RNA–Protein interactions for RNA: ENST00000404241.6

ATF4-203, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATF4, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-203ENST00000404241 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
ATF4-203ENST00000404241 ABCC9O60706 1549 aa30.02■■■□□ 2.4
ATF4-203ENST00000404241 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
ATF4-203ENST00000404241 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
ATF4-203ENST00000404241 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
ATF4-203ENST00000404241 NACADO15069 1562 aa28.17■■■□□ 2.1
ATF4-203ENST00000404241 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
ATF4-203ENST00000404241 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
ATF4-203ENST00000404241 PABPN1Q86U42 306 aaKnown RBP eCLIP27.86■■■□□ 2.05
ATF4-203ENST00000404241 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
ATF4-203ENST00000404241 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
ATF4-203ENST00000404241 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
ATF4-203ENST00000404241 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
ATF4-203ENST00000404241 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
ATF4-203ENST00000404241 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
ATF4-203ENST00000404241 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
ATF4-203ENST00000404241 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
ATF4-203ENST00000404241 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
ATF4-203ENST00000404241 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
ATF4-203ENST00000404241 CUX2O14529 1486 aa26.06■■□□□ 1.76
ATF4-203ENST00000404241 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
ATF4-203ENST00000404241 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
ATF4-203ENST00000404241 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
ATF4-203ENST00000404241 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
ATF4-203ENST00000404241 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
ATF4-203ENST00000404241 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
ATF4-203ENST00000404241 NESP48681 1621 aa25.67■■□□□ 1.7
ATF4-203ENST00000404241 BAZ1BQ9UIG0 1483 aaKnown RBP25.59■■□□□ 1.69
ATF4-203ENST00000404241 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
ATF4-203ENST00000404241 THOC2Q8NI27 1593 aaKnown RBP25.53■■□□□ 1.68
ATF4-203ENST00000404241 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
ATF4-203ENST00000404241 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
ATF4-203ENST00000404241 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
ATF4-203ENST00000404241 PDS5BQ9NTI5 1447 aa25.33■■□□□ 1.65
ATF4-203ENST00000404241 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
ATF4-203ENST00000404241 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
ATF4-203ENST00000404241 MRC2Q9UBG0 1479 aa25.13■■□□□ 1.61
ATF4-203ENST00000404241 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
ATF4-203ENST00000404241 WDR62O43379 1518 aa25.09■■□□□ 1.61
ATF4-203ENST00000404241 WIZO95785 1651 aa25.03■■□□□ 1.6
ATF4-203ENST00000404241 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
ATF4-203ENST00000404241 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
ATF4-203ENST00000404241 CFTRP13569 1480 aa24.8■■□□□ 1.56
ATF4-203ENST00000404241 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
ATF4-203ENST00000404241 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.55
ATF4-203ENST00000404241 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
ATF4-203ENST00000404241 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
ATF4-203ENST00000404241 PRDM2Q13029 1718 aa24.64■■□□□ 1.53
ATF4-203ENST00000404241 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
ATF4-203ENST00000404241 RIMBP3BA6NNM3 1639 aa24.54■■□□□ 1.52
ATF4-203ENST00000404241 RIMBP3Q9UFD9 1639 aa24.54■■□□□ 1.52
ATF4-203ENST00000404241 IFT140Q96RY7 1462 aa24.48■■□□□ 1.51
ATF4-203ENST00000404241 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
ATF4-203ENST00000404241 ARHGEF11O15085 1522 aa24.39■■□□□ 1.5
ATF4-203ENST00000404241 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
ATF4-203ENST00000404241 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
ATF4-203ENST00000404241 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
ATF4-203ENST00000404241 ABCC8Q09428 1581 aa24.33■■□□□ 1.49
ATF4-203ENST00000404241 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
ATF4-203ENST00000404241 CHD1O14646 1710 aa24.26■■□□□ 1.47
ATF4-203ENST00000404241 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
ATF4-203ENST00000404241 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
ATF4-203ENST00000404241 AQRO60306 1485 aaKnown RBP eCLIP24.17■■□□□ 1.463e-11■■■■■ 47.8
ATF4-203ENST00000404241 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
ATF4-203ENST00000404241 FBLN2P98095 1184 aa24.1■■□□□ 1.45
ATF4-203ENST00000404241 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
ATF4-203ENST00000404241 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
ATF4-203ENST00000404241 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
ATF4-203ENST00000404241 SOGA1O94964 1423 aa23.98■■□□□ 1.43
ATF4-203ENST00000404241 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
ATF4-203ENST00000404241 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
ATF4-203ENST00000404241 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
ATF4-203ENST00000404241 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
ATF4-203ENST00000404241 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
ATF4-203ENST00000404241 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
ATF4-203ENST00000404241 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
ATF4-203ENST00000404241 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
ATF4-203ENST00000404241 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
ATF4-203ENST00000404241 CUX1P39880 1505 aa23.81■■□□□ 1.4
ATF4-203ENST00000404241 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
ATF4-203ENST00000404241 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
ATF4-203ENST00000404241 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
ATF4-203ENST00000404241 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
ATF4-203ENST00000404241 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
ATF4-203ENST00000404241 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
ATF4-203ENST00000404241 GRIN2AQ12879 1464 aa23.52■■□□□ 1.36
ATF4-203ENST00000404241 ERCC6L2Q5T890 1561 aa23.51■■□□□ 1.35
ATF4-203ENST00000404241 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
ATF4-203ENST00000404241 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
ATF4-203ENST00000404241 NUP160Q12769 1436 aa23.44■■□□□ 1.34
ATF4-203ENST00000404241 WRNQ14191 1432 aaPredicted RBP eCLIP23.44■■□□□ 1.34
ATF4-203ENST00000404241 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
ATF4-203ENST00000404241 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
ATF4-203ENST00000404241 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
ATF4-203ENST00000404241 TOP2BQ02880 1626 aa23.35■■□□□ 1.33
ATF4-203ENST00000404241 KIF13AQ9H1H9 1805 aa23.35■■□□□ 1.33
ATF4-203ENST00000404241 ERICH3Q5RHP9 1530 aa23.32■■□□□ 1.32
ATF4-203ENST00000404241 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
ATF4-203ENST00000404241 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
ATF4-203ENST00000404241 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms