RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 NISCHQ9Y2I1 1504 aa26.52■■□□□ 1.84
ARHGEF3-204ENST00000465659 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
ARHGEF3-204ENST00000465659 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
ARHGEF3-204ENST00000465659 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
ARHGEF3-204ENST00000465659 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
ARHGEF3-204ENST00000465659 DCAF1Q9Y4B6 1507 aa21.89■■□□□ 1.1
ARHGEF3-204ENST00000465659 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
ARHGEF3-204ENST00000465659 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
ARHGEF3-204ENST00000465659 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
ARHGEF3-204ENST00000465659 ABCC9O60706 1549 aa21.22■□□□□ 0.99
ARHGEF3-204ENST00000465659 HRCP23327 699 aa21.01■□□□□ 0.95
ARHGEF3-204ENST00000465659 SCRIBQ14160 1630 aa21.01■□□□□ 0.95
ARHGEF3-204ENST00000465659 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF3-204ENST00000465659 NACADO15069 1562 aa20.86■□□□□ 0.93
ARHGEF3-204ENST00000465659 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
ARHGEF3-204ENST00000465659 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
ARHGEF3-204ENST00000465659 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
ARHGEF3-204ENST00000465659 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
ARHGEF3-204ENST00000465659 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
ARHGEF3-204ENST00000465659 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
ARHGEF3-204ENST00000465659 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF3-204ENST00000465659 WIZO95785 1651 aa20.45■□□□□ 0.86
ARHGEF3-204ENST00000465659 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF3-204ENST00000465659 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
ARHGEF3-204ENST00000465659 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
ARHGEF3-204ENST00000465659 FAM9AQ8IZU1 332 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF3-204ENST00000465659 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF3-204ENST00000465659 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
ARHGEF3-204ENST00000465659 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
ARHGEF3-204ENST00000465659 UNC13AQ9UPW8 1703 aa20.17■□□□□ 0.82
ARHGEF3-204ENST00000465659 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
ARHGEF3-204ENST00000465659 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
ARHGEF3-204ENST00000465659 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
ARHGEF3-204ENST00000465659 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
ARHGEF3-204ENST00000465659 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.78
ARHGEF3-204ENST00000465659 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.77
ARHGEF3-204ENST00000465659 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
ARHGEF3-204ENST00000465659 EEA1Q15075 1411 aa19.87■□□□□ 0.77
ARHGEF3-204ENST00000465659 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
ARHGEF3-204ENST00000465659 SOGA1O94964 1423 aa19.79■□□□□ 0.76
ARHGEF3-204ENST00000465659 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
ARHGEF3-204ENST00000465659 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
ARHGEF3-204ENST00000465659 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
ARHGEF3-204ENST00000465659 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
ARHGEF3-204ENST00000465659 GOLGA3Q08378 1498 aa19.66■□□□□ 0.74
ARHGEF3-204ENST00000465659 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
ARHGEF3-204ENST00000465659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
ARHGEF3-204ENST00000465659 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
ARHGEF3-204ENST00000465659 KIF21BO75037 1637 aa19.59■□□□□ 0.73
ARHGEF3-204ENST00000465659 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
ARHGEF3-204ENST00000465659 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
ARHGEF3-204ENST00000465659 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
ARHGEF3-204ENST00000465659 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
ARHGEF3-204ENST00000465659 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
ARHGEF3-204ENST00000465659 CLIP1P30622 1438 aa19.4■□□□□ 0.7
ARHGEF3-204ENST00000465659 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
ARHGEF3-204ENST00000465659 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF3-204ENST00000465659 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
ARHGEF3-204ENST00000465659 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
ARHGEF3-204ENST00000465659 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.68
ARHGEF3-204ENST00000465659 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
ARHGEF3-204ENST00000465659 NCAPD3P42695 1498 aa19.27■□□□□ 0.68
ARHGEF3-204ENST00000465659 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
ARHGEF3-204ENST00000465659 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
ARHGEF3-204ENST00000465659 PRXQ9BXM0 1461 aa19.22■□□□□ 0.67
ARHGEF3-204ENST00000465659 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
ARHGEF3-204ENST00000465659 ZNF316A6NFI3 1004 aaPredicted RBP19.16■□□□□ 0.66
ARHGEF3-204ENST00000465659 APLP2Q06481 763 aa19.16■□□□□ 0.66
ARHGEF3-204ENST00000465659 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
ARHGEF3-204ENST00000465659 CUX1P39880 1505 aa19.16■□□□□ 0.66
ARHGEF3-204ENST00000465659 CFTRP13569 1480 aa19.12■□□□□ 0.65
ARHGEF3-204ENST00000465659 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
ARHGEF3-204ENST00000465659 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
ARHGEF3-204ENST00000465659 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
ARHGEF3-204ENST00000465659 KIF27Q86VH2 1401 aa19.08■□□□□ 0.65
ARHGEF3-204ENST00000465659 CENPBP07199 599 aaPredicted RBP19.08■□□□□ 0.64
ARHGEF3-204ENST00000465659 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
ARHGEF3-204ENST00000465659 CLSPNQ9HAW4 1339 aa19.01■□□□□ 0.63
ARHGEF3-204ENST00000465659 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
ARHGEF3-204ENST00000465659 RRBP1Q9P2E9 1410 aaKnown RBP18.95■□□□□ 0.62
ARHGEF3-204ENST00000465659 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
ARHGEF3-204ENST00000465659 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
ARHGEF3-204ENST00000465659 CUX2O14529 1486 aa18.9■□□□□ 0.62
ARHGEF3-204ENST00000465659 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
ARHGEF3-204ENST00000465659 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.62
ARHGEF3-204ENST00000465659 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
ARHGEF3-204ENST00000465659 IGF1RP08069 1367 aa18.85■□□□□ 0.61
ARHGEF3-204ENST00000465659 MAP3K1Q13233 1512 aa18.85■□□□□ 0.61
ARHGEF3-204ENST00000465659 MIER1Q8N108 512 aa18.83■□□□□ 0.6
ARHGEF3-204ENST00000465659 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
ARHGEF3-204ENST00000465659 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
ARHGEF3-204ENST00000465659 TIAM1Q13009 1591 aa18.77■□□□□ 0.59
ARHGEF3-204ENST00000465659 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
ARHGEF3-204ENST00000465659 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
ARHGEF3-204ENST00000465659 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
ARHGEF3-204ENST00000465659 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
ARHGEF3-204ENST00000465659 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
ARHGEF3-204ENST00000465659 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
ARHGEF3-204ENST00000465659 FANCD2Q9BXW9 1451 aa18.66■□□□□ 0.58
ARHGEF3-204ENST00000465659 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms