RNA–Protein interactions for RNA: ENST00000409091.5

COPS7B-204, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5 BASIC

Gene COPS7B, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-204ENST00000409091 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
COPS7B-204ENST00000409091 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
COPS7B-204ENST00000409091 ABCC9O60706 1549 aa28.99■■■□□ 2.23
COPS7B-204ENST00000409091 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
COPS7B-204ENST00000409091 NACADO15069 1562 aa27.86■■■□□ 2.05
COPS7B-204ENST00000409091 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
COPS7B-204ENST00000409091 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
COPS7B-204ENST00000409091 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
COPS7B-204ENST00000409091 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
COPS7B-204ENST00000409091 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
COPS7B-204ENST00000409091 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
COPS7B-204ENST00000409091 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
COPS7B-204ENST00000409091 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
COPS7B-204ENST00000409091 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
COPS7B-204ENST00000409091 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
COPS7B-204ENST00000409091 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
COPS7B-204ENST00000409091 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
COPS7B-204ENST00000409091 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
COPS7B-204ENST00000409091 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
COPS7B-204ENST00000409091 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
COPS7B-204ENST00000409091 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
COPS7B-204ENST00000409091 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
COPS7B-204ENST00000409091 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
COPS7B-204ENST00000409091 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
COPS7B-204ENST00000409091 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
COPS7B-204ENST00000409091 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
COPS7B-204ENST00000409091 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
COPS7B-204ENST00000409091 WIZO95785 1651 aa25.18■■□□□ 1.62
COPS7B-204ENST00000409091 ERCC6Q03468 1493 aa25.11■■□□□ 1.61
COPS7B-204ENST00000409091 RSF1Q96T23 1441 aaPredicted RBP25.08■■□□□ 1.61
COPS7B-204ENST00000409091 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
COPS7B-204ENST00000409091 NESP48681 1621 aa25■■□□□ 1.59
COPS7B-204ENST00000409091 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
COPS7B-204ENST00000409091 CUX2O14529 1486 aa24.94■■□□□ 1.58
COPS7B-204ENST00000409091 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
COPS7B-204ENST00000409091 CADPSQ9ULU8 1353 aa24.88■■□□□ 1.57
COPS7B-204ENST00000409091 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
COPS7B-204ENST00000409091 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
COPS7B-204ENST00000409091 CFTRP13569 1480 aa24.7■■□□□ 1.54
COPS7B-204ENST00000409091 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
COPS7B-204ENST00000409091 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
COPS7B-204ENST00000409091 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
COPS7B-204ENST00000409091 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
COPS7B-204ENST00000409091 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
COPS7B-204ENST00000409091 WDR62O43379 1518 aa24.55■■□□□ 1.52
COPS7B-204ENST00000409091 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
COPS7B-204ENST00000409091 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
COPS7B-204ENST00000409091 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
COPS7B-204ENST00000409091 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
COPS7B-204ENST00000409091 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
COPS7B-204ENST00000409091 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
COPS7B-204ENST00000409091 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
COPS7B-204ENST00000409091 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
COPS7B-204ENST00000409091 TARBP1Q13395 1621 aaKnown RBP23.94■■□□□ 1.42
COPS7B-204ENST00000409091 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
COPS7B-204ENST00000409091 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
COPS7B-204ENST00000409091 CUX1P39880 1505 aa23.89■■□□□ 1.42
COPS7B-204ENST00000409091 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
COPS7B-204ENST00000409091 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
COPS7B-204ENST00000409091 SOGA1O94964 1423 aa23.84■■□□□ 1.41
COPS7B-204ENST00000409091 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
COPS7B-204ENST00000409091 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
COPS7B-204ENST00000409091 AQRO60306 1485 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■■■■ 29.8
COPS7B-204ENST00000409091 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
COPS7B-204ENST00000409091 TOP2BQ02880 1626 aa23.71■■□□□ 1.39
COPS7B-204ENST00000409091 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
COPS7B-204ENST00000409091 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
COPS7B-204ENST00000409091 CHD1O14646 1710 aa23.67■■□□□ 1.38
COPS7B-204ENST00000409091 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
COPS7B-204ENST00000409091 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
COPS7B-204ENST00000409091 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
COPS7B-204ENST00000409091 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
COPS7B-204ENST00000409091 PBRM1Q86U86 1689 aa23.62■■□□□ 1.37
COPS7B-204ENST00000409091 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
COPS7B-204ENST00000409091 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
COPS7B-204ENST00000409091 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
COPS7B-204ENST00000409091 FBLN2P98095 1184 aa23.54■■□□□ 1.36
COPS7B-204ENST00000409091 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
COPS7B-204ENST00000409091 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
COPS7B-204ENST00000409091 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
COPS7B-204ENST00000409091 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
COPS7B-204ENST00000409091 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
COPS7B-204ENST00000409091 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
COPS7B-204ENST00000409091 ERICH3Q5RHP9 1530 aa23.41■■□□□ 1.34
COPS7B-204ENST00000409091 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
COPS7B-204ENST00000409091 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
COPS7B-204ENST00000409091 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
COPS7B-204ENST00000409091 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.33
COPS7B-204ENST00000409091 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
COPS7B-204ENST00000409091 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
COPS7B-204ENST00000409091 NUP160Q12769 1436 aa23.21■■□□□ 1.31
COPS7B-204ENST00000409091 CUL7Q14999 1698 aa23.21■■□□□ 1.31
COPS7B-204ENST00000409091 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
COPS7B-204ENST00000409091 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
COPS7B-204ENST00000409091 CYB5RLQ6IPT4 315 aa23.14■■□□□ 1.29
COPS7B-204ENST00000409091 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
COPS7B-204ENST00000409091 IGF1RP08069 1367 aa23.09■■□□□ 1.29
COPS7B-204ENST00000409091 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
COPS7B-204ENST00000409091 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
COPS7B-204ENST00000409091 KIAA0586Q9BVV6 1533 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms