RNA–Protein interactions for RNA: ENST00000496106.5

ARHGEF3-213, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-213ENST00000496106 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.37
ARHGEF3-213ENST00000496106 CCDC180Q9P1Z9 1646 aa26.04■■□□□ 1.76
ARHGEF3-213ENST00000496106 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
ARHGEF3-213ENST00000496106 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
ARHGEF3-213ENST00000496106 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
ARHGEF3-213ENST00000496106 ABCC9O60706 1549 aa24.51■■□□□ 1.51
ARHGEF3-213ENST00000496106 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
ARHGEF3-213ENST00000496106 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
ARHGEF3-213ENST00000496106 NACADO15069 1562 aa24.21■■□□□ 1.47
ARHGEF3-213ENST00000496106 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
ARHGEF3-213ENST00000496106 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
ARHGEF3-213ENST00000496106 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
ARHGEF3-213ENST00000496106 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
ARHGEF3-213ENST00000496106 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
ARHGEF3-213ENST00000496106 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
ARHGEF3-213ENST00000496106 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
ARHGEF3-213ENST00000496106 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
ARHGEF3-213ENST00000496106 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
ARHGEF3-213ENST00000496106 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
ARHGEF3-213ENST00000496106 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
ARHGEF3-213ENST00000496106 WIZO95785 1651 aa22.94■■□□□ 1.26
ARHGEF3-213ENST00000496106 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
ARHGEF3-213ENST00000496106 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
ARHGEF3-213ENST00000496106 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
ARHGEF3-213ENST00000496106 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
ARHGEF3-213ENST00000496106 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
ARHGEF3-213ENST00000496106 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
ARHGEF3-213ENST00000496106 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
ARHGEF3-213ENST00000496106 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.18
ARHGEF3-213ENST00000496106 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
ARHGEF3-213ENST00000496106 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
ARHGEF3-213ENST00000496106 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
ARHGEF3-213ENST00000496106 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
ARHGEF3-213ENST00000496106 ABCC8Q09428 1581 aa22■■□□□ 1.11
ARHGEF3-213ENST00000496106 CFTRP13569 1480 aa21.88■■□□□ 1.09
ARHGEF3-213ENST00000496106 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
ARHGEF3-213ENST00000496106 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
ARHGEF3-213ENST00000496106 SYNJ1O43426 1573 aa21.77■■□□□ 1.08
ARHGEF3-213ENST00000496106 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.07
ARHGEF3-213ENST00000496106 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
ARHGEF3-213ENST00000496106 DNAJC5BQ9UF47 199 aa21.69■■□□□ 1.06
ARHGEF3-213ENST00000496106 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
ARHGEF3-213ENST00000496106 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
ARHGEF3-213ENST00000496106 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
ARHGEF3-213ENST00000496106 CUX1P39880 1505 aa21.59■■□□□ 1.05
ARHGEF3-213ENST00000496106 SOGA1O94964 1423 aa21.59■■□□□ 1.05
ARHGEF3-213ENST00000496106 NESP48681 1621 aa21.59■■□□□ 1.05
ARHGEF3-213ENST00000496106 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
ARHGEF3-213ENST00000496106 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
ARHGEF3-213ENST00000496106 FANCD2Q9BXW9 1451 aa21.52■■□□□ 1.04
ARHGEF3-213ENST00000496106 EEA1Q15075 1411 aa21.51■■□□□ 1.03
ARHGEF3-213ENST00000496106 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
ARHGEF3-213ENST00000496106 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
ARHGEF3-213ENST00000496106 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
ARHGEF3-213ENST00000496106 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
ARHGEF3-213ENST00000496106 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
ARHGEF3-213ENST00000496106 EHMT2Q96KQ7 1210 aa21.32■■□□□ 1
ARHGEF3-213ENST00000496106 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
ARHGEF3-213ENST00000496106 TOPBP1Q92547 1522 aa21.31■■□□□ 1
ARHGEF3-213ENST00000496106 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
ARHGEF3-213ENST00000496106 KIF21BO75037 1637 aa21.28■■□□□ 1
ARHGEF3-213ENST00000496106 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
ARHGEF3-213ENST00000496106 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
ARHGEF3-213ENST00000496106 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
ARHGEF3-213ENST00000496106 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
ARHGEF3-213ENST00000496106 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
ARHGEF3-213ENST00000496106 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF3-213ENST00000496106 CUX2O14529 1486 aa21.17■□□□□ 0.98
ARHGEF3-213ENST00000496106 PRXQ9BXM0 1461 aa21.16■□□□□ 0.98
ARHGEF3-213ENST00000496106 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
ARHGEF3-213ENST00000496106 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
ARHGEF3-213ENST00000496106 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.97
ARHGEF3-213ENST00000496106 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
ARHGEF3-213ENST00000496106 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
ARHGEF3-213ENST00000496106 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
ARHGEF3-213ENST00000496106 HRCP23327 699 aa21.1■□□□□ 0.97
ARHGEF3-213ENST00000496106 IGF1RP08069 1367 aa21.09■□□□□ 0.97
ARHGEF3-213ENST00000496106 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
ARHGEF3-213ENST00000496106 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.96
ARHGEF3-213ENST00000496106 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
ARHGEF3-213ENST00000496106 WDR62O43379 1518 aa21.02■□□□□ 0.96
ARHGEF3-213ENST00000496106 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
ARHGEF3-213ENST00000496106 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
ARHGEF3-213ENST00000496106 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
ARHGEF3-213ENST00000496106 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
ARHGEF3-213ENST00000496106 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
ARHGEF3-213ENST00000496106 CUL7Q14999 1698 aa20.9■□□□□ 0.94
ARHGEF3-213ENST00000496106 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
ARHGEF3-213ENST00000496106 CLIP1P30622 1438 aa20.88■□□□□ 0.93
ARHGEF3-213ENST00000496106 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
ARHGEF3-213ENST00000496106 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
ARHGEF3-213ENST00000496106 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.92
ARHGEF3-213ENST00000496106 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF3-213ENST00000496106 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
ARHGEF3-213ENST00000496106 VPS8Q8N3P4 1428 aa20.72■□□□□ 0.91
ARHGEF3-213ENST00000496106 CTTNBP2Q8WZ74 1663 aa20.72■□□□□ 0.91
ARHGEF3-213ENST00000496106 RANGAP1P46060 587 aaPredicted RBP20.71■□□□□ 0.91
ARHGEF3-213ENST00000496106 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
ARHGEF3-213ENST00000496106 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
ARHGEF3-213ENST00000496106 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms