RNA–Protein interactions for RNA: ENST00000497267.5

ARHGEF3-214, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 2,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-214ENST00000497267 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
ARHGEF3-214ENST00000497267 ABCC9O60706 1549 aa16.47■□□□□ 0.23
ARHGEF3-214ENST00000497267 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
ARHGEF3-214ENST00000497267 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
ARHGEF3-214ENST00000497267 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
ARHGEF3-214ENST00000497267 NACADO15069 1562 aa15.48■□□□□ 0.07
ARHGEF3-214ENST00000497267 DCAF8L2P0C7V8 631 aa15.35■□□□□ 0.05
ARHGEF3-214ENST00000497267 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.05
ARHGEF3-214ENST00000497267 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
ARHGEF3-214ENST00000497267 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
ARHGEF3-214ENST00000497267 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
ARHGEF3-214ENST00000497267 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
ARHGEF3-214ENST00000497267 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
ARHGEF3-214ENST00000497267 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
ARHGEF3-214ENST00000497267 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
ARHGEF3-214ENST00000497267 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
ARHGEF3-214ENST00000497267 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.04
ARHGEF3-214ENST00000497267 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
ARHGEF3-214ENST00000497267 NCAPD3P42695 1498 aa14.33□□□□□ -0.12
ARHGEF3-214ENST00000497267 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
ARHGEF3-214ENST00000497267 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
ARHGEF3-214ENST00000497267 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
ARHGEF3-214ENST00000497267 HMGXB3Q12766 1538 aa14.21□□□□□ -0.13
ARHGEF3-214ENST00000497267 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
ARHGEF3-214ENST00000497267 NESP48681 1621 aa14.18□□□□□ -0.14
ARHGEF3-214ENST00000497267 CUX2O14529 1486 aa14.17□□□□□ -0.14
ARHGEF3-214ENST00000497267 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
ARHGEF3-214ENST00000497267 BAZ1AQ9NRL2 1556 aaPredicted RBP14.14□□□□□ -0.15
ARHGEF3-214ENST00000497267 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
ARHGEF3-214ENST00000497267 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
ARHGEF3-214ENST00000497267 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
ARHGEF3-214ENST00000497267 THOC2Q8NI27 1593 aaKnown RBP14.03□□□□□ -0.16
ARHGEF3-214ENST00000497267 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
ARHGEF3-214ENST00000497267 KIF21AQ7Z4S6 1674 aa13.97□□□□□ -0.17
ARHGEF3-214ENST00000497267 WIZO95785 1651 aa13.92□□□□□ -0.18
ARHGEF3-214ENST00000497267 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
ARHGEF3-214ENST00000497267 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
ARHGEF3-214ENST00000497267 MRC2Q9UBG0 1479 aa13.8□□□□□ -0.2
ARHGEF3-214ENST00000497267 WDR62O43379 1518 aa13.8□□□□□ -0.2
ARHGEF3-214ENST00000497267 RSF1Q96T23 1441 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF3-214ENST00000497267 CFTRP13569 1480 aa13.72□□□□□ -0.21
ARHGEF3-214ENST00000497267 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
ARHGEF3-214ENST00000497267 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
ARHGEF3-214ENST00000497267 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
ARHGEF3-214ENST00000497267 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
ARHGEF3-214ENST00000497267 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
ARHGEF3-214ENST00000497267 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
ARHGEF3-214ENST00000497267 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
ARHGEF3-214ENST00000497267 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF3-214ENST00000497267 OSCARQ8IYS5 282 aa13.48□□□□□ -0.25
ARHGEF3-214ENST00000497267 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
ARHGEF3-214ENST00000497267 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
ARHGEF3-214ENST00000497267 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
ARHGEF3-214ENST00000497267 DNMBPQ6XZF7 1577 aa13.4□□□□□ -0.26
ARHGEF3-214ENST00000497267 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
ARHGEF3-214ENST00000497267 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
ARHGEF3-214ENST00000497267 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
ARHGEF3-214ENST00000497267 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
ARHGEF3-214ENST00000497267 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.27
ARHGEF3-214ENST00000497267 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
ARHGEF3-214ENST00000497267 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
ARHGEF3-214ENST00000497267 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF3-214ENST00000497267 CHD1O14646 1710 aa13.31□□□□□ -0.28
ARHGEF3-214ENST00000497267 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
ARHGEF3-214ENST00000497267 CUX1P39880 1505 aa13.25□□□□□ -0.29
ARHGEF3-214ENST00000497267 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
ARHGEF3-214ENST00000497267 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
ARHGEF3-214ENST00000497267 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
ARHGEF3-214ENST00000497267 SOGA1O94964 1423 aa13.23□□□□□ -0.29
ARHGEF3-214ENST00000497267 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.3
ARHGEF3-214ENST00000497267 CYB5RLQ6IPT4 315 aa13.2□□□□□ -0.3
ARHGEF3-214ENST00000497267 FBLN2P98095 1184 aa13.19□□□□□ -0.3
ARHGEF3-214ENST00000497267 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
ARHGEF3-214ENST00000497267 CLASP1Q7Z460 1538 aa13.17□□□□□ -0.3
ARHGEF3-214ENST00000497267 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF3-214ENST00000497267 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
ARHGEF3-214ENST00000497267 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
ARHGEF3-214ENST00000497267 SYNJ2O15056 1496 aa13.09□□□□□ -0.31
ARHGEF3-214ENST00000497267 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
ARHGEF3-214ENST00000497267 SYNJ1O43426 1573 aa13.09□□□□□ -0.31
ARHGEF3-214ENST00000497267 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
ARHGEF3-214ENST00000497267 GAPVD1Q14C86 1478 aa13.08□□□□□ -0.32
ARHGEF3-214ENST00000497267 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF3-214ENST00000497267 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
ARHGEF3-214ENST00000497267 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF3-214ENST00000497267 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
ARHGEF3-214ENST00000497267 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
ARHGEF3-214ENST00000497267 ADAMTS12P58397 1594 aa12.99□□□□□ -0.33
ARHGEF3-214ENST00000497267 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
ARHGEF3-214ENST00000497267 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
ARHGEF3-214ENST00000497267 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
ARHGEF3-214ENST00000497267 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
ARHGEF3-214ENST00000497267 NUP160Q12769 1436 aa12.96□□□□□ -0.34
ARHGEF3-214ENST00000497267 SHROOM2Q13796 1616 aa12.92□□□□□ -0.34
ARHGEF3-214ENST00000497267 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
ARHGEF3-214ENST00000497267 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
ARHGEF3-214ENST00000497267 RUSC2Q8N2Y8 1516 aa12.81□□□□□ -0.36
ARHGEF3-214ENST00000497267 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF3-214ENST00000497267 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.36
ARHGEF3-214ENST00000497267 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms