RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 NISCHQ9Y2I1 1504 aa32.28■■■□□ 2.76
COPS7B-206ENST00000410017 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
COPS7B-206ENST00000410017 HRCP23327 699 aa27.7■■■□□ 2.02
COPS7B-206ENST00000410017 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.01
COPS7B-206ENST00000410017 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
COPS7B-206ENST00000410017 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
COPS7B-206ENST00000410017 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
COPS7B-206ENST00000410017 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
COPS7B-206ENST00000410017 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
COPS7B-206ENST00000410017 DCAF1Q9Y4B6 1507 aa26.98■■□□□ 1.91
COPS7B-206ENST00000410017 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
COPS7B-206ENST00000410017 ABCC9O60706 1549 aa26.72■■□□□ 1.87
COPS7B-206ENST00000410017 TRIM26Q12899 539 aaPredicted RBP26.56■■□□□ 1.84
COPS7B-206ENST00000410017 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.83
COPS7B-206ENST00000410017 PELP1Q8IZL8 1130 aaKnown RBP26.43■■□□□ 1.82
COPS7B-206ENST00000410017 ZEB1P37275 1124 aaPredicted RBP26.38■■□□□ 1.81
COPS7B-206ENST00000410017 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
COPS7B-206ENST00000410017 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
COPS7B-206ENST00000410017 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
COPS7B-206ENST00000410017 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
COPS7B-206ENST00000410017 NACADO15069 1562 aa25.67■■□□□ 1.7
COPS7B-206ENST00000410017 RB1CC1Q8TDY2 1594 aa25.66■■□□□ 1.7
COPS7B-206ENST00000410017 ACIN1Q9UKV3 1341 aaKnown RBP25.48■■□□□ 1.67
COPS7B-206ENST00000410017 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
COPS7B-206ENST00000410017 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
COPS7B-206ENST00000410017 MYT1Q01538 1121 aa25.4■■□□□ 1.66
COPS7B-206ENST00000410017 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
COPS7B-206ENST00000410017 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
COPS7B-206ENST00000410017 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
COPS7B-206ENST00000410017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.21■■□□□ 1.63
COPS7B-206ENST00000410017 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
COPS7B-206ENST00000410017 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
COPS7B-206ENST00000410017 GTF3C3Q9Y5Q9 886 aa25.13■■□□□ 1.61
COPS7B-206ENST00000410017 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
COPS7B-206ENST00000410017 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
COPS7B-206ENST00000410017 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.6
COPS7B-206ENST00000410017 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
COPS7B-206ENST00000410017 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
COPS7B-206ENST00000410017 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
COPS7B-206ENST00000410017 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
COPS7B-206ENST00000410017 WIZO95785 1651 aa24.95■■□□□ 1.58
COPS7B-206ENST00000410017 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
COPS7B-206ENST00000410017 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
COPS7B-206ENST00000410017 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
COPS7B-206ENST00000410017 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
COPS7B-206ENST00000410017 EEA1Q15075 1411 aa24.71■■□□□ 1.55
COPS7B-206ENST00000410017 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
COPS7B-206ENST00000410017 TOP2AP11388 1531 aaKnown RBP24.65■■□□□ 1.54
COPS7B-206ENST00000410017 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
COPS7B-206ENST00000410017 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
COPS7B-206ENST00000410017 SOGA1O94964 1423 aa24.55■■□□□ 1.52
COPS7B-206ENST00000410017 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
COPS7B-206ENST00000410017 SMARCA2P51531 1590 aa24.51■■□□□ 1.51
COPS7B-206ENST00000410017 MIER1Q8N108 512 aa24.5■■□□□ 1.51
COPS7B-206ENST00000410017 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
COPS7B-206ENST00000410017 YTHDC1Q96MU7 727 aaKnown RBP24.46■■□□□ 1.51
COPS7B-206ENST00000410017 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
COPS7B-206ENST00000410017 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
COPS7B-206ENST00000410017 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
COPS7B-206ENST00000410017 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
COPS7B-206ENST00000410017 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
COPS7B-206ENST00000410017 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
COPS7B-206ENST00000410017 KIF21BO75037 1637 aa24.27■■□□□ 1.48
COPS7B-206ENST00000410017 HNRNPUL2Q1KMD3 747 aaKnown RBP24.25■■□□□ 1.47
COPS7B-206ENST00000410017 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
COPS7B-206ENST00000410017 CLIP1P30622 1438 aa24.2■■□□□ 1.46
COPS7B-206ENST00000410017 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
COPS7B-206ENST00000410017 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
COPS7B-206ENST00000410017 APLP2Q06481 763 aa24.1■■□□□ 1.45
COPS7B-206ENST00000410017 SUPT16HQ9Y5B9 1047 aaKnown RBP24.07■■□□□ 1.44
COPS7B-206ENST00000410017 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
COPS7B-206ENST00000410017 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
COPS7B-206ENST00000410017 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
COPS7B-206ENST00000410017 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
COPS7B-206ENST00000410017 TSHZ2Q9NRE2 1034 aa23.88■■□□□ 1.41
COPS7B-206ENST00000410017 CUX2O14529 1486 aa23.84■■□□□ 1.41
COPS7B-206ENST00000410017 ANP32EQ9BTT0 268 aa23.83■■□□□ 1.41
COPS7B-206ENST00000410017 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.4
COPS7B-206ENST00000410017 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
COPS7B-206ENST00000410017 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
COPS7B-206ENST00000410017 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
COPS7B-206ENST00000410017 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
COPS7B-206ENST00000410017 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
COPS7B-206ENST00000410017 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
COPS7B-206ENST00000410017 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
COPS7B-206ENST00000410017 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
COPS7B-206ENST00000410017 CCNB3Q8WWL7 1395 aa23.61■■□□□ 1.37
COPS7B-206ENST00000410017 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
COPS7B-206ENST00000410017 RANGAP1P46060 587 aaPredicted RBP23.6■■□□□ 1.37
COPS7B-206ENST00000410017 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
COPS7B-206ENST00000410017 KCNH8Q96L42 1107 aa23.48■■□□□ 1.35
COPS7B-206ENST00000410017 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
COPS7B-206ENST00000410017 FKBP8Q14318 412 aa23.45■■□□□ 1.34
COPS7B-206ENST00000410017 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
COPS7B-206ENST00000410017 MAP3K1Q13233 1512 aa23.45■■□□□ 1.34
COPS7B-206ENST00000410017 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
COPS7B-206ENST00000410017 BCL11AQ9H165 835 aa23.42■■□□□ 1.34
COPS7B-206ENST00000410017 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
COPS7B-206ENST00000410017 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
COPS7B-206ENST00000410017 SETD5Q9C0A6 1442 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms