RNA–Protein interactions for RNA: ENST00000445323.6

MTMR1-208, Transcript of myotubularin related protein 1, humanhuman

TSL 1 (best) BASIC

Gene MTMR1, Length 4,516 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR1-208ENST00000445323 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
MTMR1-208ENST00000445323 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
MTMR1-208ENST00000445323 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
MTMR1-208ENST00000445323 PCGF6Q9BYE7 350 aa29.04■■■□□ 2.24
MTMR1-208ENST00000445323 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
MTMR1-208ENST00000445323 MYT1Q01538 1121 aa28.77■■■□□ 2.2
MTMR1-208ENST00000445323 HRCP23327 699 aa28.76■■■□□ 2.2
MTMR1-208ENST00000445323 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
MTMR1-208ENST00000445323 SHROOM4Q9ULL8 1493 aa28.43■■■□□ 2.14
MTMR1-208ENST00000445323 CENPBP07199 599 aaPredicted RBP27.93■■■□□ 2.06
MTMR1-208ENST00000445323 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
MTMR1-208ENST00000445323 ZEB1P37275 1124 aaPredicted RBP27.73■■■□□ 2.03
MTMR1-208ENST00000445323 YTHDC1Q96MU7 727 aaKnown RBP27.51■■■□□ 2
MTMR1-208ENST00000445323 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
MTMR1-208ENST00000445323 TRIM26Q12899 539 aaPredicted RBP27.34■■□□□ 1.97
MTMR1-208ENST00000445323 GTF3C3Q9Y5Q9 886 aa27.33■■□□□ 1.97
MTMR1-208ENST00000445323 CCER1Q8TC90 406 aaPredicted RBP27.25■■□□□ 1.95
MTMR1-208ENST00000445323 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
MTMR1-208ENST00000445323 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
MTMR1-208ENST00000445323 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
MTMR1-208ENST00000445323 ACIN1Q9UKV3 1341 aaKnown RBP27.04■■□□□ 1.92
MTMR1-208ENST00000445323 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
MTMR1-208ENST00000445323 ERICH6Q7L0X2 663 aa26.91■■□□□ 1.9
MTMR1-208ENST00000445323 DIEXFQ68CQ4 756 aaKnown RBP26.82■■□□□ 1.88
MTMR1-208ENST00000445323 NEUROD1Q13562 356 aa26.81■■□□□ 1.88
MTMR1-208ENST00000445323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.61■■□□□ 1.85
MTMR1-208ENST00000445323 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
MTMR1-208ENST00000445323 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
MTMR1-208ENST00000445323 NEFLP07196 543 aa26.31■■□□□ 1.8
MTMR1-208ENST00000445323 BCL11AQ9H165 835 aa26.26■■□□□ 1.79
MTMR1-208ENST00000445323 BCANQ96GW7 911 aa26.18■■□□□ 1.78
MTMR1-208ENST00000445323 APLP2Q06481 763 aa25.99■■□□□ 1.75
MTMR1-208ENST00000445323 ANP32EQ9BTT0 268 aa25.94■■□□□ 1.74
MTMR1-208ENST00000445323 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
MTMR1-208ENST00000445323 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
MTMR1-208ENST00000445323 HNRNPUL2Q1KMD3 747 aaKnown RBP25.77■■□□□ 1.72
MTMR1-208ENST00000445323 RANGAP1P46060 587 aaPredicted RBP25.7■■□□□ 1.7
MTMR1-208ENST00000445323 MIER1Q8N108 512 aa25.62■■□□□ 1.69
MTMR1-208ENST00000445323 UBTFP17480 764 aaKnown RBP25.6■■□□□ 1.69
MTMR1-208ENST00000445323 RTL5Q5HYW3 569 aaPredicted RBP25.6■■□□□ 1.69
MTMR1-208ENST00000445323 CSRNP3Q8WYN3 585 aa25.56■■□□□ 1.68
MTMR1-208ENST00000445323 FKBP8Q14318 412 aa25.47■■□□□ 1.67
MTMR1-208ENST00000445323 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.67
MTMR1-208ENST00000445323 EIF5BO60841 1220 aaKnown RBP25.42■■□□□ 1.66
MTMR1-208ENST00000445323 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
MTMR1-208ENST00000445323 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
MTMR1-208ENST00000445323 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
MTMR1-208ENST00000445323 SUPT16HQ9Y5B9 1047 aaKnown RBP25.29■■□□□ 1.64
MTMR1-208ENST00000445323 ITGAEP38570 1179 aa25.28■■□□□ 1.64
MTMR1-208ENST00000445323 NBR1Q14596 966 aa25.25■■□□□ 1.63
MTMR1-208ENST00000445323 PRKCSHP14314 528 aaPredicted RBP25.18■■□□□ 1.62
MTMR1-208ENST00000445323 TSHZ2Q9NRE2 1034 aa25.17■■□□□ 1.62
MTMR1-208ENST00000445323 MYT1LQ9UL68 1186 aa25.04■■□□□ 1.6
MTMR1-208ENST00000445323 RTN4Q9NQC3 1192 aaKnown RBP25.04■■□□□ 1.6
MTMR1-208ENST00000445323 DAXXQ9UER7 740 aaPredicted RBP25.04■■□□□ 1.6
MTMR1-208ENST00000445323 CNGB1Q14028 1251 aaPredicted RBP24.95■■□□□ 1.58
MTMR1-208ENST00000445323 RBM19Q9Y4C8 960 aaKnown RBP24.94■■□□□ 1.58
MTMR1-208ENST00000445323 TRIM52Q96A61 297 aa24.94■■□□□ 1.58
MTMR1-208ENST00000445323 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
MTMR1-208ENST00000445323 DEKP35659 375 aaKnown RBP24.89■■□□□ 1.58
MTMR1-208ENST00000445323 ABCC9O60706 1549 aa24.89■■□□□ 1.57
MTMR1-208ENST00000445323 IRX6P78412 446 aaPredicted RBP24.87■■□□□ 1.57
MTMR1-208ENST00000445323 ANP32AP39687 249 aaKnown RBP24.83■■□□□ 1.57
MTMR1-208ENST00000445323 ANP32CO43423 234 aa24.83■■□□□ 1.56
MTMR1-208ENST00000445323 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
MTMR1-208ENST00000445323 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
MTMR1-208ENST00000445323 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
MTMR1-208ENST00000445323 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.76■■□□□ 1.55
MTMR1-208ENST00000445323 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
MTMR1-208ENST00000445323 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.53
MTMR1-208ENST00000445323 HNRNPUQ00839 825 aaKnown RBP eCLIP24.62■■□□□ 1.53
MTMR1-208ENST00000445323 POLR3GLQ9BT43 218 aa24.62■■□□□ 1.53
MTMR1-208ENST00000445323 GLIPR1L2Q4G1C9 344 aa24.61■■□□□ 1.53
MTMR1-208ENST00000445323 ANO8Q9HCE9 1232 aaPredicted RBP24.6■■□□□ 1.53
MTMR1-208ENST00000445323 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
MTMR1-208ENST00000445323 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
MTMR1-208ENST00000445323 NOP58Q9Y2X3 529 aaKnown RBP24.43■■□□□ 1.5
MTMR1-208ENST00000445323 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
MTMR1-208ENST00000445323 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
MTMR1-208ENST00000445323 NEFMP07197 916 aa24.31■■□□□ 1.48
MTMR1-208ENST00000445323 LAS1LQ9Y4W2 734 aaKnown RBP24.3■■□□□ 1.48
MTMR1-208ENST00000445323 SALL2Q9Y467 1007 aaPredicted RBP24.28■■□□□ 1.48
MTMR1-208ENST00000445323 ARXQ96QS3 562 aa24.27■■□□□ 1.48
MTMR1-208ENST00000445323 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
MTMR1-208ENST00000445323 KCNH8Q96L42 1107 aa24.23■■□□□ 1.47
MTMR1-208ENST00000445323 B4GALNT3Q6L9W6 998 aa24.23■■□□□ 1.47
MTMR1-208ENST00000445323 FAM50AQ14320 339 aaKnown RBP24.22■■□□□ 1.47
MTMR1-208ENST00000445323 ERICH6BQ5W0A0 696 aa24.18■■□□□ 1.46
MTMR1-208ENST00000445323 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
MTMR1-208ENST00000445323 PPP4R2Q9NY27 417 aa24.09■■□□□ 1.45
MTMR1-208ENST00000445323 FBLN2P98095 1184 aa24.05■■□□□ 1.44
MTMR1-208ENST00000445323 CEP162Q5TB80 1403 aa24.02■■□□□ 1.44
MTMR1-208ENST00000445323 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
MTMR1-208ENST00000445323 FANCIQ9NVI1 1328 aa24.01■■□□□ 1.43
MTMR1-208ENST00000445323 IL27Q8NEV9 243 aa24.01■■□□□ 1.43
MTMR1-208ENST00000445323 MSH5O43196 834 aa23.96■■□□□ 1.43
MTMR1-208ENST00000445323 NAP1L5Q96NT1 182 aaPredicted RBP23.96■■□□□ 1.43
MTMR1-208ENST00000445323 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
MTMR1-208ENST00000445323 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
MTMR1-208ENST00000445323 MRS2Q9HD23 443 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms