RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
ARHGEF3-201ENST00000296315 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
ARHGEF3-201ENST00000296315 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
ARHGEF3-201ENST00000296315 PPARGC1BQ86YN6 1023 aaKnown RBP17.4■□□□□ 0.38
ARHGEF3-201ENST00000296315 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
ARHGEF3-201ENST00000296315 HRCP23327 699 aa17.34■□□□□ 0.37
ARHGEF3-201ENST00000296315 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
ARHGEF3-201ENST00000296315 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
ARHGEF3-201ENST00000296315 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
ARHGEF3-201ENST00000296315 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
ARHGEF3-201ENST00000296315 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
ARHGEF3-201ENST00000296315 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
ARHGEF3-201ENST00000296315 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
ARHGEF3-201ENST00000296315 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF3-201ENST00000296315 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF3-201ENST00000296315 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF3-201ENST00000296315 ZEB1P37275 1124 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF3-201ENST00000296315 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
ARHGEF3-201ENST00000296315 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
ARHGEF3-201ENST00000296315 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
ARHGEF3-201ENST00000296315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF3-201ENST00000296315 YTHDC1Q96MU7 727 aaKnown RBP16.12■□□□□ 0.17
ARHGEF3-201ENST00000296315 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF3-201ENST00000296315 ACIN1Q9UKV3 1341 aaKnown RBP16.08■□□□□ 0.16
ARHGEF3-201ENST00000296315 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
ARHGEF3-201ENST00000296315 CENPBP07199 599 aaPredicted RBP16■□□□□ 0.15
ARHGEF3-201ENST00000296315 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
ARHGEF3-201ENST00000296315 ZCCHC6Q5VYS8 1495 aaKnown RBP15.88■□□□□ 0.13
ARHGEF3-201ENST00000296315 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
ARHGEF3-201ENST00000296315 MYT1Q01538 1121 aa15.85■□□□□ 0.13
ARHGEF3-201ENST00000296315 MIER1Q8N108 512 aa15.54■□□□□ 0.08
ARHGEF3-201ENST00000296315 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
ARHGEF3-201ENST00000296315 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF3-201ENST00000296315 ABCC9O60706 1549 aa15.51■□□□□ 0.07
ARHGEF3-201ENST00000296315 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF3-201ENST00000296315 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
ARHGEF3-201ENST00000296315 BCANQ96GW7 911 aa15.38■□□□□ 0.05
ARHGEF3-201ENST00000296315 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
ARHGEF3-201ENST00000296315 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF3-201ENST00000296315 RB1CC1Q8TDY2 1594 aa15.22■□□□□ 0.03
ARHGEF3-201ENST00000296315 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
ARHGEF3-201ENST00000296315 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
ARHGEF3-201ENST00000296315 APLP2Q06481 763 aa15.17■□□□□ 0.02
ARHGEF3-201ENST00000296315 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
ARHGEF3-201ENST00000296315 ANP32EQ9BTT0 268 aa15.14■□□□□ 0.01
ARHGEF3-201ENST00000296315 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
ARHGEF3-201ENST00000296315 TSHZ2Q9NRE2 1034 aa15.12■□□□□ 0.01
ARHGEF3-201ENST00000296315 ITGAEP38570 1179 aa15.08■□□□□ 0
ARHGEF3-201ENST00000296315 CEP162Q5TB80 1403 aa15.04■□□□□ -0
ARHGEF3-201ENST00000296315 FKBP8Q14318 412 aa15.03■□□□□ -0
ARHGEF3-201ENST00000296315 KCNH8Q96L42 1107 aa15.03■□□□□ -0
ARHGEF3-201ENST00000296315 CECR2Q9BXF3 1484 aa15.02□□□□□ -0.01
ARHGEF3-201ENST00000296315 NEFLP07196 543 aa14.93□□□□□ -0.02
ARHGEF3-201ENST00000296315 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
ARHGEF3-201ENST00000296315 SOGA1O94964 1423 aa14.92□□□□□ -0.02
ARHGEF3-201ENST00000296315 TRIM52Q96A61 297 aa14.9□□□□□ -0.02
ARHGEF3-201ENST00000296315 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF3-201ENST00000296315 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
ARHGEF3-201ENST00000296315 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
ARHGEF3-201ENST00000296315 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
ARHGEF3-201ENST00000296315 IRX6P78412 446 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF3-201ENST00000296315 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
ARHGEF3-201ENST00000296315 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
ARHGEF3-201ENST00000296315 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
ARHGEF3-201ENST00000296315 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
ARHGEF3-201ENST00000296315 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.05
ARHGEF3-201ENST00000296315 CLSPNQ9HAW4 1339 aa14.76□□□□□ -0.05
ARHGEF3-201ENST00000296315 WIZO95785 1651 aa14.74□□□□□ -0.05
ARHGEF3-201ENST00000296315 CLIP1P30622 1438 aa14.7□□□□□ -0.06
ARHGEF3-201ENST00000296315 ATP1B4Q9UN42 357 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF3-201ENST00000296315 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF3-201ENST00000296315 NACADO15069 1562 aa14.66□□□□□ -0.06
ARHGEF3-201ENST00000296315 NBR1Q14596 966 aa14.64□□□□□ -0.07
ARHGEF3-201ENST00000296315 MSH5O43196 834 aa14.63□□□□□ -0.07
ARHGEF3-201ENST00000296315 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
ARHGEF3-201ENST00000296315 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
ARHGEF3-201ENST00000296315 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF3-201ENST00000296315 DHX57Q6P158 1386 aaKnown RBP14.62□□□□□ -0.07
ARHGEF3-201ENST00000296315 CDK11AQ9UQ88 783 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF3-201ENST00000296315 ANP32CO43423 234 aa14.59□□□□□ -0.07
ARHGEF3-201ENST00000296315 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
ARHGEF3-201ENST00000296315 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
ARHGEF3-201ENST00000296315 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
ARHGEF3-201ENST00000296315 VPS8Q8N3P4 1428 aa14.51□□□□□ -0.09
ARHGEF3-201ENST00000296315 DEKP35659 375 aaKnown RBP14.51□□□□□ -0.09
ARHGEF3-201ENST00000296315 RTN4Q9NQC3 1192 aaKnown RBP14.48□□□□□ -0.09
ARHGEF3-201ENST00000296315 PRKCSHP14314 528 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-201ENST00000296315 EEA1Q15075 1411 aa14.46□□□□□ -0.09
ARHGEF3-201ENST00000296315 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.1
ARHGEF3-201ENST00000296315 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
ARHGEF3-201ENST00000296315 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
ARHGEF3-201ENST00000296315 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF3-201ENST00000296315 RAPGEF2Q9Y4G8 1499 aa14.42□□□□□ -0.1
ARHGEF3-201ENST00000296315 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
ARHGEF3-201ENST00000296315 ANO8Q9HCE9 1232 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF3-201ENST00000296315 CCDC136Q96JN2 1154 aa14.4□□□□□ -0.1
ARHGEF3-201ENST00000296315 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
ARHGEF3-201ENST00000296315 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
ARHGEF3-201ENST00000296315 NPM2Q86SE8 214 aaKnown RBP14.36□□□□□ -0.11
ARHGEF3-201ENST00000296315 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms