295 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
COPS7B-205ENST00000409295 SOGA1O94964 1423 aa24.98■■□□□ 1.59
COPS7B-205ENST00000409295 CUX1P39880 1505 aa24.97■■□□□ 1.59
COPS7B-205ENST00000409295 POLA1P09884 1462 aaPredicted RBP24.97■■□□□ 1.59
COPS7B-205ENST00000409295 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
COPS7B-205ENST00000409295 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
COPS7B-205ENST00000409295 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
COPS7B-205ENST00000409295 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
COPS7B-205ENST00000409295 TARBP1Q13395 1621 aaKnown RBP24.85■■□□□ 1.57
COPS7B-205ENST00000409295 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.572e-6■■■■■ 29.8
COPS7B-205ENST00000409295 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
COPS7B-205ENST00000409295 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
COPS7B-205ENST00000409295 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
COPS7B-205ENST00000409295 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
COPS7B-205ENST00000409295 FBLN2P98095 1184 aa24.71■■□□□ 1.55
COPS7B-205ENST00000409295 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
COPS7B-205ENST00000409295 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
COPS7B-205ENST00000409295 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
COPS7B-205ENST00000409295 ABCA10Q8WWZ4 1543 aa24.68■■□□□ 1.54
COPS7B-205ENST00000409295 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
COPS7B-205ENST00000409295 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
COPS7B-205ENST00000409295 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
COPS7B-205ENST00000409295 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
COPS7B-205ENST00000409295 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
COPS7B-205ENST00000409295 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
COPS7B-205ENST00000409295 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
COPS7B-205ENST00000409295 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
COPS7B-205ENST00000409295 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
COPS7B-205ENST00000409295 CHD1O14646 1710 aa24.42■■□□□ 1.5
COPS7B-205ENST00000409295 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
COPS7B-205ENST00000409295 ERICH3Q5RHP9 1530 aa24.39■■□□□ 1.49
COPS7B-205ENST00000409295 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
COPS7B-205ENST00000409295 IGF1RP08069 1367 aa24.31■■□□□ 1.48
COPS7B-205ENST00000409295 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
COPS7B-205ENST00000409295 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
COPS7B-205ENST00000409295 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
COPS7B-205ENST00000409295 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
COPS7B-205ENST00000409295 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
COPS7B-205ENST00000409295 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
COPS7B-205ENST00000409295 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
COPS7B-205ENST00000409295 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
COPS7B-205ENST00000409295 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
COPS7B-205ENST00000409295 NUP160Q12769 1436 aa24.18■■□□□ 1.46
COPS7B-205ENST00000409295 CUL7Q14999 1698 aa24.11■■□□□ 1.45
COPS7B-205ENST00000409295 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
COPS7B-205ENST00000409295 JPH4Q96JJ6 628 aa24.09■■□□□ 1.45
COPS7B-205ENST00000409295 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
COPS7B-205ENST00000409295 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
COPS7B-205ENST00000409295 ARAP1Q96P48 1450 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms