RNA–Protein interactions for RNA: ENST00000495373.5

ARHGEF3-212, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 2,024 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-212ENST00000495373 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
ARHGEF3-212ENST00000495373 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
ARHGEF3-212ENST00000495373 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
ARHGEF3-212ENST00000495373 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
ARHGEF3-212ENST00000495373 ABCC9O60706 1549 aa28.4■■■□□ 2.14
ARHGEF3-212ENST00000495373 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
ARHGEF3-212ENST00000495373 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.09
ARHGEF3-212ENST00000495373 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
ARHGEF3-212ENST00000495373 NACADO15069 1562 aa27.75■■■□□ 2.03
ARHGEF3-212ENST00000495373 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
ARHGEF3-212ENST00000495373 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
ARHGEF3-212ENST00000495373 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
ARHGEF3-212ENST00000495373 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
ARHGEF3-212ENST00000495373 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
ARHGEF3-212ENST00000495373 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.89
ARHGEF3-212ENST00000495373 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
ARHGEF3-212ENST00000495373 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.86
ARHGEF3-212ENST00000495373 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
ARHGEF3-212ENST00000495373 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
ARHGEF3-212ENST00000495373 WIZO95785 1651 aa26.37■■□□□ 1.81
ARHGEF3-212ENST00000495373 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
ARHGEF3-212ENST00000495373 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
ARHGEF3-212ENST00000495373 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
ARHGEF3-212ENST00000495373 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
ARHGEF3-212ENST00000495373 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
ARHGEF3-212ENST00000495373 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
ARHGEF3-212ENST00000495373 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
ARHGEF3-212ENST00000495373 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
ARHGEF3-212ENST00000495373 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
ARHGEF3-212ENST00000495373 NCAPD3P42695 1498 aa25.67■■□□□ 1.7
ARHGEF3-212ENST00000495373 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
ARHGEF3-212ENST00000495373 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
ARHGEF3-212ENST00000495373 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
ARHGEF3-212ENST00000495373 DNAJC5BQ9UF47 199 aa25.29■■□□□ 1.64
ARHGEF3-212ENST00000495373 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
ARHGEF3-212ENST00000495373 CFTRP13569 1480 aa25.12■■□□□ 1.61
ARHGEF3-212ENST00000495373 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
ARHGEF3-212ENST00000495373 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
ARHGEF3-212ENST00000495373 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
ARHGEF3-212ENST00000495373 NESP48681 1621 aa24.99■■□□□ 1.59
ARHGEF3-212ENST00000495373 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF3-212ENST00000495373 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
ARHGEF3-212ENST00000495373 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
ARHGEF3-212ENST00000495373 CUX1P39880 1505 aa24.83■■□□□ 1.56
ARHGEF3-212ENST00000495373 SOGA1O94964 1423 aa24.82■■□□□ 1.56
ARHGEF3-212ENST00000495373 TOP2BQ02880 1626 aa24.81■■□□□ 1.56
ARHGEF3-212ENST00000495373 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
ARHGEF3-212ENST00000495373 BIVM-ERCC5R4GMW8 1640 aa24.78■■□□□ 1.56
ARHGEF3-212ENST00000495373 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
ARHGEF3-212ENST00000495373 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
ARHGEF3-212ENST00000495373 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
ARHGEF3-212ENST00000495373 KIF21AQ7Z4S6 1674 aa24.61■■□□□ 1.53
ARHGEF3-212ENST00000495373 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.53
ARHGEF3-212ENST00000495373 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
ARHGEF3-212ENST00000495373 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
ARHGEF3-212ENST00000495373 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
ARHGEF3-212ENST00000495373 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
ARHGEF3-212ENST00000495373 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
ARHGEF3-212ENST00000495373 CSRNP3Q8WYN3 585 aa24.51■■□□□ 1.51
ARHGEF3-212ENST00000495373 EEA1Q15075 1411 aa24.49■■□□□ 1.51
ARHGEF3-212ENST00000495373 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
ARHGEF3-212ENST00000495373 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
ARHGEF3-212ENST00000495373 CUX2O14529 1486 aa24.35■■□□□ 1.49
ARHGEF3-212ENST00000495373 KIF27Q86VH2 1401 aa24.33■■□□□ 1.48
ARHGEF3-212ENST00000495373 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
ARHGEF3-212ENST00000495373 KIF21BO75037 1637 aa24.29■■□□□ 1.48
ARHGEF3-212ENST00000495373 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
ARHGEF3-212ENST00000495373 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
ARHGEF3-212ENST00000495373 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
ARHGEF3-212ENST00000495373 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
ARHGEF3-212ENST00000495373 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
ARHGEF3-212ENST00000495373 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
ARHGEF3-212ENST00000495373 IGF1RP08069 1367 aa24.21■■□□□ 1.47
ARHGEF3-212ENST00000495373 UBTFP17480 764 aaKnown RBP24.2■■□□□ 1.46
ARHGEF3-212ENST00000495373 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
ARHGEF3-212ENST00000495373 WDR62O43379 1518 aa24.18■■□□□ 1.46
ARHGEF3-212ENST00000495373 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
ARHGEF3-212ENST00000495373 THOC2Q8NI27 1593 aaKnown RBP24.18■■□□□ 1.46
ARHGEF3-212ENST00000495373 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
ARHGEF3-212ENST00000495373 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
ARHGEF3-212ENST00000495373 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
ARHGEF3-212ENST00000495373 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
ARHGEF3-212ENST00000495373 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
ARHGEF3-212ENST00000495373 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
ARHGEF3-212ENST00000495373 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
ARHGEF3-212ENST00000495373 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
ARHGEF3-212ENST00000495373 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
ARHGEF3-212ENST00000495373 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
ARHGEF3-212ENST00000495373 CLIP1P30622 1438 aa23.91■■□□□ 1.42
ARHGEF3-212ENST00000495373 CUL7Q14999 1698 aa23.91■■□□□ 1.42
ARHGEF3-212ENST00000495373 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
ARHGEF3-212ENST00000495373 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
ARHGEF3-212ENST00000495373 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
ARHGEF3-212ENST00000495373 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
ARHGEF3-212ENST00000495373 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
ARHGEF3-212ENST00000495373 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
ARHGEF3-212ENST00000495373 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
ARHGEF3-212ENST00000495373 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
ARHGEF3-212ENST00000495373 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
ARHGEF3-212ENST00000495373 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms