RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
ARHGEF3-215ENST00000498517 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
ARHGEF3-215ENST00000498517 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF3-215ENST00000498517 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF3-215ENST00000498517 FOXD1Q16676 465 aa17.94■□□□□ 0.46
ARHGEF3-215ENST00000498517 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
ARHGEF3-215ENST00000498517 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
ARHGEF3-215ENST00000498517 ADRA2BP18089 450 aa16.74■□□□□ 0.27
ARHGEF3-215ENST00000498517 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF3-215ENST00000498517 MSH5O43196 834 aa16.64■□□□□ 0.25
ARHGEF3-215ENST00000498517 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
ARHGEF3-215ENST00000498517 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF3-215ENST00000498517 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.03
ARHGEF3-215ENST00000498517 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
ARHGEF3-215ENST00000498517 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
ARHGEF3-215ENST00000498517 HOXD11P31277 338 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF3-215ENST00000498517 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
ARHGEF3-215ENST00000498517 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
ARHGEF3-215ENST00000498517 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF3-215ENST00000498517 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF3-215ENST00000498517 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
ARHGEF3-215ENST00000498517 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
ARHGEF3-215ENST00000498517 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
ARHGEF3-215ENST00000498517 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
ARHGEF3-215ENST00000498517 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
ARHGEF3-215ENST00000498517 KCNA4P22459 653 aa13.97□□□□□ -0.17
ARHGEF3-215ENST00000498517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.194e-7■■□□□ 12.8
ARHGEF3-215ENST00000498517 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF3-215ENST00000498517 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
ARHGEF3-215ENST00000498517 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF3-215ENST00000498517 CAPN15O75808 1086 aa13.41□□□□□ -0.26
ARHGEF3-215ENST00000498517 DSG3P32926 999 aa13.4□□□□□ -0.26
ARHGEF3-215ENST00000498517 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF3-215ENST00000498517 ABCB7O75027 752 aa13.17□□□□□ -0.3
ARHGEF3-215ENST00000498517 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF3-215ENST00000498517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF3-215ENST00000498517 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
ARHGEF3-215ENST00000498517 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
ARHGEF3-215ENST00000498517 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF3-215ENST00000498517 APLP2Q06481 763 aa13.07□□□□□ -0.32
ARHGEF3-215ENST00000498517 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF3-215ENST00000498517 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
ARHGEF3-215ENST00000498517 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF3-215ENST00000498517 ZBTB22O15209 634 aa12.92□□□□□ -0.34
ARHGEF3-215ENST00000498517 POLA2Q14181 598 aa12.87□□□□□ -0.35
ARHGEF3-215ENST00000498517 POTEHQ6S545 545 aa12.8□□□□□ -0.36
ARHGEF3-215ENST00000498517 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
ARHGEF3-215ENST00000498517 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
ARHGEF3-215ENST00000498517 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
ARHGEF3-215ENST00000498517 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
ARHGEF3-215ENST00000498517 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF3-215ENST00000498517 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
ARHGEF3-215ENST00000498517 NISCHQ9Y2I1 1504 aa12.38□□□□□ -0.43
ARHGEF3-215ENST00000498517 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-215ENST00000498517 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF3-215ENST00000498517 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
ARHGEF3-215ENST00000498517 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
ARHGEF3-215ENST00000498517 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
ARHGEF3-215ENST00000498517 FBLN2P98095 1184 aa12.19□□□□□ -0.46
ARHGEF3-215ENST00000498517 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
ARHGEF3-215ENST00000498517 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
ARHGEF3-215ENST00000498517 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
ARHGEF3-215ENST00000498517 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
ARHGEF3-215ENST00000498517 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
ARHGEF3-215ENST00000498517 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
ARHGEF3-215ENST00000498517 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF3-215ENST00000498517 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF3-215ENST00000498517 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
ARHGEF3-215ENST00000498517 EVX2Q03828 476 aa11.94□□□□□ -0.5
ARHGEF3-215ENST00000498517 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
ARHGEF3-215ENST00000498517 HAX1O00165 279 aa11.91□□□□□ -0.5
ARHGEF3-215ENST00000498517 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
ARHGEF3-215ENST00000498517 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
ARHGEF3-215ENST00000498517 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
ARHGEF3-215ENST00000498517 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
ARHGEF3-215ENST00000498517 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
ARHGEF3-215ENST00000498517 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
ARHGEF3-215ENST00000498517 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF3-215ENST00000498517 GABBR2O75899 941 aa11.55□□□□□ -0.56
ARHGEF3-215ENST00000498517 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
ARHGEF3-215ENST00000498517 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
ARHGEF3-215ENST00000498517 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
ARHGEF3-215ENST00000498517 POTEIP0CG38 1075 aa11.4□□□□□ -0.58
ARHGEF3-215ENST00000498517 PROM2Q8N271 834 aa11.38□□□□□ -0.59
ARHGEF3-215ENST00000498517 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF3-215ENST00000498517 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
ARHGEF3-215ENST00000498517 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-215ENST00000498517 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF3-215ENST00000498517 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
ARHGEF3-215ENST00000498517 LHX8Q68G74 356 aa11.23□□□□□ -0.61
ARHGEF3-215ENST00000498517 CLCN6P51797 869 aa11.18□□□□□ -0.62
ARHGEF3-215ENST00000498517 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
ARHGEF3-215ENST00000498517 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
ARHGEF3-215ENST00000498517 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF3-215ENST00000498517 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
ARHGEF3-215ENST00000498517 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
ARHGEF3-215ENST00000498517 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF3-215ENST00000498517 FKBP8Q14318 412 aa11.05□□□□□ -0.64
ARHGEF3-215ENST00000498517 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
ARHGEF3-215ENST00000498517 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms