RNA–Protein interactions for RNA: ENST00000413728.6

ARHGEF3-203, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-203ENST00000413728 NISCHQ9Y2I1 1504 aa12.07□□□□□ -0.48
ARHGEF3-203ENST00000413728 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
ARHGEF3-203ENST00000413728 ZCCHC6Q5VYS8 1495 aaKnown RBP10.25□□□□□ -0.77
ARHGEF3-203ENST00000413728 DCAF1Q9Y4B6 1507 aa10.15□□□□□ -0.78
ARHGEF3-203ENST00000413728 MYO15BQ96JP2 1530 aa9.94□□□□□ -0.82
ARHGEF3-203ENST00000413728 SHROOM4Q9ULL8 1493 aa9.68□□□□□ -0.86
ARHGEF3-203ENST00000413728 ABCC9O60706 1549 aa9.68□□□□□ -0.86
ARHGEF3-203ENST00000413728 NACADO15069 1562 aa9.66□□□□□ -0.86
ARHGEF3-203ENST00000413728 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
ARHGEF3-203ENST00000413728 RB1CC1Q8TDY2 1594 aa9.46□□□□□ -0.89
ARHGEF3-203ENST00000413728 SUPT5HO00267 1087 aaKnown RBP9.42□□□□□ -0.9
ARHGEF3-203ENST00000413728 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF3-203ENST00000413728 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
ARHGEF3-203ENST00000413728 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
ARHGEF3-203ENST00000413728 UNC13AQ9UPW8 1703 aa9.35□□□□□ -0.91
ARHGEF3-203ENST00000413728 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
ARHGEF3-203ENST00000413728 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
ARHGEF3-203ENST00000413728 MROH2BQ7Z745 1585 aa9.27□□□□□ -0.93
ARHGEF3-203ENST00000413728 SMARCA4P51532 1647 aa9.24□□□□□ -0.93
ARHGEF3-203ENST00000413728 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
ARHGEF3-203ENST00000413728 PEG3Q9GZU2 1588 aa9.23□□□□□ -0.93
ARHGEF3-203ENST00000413728 TOP2AP11388 1531 aaKnown RBP9.22□□□□□ -0.93
ARHGEF3-203ENST00000413728 WIZO95785 1651 aa9.22□□□□□ -0.93
ARHGEF3-203ENST00000413728 BICRAQ9NZM4 1560 aa9.19□□□□□ -0.94
ARHGEF3-203ENST00000413728 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
ARHGEF3-203ENST00000413728 CCDC88BA6NC98 1476 aa9.02□□□□□ -0.97
ARHGEF3-203ENST00000413728 EEA1Q15075 1411 aa8.97□□□□□ -0.97
ARHGEF3-203ENST00000413728 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
ARHGEF3-203ENST00000413728 ATAD2BQ9ULI0 1458 aa8.95□□□□□ -0.98
ARHGEF3-203ENST00000413728 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
ARHGEF3-203ENST00000413728 HRCP23327 699 aa8.9□□□□□ -0.98
ARHGEF3-203ENST00000413728 PRDM2Q13029 1718 aa8.9□□□□□ -0.99
ARHGEF3-203ENST00000413728 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
ARHGEF3-203ENST00000413728 BAZ1BQ9UIG0 1483 aaKnown RBP8.88□□□□□ -0.99
ARHGEF3-203ENST00000413728 WRNQ14191 1432 aaPredicted RBP eCLIP8.88□□□□□ -0.99
ARHGEF3-203ENST00000413728 ABCC8Q09428 1581 aa8.88□□□□□ -0.99
ARHGEF3-203ENST00000413728 KIF21BO75037 1637 aa8.87□□□□□ -0.99
ARHGEF3-203ENST00000413728 NCAPD3P42695 1498 aa8.87□□□□□ -0.99
ARHGEF3-203ENST00000413728 LOC105371045A0A1W2PR82 267 aa8.86□□□□□ -0.99
ARHGEF3-203ENST00000413728 TOP2BQ02880 1626 aa8.84□□□□□ -0.99
ARHGEF3-203ENST00000413728 TRIM26Q12899 539 aaPredicted RBP8.83□□□□□ -1
ARHGEF3-203ENST00000413728 SYNJ1O43426 1573 aa8.83□□□□□ -1
ARHGEF3-203ENST00000413728 TNIKQ9UKE5 1360 aa8.8□□□□□ -1
ARHGEF3-203ENST00000413728 GOLGA3Q08378 1498 aa8.78□□□□□ -1
ARHGEF3-203ENST00000413728 CEP164Q9UPV0 1460 aa8.76□□□□□ -1.01
ARHGEF3-203ENST00000413728 ERICH3Q5RHP9 1530 aa8.76□□□□□ -1.01
ARHGEF3-203ENST00000413728 PCGF6Q9BYE7 350 aa8.75□□□□□ -1.01
ARHGEF3-203ENST00000413728 CFTRP13569 1480 aa8.74□□□□□ -1.01
ARHGEF3-203ENST00000413728 SOGA1O94964 1423 aa8.74□□□□□ -1.01
ARHGEF3-203ENST00000413728 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
ARHGEF3-203ENST00000413728 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
ARHGEF3-203ENST00000413728 ZEB1P37275 1124 aaPredicted RBP8.69□□□□□ -1.02
ARHGEF3-203ENST00000413728 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
ARHGEF3-203ENST00000413728 CSRNP3Q8WYN3 585 aa8.68□□□□□ -1.02
ARHGEF3-203ENST00000413728 CUX1P39880 1505 aa8.68□□□□□ -1.02
ARHGEF3-203ENST00000413728 PRXQ9BXM0 1461 aa8.67□□□□□ -1.02
ARHGEF3-203ENST00000413728 FAM9AQ8IZU1 332 aaPredicted RBP8.62□□□□□ -1.03
ARHGEF3-203ENST00000413728 VPS8Q8N3P4 1428 aa8.61□□□□□ -1.03
ARHGEF3-203ENST00000413728 CC2D2AQ9P2K1 1620 aa8.61□□□□□ -1.03
ARHGEF3-203ENST00000413728 RAPGEF2Q9Y4G8 1499 aa8.59□□□□□ -1.03
ARHGEF3-203ENST00000413728 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
ARHGEF3-203ENST00000413728 CLIP1P30622 1438 aa8.57□□□□□ -1.04
ARHGEF3-203ENST00000413728 KIF27Q86VH2 1401 aa8.57□□□□□ -1.04
ARHGEF3-203ENST00000413728 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
ARHGEF3-203ENST00000413728 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
ARHGEF3-203ENST00000413728 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
ARHGEF3-203ENST00000413728 LAMC3Q9Y6N6 1575 aa8.55□□□□□ -1.04
ARHGEF3-203ENST00000413728 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
ARHGEF3-203ENST00000413728 CUL7Q14999 1698 aa8.53□□□□□ -1.04
ARHGEF3-203ENST00000413728 ABCA10Q8WWZ4 1543 aa8.51□□□□□ -1.05
ARHGEF3-203ENST00000413728 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
ARHGEF3-203ENST00000413728 FANCD2Q9BXW9 1451 aa8.48□□□□□ -1.05
ARHGEF3-203ENST00000413728 CFAP43Q8NDM7 1665 aa8.48□□□□□ -1.05
ARHGEF3-203ENST00000413728 CUX2O14529 1486 aa8.48□□□□□ -1.05
ARHGEF3-203ENST00000413728 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
ARHGEF3-203ENST00000413728 EFCAB5A4FU69 1503 aa8.47□□□□□ -1.05
ARHGEF3-203ENST00000413728 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
ARHGEF3-203ENST00000413728 TOPBP1Q92547 1522 aa8.46□□□□□ -1.05
ARHGEF3-203ENST00000413728 ARHGAP35Q9NRY4 1499 aa8.46□□□□□ -1.06
ARHGEF3-203ENST00000413728 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
ARHGEF3-203ENST00000413728 KIF21AQ7Z4S6 1674 aa8.45□□□□□ -1.06
ARHGEF3-203ENST00000413728 UBTFP17480 764 aaKnown RBP8.45□□□□□ -1.06
ARHGEF3-203ENST00000413728 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
ARHGEF3-203ENST00000413728 IGF1RP08069 1367 aa8.45□□□□□ -1.06
ARHGEF3-203ENST00000413728 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.06
ARHGEF3-203ENST00000413728 POLA1P09884 1462 aaPredicted RBP8.43□□□□□ -1.06
ARHGEF3-203ENST00000413728 TIAM1Q13009 1591 aa8.42□□□□□ -1.06
ARHGEF3-203ENST00000413728 THOC2Q8NI27 1593 aaKnown RBP8.41□□□□□ -1.06
ARHGEF3-203ENST00000413728 SAMD9Q5K651 1589 aa8.4□□□□□ -1.06
ARHGEF3-203ENST00000413728 CLSPNQ9HAW4 1339 aa8.4□□□□□ -1.06
ARHGEF3-203ENST00000413728 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
ARHGEF3-203ENST00000413728 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
ARHGEF3-203ENST00000413728 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
ARHGEF3-203ENST00000413728 FHAD1B1AJZ9 1412 aa8.38□□□□□ -1.07
ARHGEF3-203ENST00000413728 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
ARHGEF3-203ENST00000413728 PDS5BQ9NTI5 1447 aa8.36□□□□□ -1.07
ARHGEF3-203ENST00000413728 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
ARHGEF3-203ENST00000413728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
ARHGEF3-203ENST00000413728 PBRM1Q86U86 1689 aa8.35□□□□□ -1.07
ARHGEF3-203ENST00000413728 EHMT2Q96KQ7 1210 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms