RNA–Protein interactions for RNA: ENST00000473779.5

ARHGEF3-207, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-207ENST00000473779 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
ARHGEF3-207ENST00000473779 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
ARHGEF3-207ENST00000473779 ABCC9O60706 1549 aa22.99■■□□□ 1.27
ARHGEF3-207ENST00000473779 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
ARHGEF3-207ENST00000473779 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
ARHGEF3-207ENST00000473779 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
ARHGEF3-207ENST00000473779 NACADO15069 1562 aa22.43■■□□□ 1.18
ARHGEF3-207ENST00000473779 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
ARHGEF3-207ENST00000473779 RB1CC1Q8TDY2 1594 aa22.36■■□□□ 1.17
ARHGEF3-207ENST00000473779 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
ARHGEF3-207ENST00000473779 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
ARHGEF3-207ENST00000473779 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
ARHGEF3-207ENST00000473779 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
ARHGEF3-207ENST00000473779 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
ARHGEF3-207ENST00000473779 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
ARHGEF3-207ENST00000473779 BAZ1AQ9NRL2 1556 aaPredicted RBP21■□□□□ 0.95
ARHGEF3-207ENST00000473779 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
ARHGEF3-207ENST00000473779 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
ARHGEF3-207ENST00000473779 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
ARHGEF3-207ENST00000473779 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
ARHGEF3-207ENST00000473779 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
ARHGEF3-207ENST00000473779 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
ARHGEF3-207ENST00000473779 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ARHGEF3-207ENST00000473779 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
ARHGEF3-207ENST00000473779 DNAJC5BQ9UF47 199 aa20.69■□□□□ 0.9
ARHGEF3-207ENST00000473779 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
ARHGEF3-207ENST00000473779 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
ARHGEF3-207ENST00000473779 WIZO95785 1651 aa20.63■□□□□ 0.89
ARHGEF3-207ENST00000473779 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
ARHGEF3-207ENST00000473779 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
ARHGEF3-207ENST00000473779 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
ARHGEF3-207ENST00000473779 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ARHGEF3-207ENST00000473779 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.81
ARHGEF3-207ENST00000473779 LAMC3Q9Y6N6 1575 aa20.08■□□□□ 0.81
ARHGEF3-207ENST00000473779 CFTRP13569 1480 aa20.05■□□□□ 0.8
ARHGEF3-207ENST00000473779 NESP48681 1621 aa19.98■□□□□ 0.79
ARHGEF3-207ENST00000473779 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
ARHGEF3-207ENST00000473779 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
ARHGEF3-207ENST00000473779 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
ARHGEF3-207ENST00000473779 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
ARHGEF3-207ENST00000473779 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
ARHGEF3-207ENST00000473779 KIF21AQ7Z4S6 1674 aa19.8■□□□□ 0.76
ARHGEF3-207ENST00000473779 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
ARHGEF3-207ENST00000473779 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
ARHGEF3-207ENST00000473779 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
ARHGEF3-207ENST00000473779 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
ARHGEF3-207ENST00000473779 WDR62O43379 1518 aa19.63■□□□□ 0.73
ARHGEF3-207ENST00000473779 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ARHGEF3-207ENST00000473779 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
ARHGEF3-207ENST00000473779 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
ARHGEF3-207ENST00000473779 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
ARHGEF3-207ENST00000473779 CUX1P39880 1505 aa19.54■□□□□ 0.72
ARHGEF3-207ENST00000473779 CUX2O14529 1486 aa19.53■□□□□ 0.72
ARHGEF3-207ENST00000473779 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
ARHGEF3-207ENST00000473779 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
ARHGEF3-207ENST00000473779 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
ARHGEF3-207ENST00000473779 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF3-207ENST00000473779 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
ARHGEF3-207ENST00000473779 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
ARHGEF3-207ENST00000473779 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
ARHGEF3-207ENST00000473779 SOGA1O94964 1423 aa19.34■□□□□ 0.69
ARHGEF3-207ENST00000473779 TARBP1Q13395 1621 aaKnown RBP19.32■□□□□ 0.68
ARHGEF3-207ENST00000473779 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
ARHGEF3-207ENST00000473779 ABCA10Q8WWZ4 1543 aa19.29■□□□□ 0.68
ARHGEF3-207ENST00000473779 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
ARHGEF3-207ENST00000473779 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF3-207ENST00000473779 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
ARHGEF3-207ENST00000473779 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
ARHGEF3-207ENST00000473779 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
ARHGEF3-207ENST00000473779 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
ARHGEF3-207ENST00000473779 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
ARHGEF3-207ENST00000473779 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.65
ARHGEF3-207ENST00000473779 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
ARHGEF3-207ENST00000473779 EEA1Q15075 1411 aa19.08■□□□□ 0.65
ARHGEF3-207ENST00000473779 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
ARHGEF3-207ENST00000473779 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
ARHGEF3-207ENST00000473779 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF3-207ENST00000473779 SNAPC4Q5SXM2 1469 aa19■□□□□ 0.63
ARHGEF3-207ENST00000473779 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
ARHGEF3-207ENST00000473779 IGF1RP08069 1367 aa18.99■□□□□ 0.63
ARHGEF3-207ENST00000473779 CUL7Q14999 1698 aa18.98■□□□□ 0.63
ARHGEF3-207ENST00000473779 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
ARHGEF3-207ENST00000473779 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
ARHGEF3-207ENST00000473779 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
ARHGEF3-207ENST00000473779 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
ARHGEF3-207ENST00000473779 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
ARHGEF3-207ENST00000473779 AEBP2Q6ZN18 517 aaPredicted RBP18.88■□□□□ 0.61
ARHGEF3-207ENST00000473779 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
ARHGEF3-207ENST00000473779 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF3-207ENST00000473779 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
ARHGEF3-207ENST00000473779 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
ARHGEF3-207ENST00000473779 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
ARHGEF3-207ENST00000473779 CHD1O14646 1710 aa18.85■□□□□ 0.61
ARHGEF3-207ENST00000473779 FBLN2P98095 1184 aa18.83■□□□□ 0.6
ARHGEF3-207ENST00000473779 KIF21BO75037 1637 aa18.82■□□□□ 0.6
ARHGEF3-207ENST00000473779 NUP160Q12769 1436 aa18.75■□□□□ 0.59
ARHGEF3-207ENST00000473779 GOLGA3Q08378 1498 aa18.74■□□□□ 0.59
ARHGEF3-207ENST00000473779 OSCARQ8IYS5 282 aa18.74■□□□□ 0.59
ARHGEF3-207ENST00000473779 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
ARHGEF3-207ENST00000473779 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms