RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 NISCHQ9Y2I1 1504 aa30.67■■■□□ 2.5
COPS7B-223ENST00000611614 CCDC180Q9P1Z9 1646 aa26.74■■□□□ 1.87
COPS7B-223ENST00000611614 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
COPS7B-223ENST00000611614 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
COPS7B-223ENST00000611614 ABCC9O60706 1549 aa25.42■■□□□ 1.66
COPS7B-223ENST00000611614 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
COPS7B-223ENST00000611614 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
COPS7B-223ENST00000611614 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
COPS7B-223ENST00000611614 NACADO15069 1562 aa24.98■■□□□ 1.59
COPS7B-223ENST00000611614 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
COPS7B-223ENST00000611614 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
COPS7B-223ENST00000611614 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
COPS7B-223ENST00000611614 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.45
COPS7B-223ENST00000611614 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
COPS7B-223ENST00000611614 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
COPS7B-223ENST00000611614 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
COPS7B-223ENST00000611614 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
COPS7B-223ENST00000611614 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
COPS7B-223ENST00000611614 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
COPS7B-223ENST00000611614 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
COPS7B-223ENST00000611614 WIZO95785 1651 aa23.47■■□□□ 1.35
COPS7B-223ENST00000611614 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
COPS7B-223ENST00000611614 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
COPS7B-223ENST00000611614 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
COPS7B-223ENST00000611614 TOP2AP11388 1531 aaKnown RBP23.25■■□□□ 1.31
COPS7B-223ENST00000611614 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
COPS7B-223ENST00000611614 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
COPS7B-223ENST00000611614 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.3
COPS7B-223ENST00000611614 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
COPS7B-223ENST00000611614 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
COPS7B-223ENST00000611614 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
COPS7B-223ENST00000611614 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.27
COPS7B-223ENST00000611614 TRIM41Q8WV44 630 aa22.73■■□□□ 1.23
COPS7B-223ENST00000611614 CFTRP13569 1480 aa22.52■■□□□ 1.2
COPS7B-223ENST00000611614 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
COPS7B-223ENST00000611614 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
COPS7B-223ENST00000611614 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
COPS7B-223ENST00000611614 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
COPS7B-223ENST00000611614 HRCP23327 699 aa22.43■■□□□ 1.18
COPS7B-223ENST00000611614 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
COPS7B-223ENST00000611614 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
COPS7B-223ENST00000611614 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
COPS7B-223ENST00000611614 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
COPS7B-223ENST00000611614 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
COPS7B-223ENST00000611614 NESP48681 1621 aa22.25■■□□□ 1.15
COPS7B-223ENST00000611614 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
COPS7B-223ENST00000611614 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
COPS7B-223ENST00000611614 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
COPS7B-223ENST00000611614 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
COPS7B-223ENST00000611614 CUX1P39880 1505 aa22.14■■□□□ 1.14
COPS7B-223ENST00000611614 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.14
COPS7B-223ENST00000611614 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
COPS7B-223ENST00000611614 EEA1Q15075 1411 aa22.11■■□□□ 1.13
COPS7B-223ENST00000611614 SOGA1O94964 1423 aa22.1■■□□□ 1.13
COPS7B-223ENST00000611614 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
COPS7B-223ENST00000611614 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
COPS7B-223ENST00000611614 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
COPS7B-223ENST00000611614 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
COPS7B-223ENST00000611614 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
COPS7B-223ENST00000611614 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
COPS7B-223ENST00000611614 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
COPS7B-223ENST00000611614 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
COPS7B-223ENST00000611614 KIF27Q86VH2 1401 aa21.91■■□□□ 1.1
COPS7B-223ENST00000611614 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
COPS7B-223ENST00000611614 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
COPS7B-223ENST00000611614 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
COPS7B-223ENST00000611614 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
COPS7B-223ENST00000611614 CUX2O14529 1486 aa21.84■■□□□ 1.09
COPS7B-223ENST00000611614 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
COPS7B-223ENST00000611614 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
COPS7B-223ENST00000611614 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
COPS7B-223ENST00000611614 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
COPS7B-223ENST00000611614 KIF21BO75037 1637 aa21.74■■□□□ 1.07
COPS7B-223ENST00000611614 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.06
COPS7B-223ENST00000611614 WDR62O43379 1518 aa21.69■■□□□ 1.06
COPS7B-223ENST00000611614 IGF1RP08069 1367 aa21.67■■□□□ 1.06
COPS7B-223ENST00000611614 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
COPS7B-223ENST00000611614 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
COPS7B-223ENST00000611614 RAPGEF2Q9Y4G8 1499 aa21.66■■□□□ 1.06
COPS7B-223ENST00000611614 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
COPS7B-223ENST00000611614 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
COPS7B-223ENST00000611614 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
COPS7B-223ENST00000611614 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
COPS7B-223ENST00000611614 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
COPS7B-223ENST00000611614 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
COPS7B-223ENST00000611614 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
COPS7B-223ENST00000611614 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
COPS7B-223ENST00000611614 CEP162Q5TB80 1403 aa21.58■■□□□ 1.04
COPS7B-223ENST00000611614 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
COPS7B-223ENST00000611614 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
COPS7B-223ENST00000611614 CUL7Q14999 1698 aa21.48■■□□□ 1.03
COPS7B-223ENST00000611614 AQRO60306 1485 aaKnown RBP eCLIP21.47■■□□□ 1.032e-6■■■■■ 29.8
COPS7B-223ENST00000611614 CLIP1P30622 1438 aa21.45■■□□□ 1.02
COPS7B-223ENST00000611614 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
COPS7B-223ENST00000611614 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
COPS7B-223ENST00000611614 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
COPS7B-223ENST00000611614 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
COPS7B-223ENST00000611614 FHAD1B1AJZ9 1412 aa21.35■■□□□ 1.01
COPS7B-223ENST00000611614 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
COPS7B-223ENST00000611614 ADAMTS12P58397 1594 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms