RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
TRAPPC12-210ENST00000441983 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
TRAPPC12-210ENST00000441983 ABCC9O60706 1549 aa30.99■■■□□ 2.55
TRAPPC12-210ENST00000441983 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
TRAPPC12-210ENST00000441983 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
TRAPPC12-210ENST00000441983 NACADO15069 1562 aa30.24■■■□□ 2.43
TRAPPC12-210ENST00000441983 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
TRAPPC12-210ENST00000441983 RB1CC1Q8TDY2 1594 aa30.17■■■□□ 2.42
TRAPPC12-210ENST00000441983 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
TRAPPC12-210ENST00000441983 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
TRAPPC12-210ENST00000441983 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
TRAPPC12-210ENST00000441983 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
TRAPPC12-210ENST00000441983 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
TRAPPC12-210ENST00000441983 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
TRAPPC12-210ENST00000441983 EIF4G1Q04637 1599 aaKnown RBP28.4■■■□□ 2.14
TRAPPC12-210ENST00000441983 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.1
TRAPPC12-210ENST00000441983 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
TRAPPC12-210ENST00000441983 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
TRAPPC12-210ENST00000441983 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
TRAPPC12-210ENST00000441983 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
TRAPPC12-210ENST00000441983 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
TRAPPC12-210ENST00000441983 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
TRAPPC12-210ENST00000441983 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
TRAPPC12-210ENST00000441983 ATAD2BQ9ULI0 1458 aa27.85■■■□□ 2.05
TRAPPC12-210ENST00000441983 NCAPD3P42695 1498 aa27.83■■■□□ 2.04
TRAPPC12-210ENST00000441983 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
TRAPPC12-210ENST00000441983 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
TRAPPC12-210ENST00000441983 WIZO95785 1651 aa27.68■■■□□ 2.02
TRAPPC12-210ENST00000441983 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
TRAPPC12-210ENST00000441983 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
TRAPPC12-210ENST00000441983 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
TRAPPC12-210ENST00000441983 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
TRAPPC12-210ENST00000441983 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
TRAPPC12-210ENST00000441983 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
TRAPPC12-210ENST00000441983 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
TRAPPC12-210ENST00000441983 CFTRP13569 1480 aa26.94■■□□□ 1.9
TRAPPC12-210ENST00000441983 NESP48681 1621 aa26.91■■□□□ 1.9
TRAPPC12-210ENST00000441983 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
TRAPPC12-210ENST00000441983 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
TRAPPC12-210ENST00000441983 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
TRAPPC12-210ENST00000441983 FANCD2Q9BXW9 1451 aa26.68■■□□□ 1.86
TRAPPC12-210ENST00000441983 CEP164Q9UPV0 1460 aa26.65■■□□□ 1.86
TRAPPC12-210ENST00000441983 THOC2Q8NI27 1593 aaKnown RBP26.62■■□□□ 1.85
TRAPPC12-210ENST00000441983 MRC2Q9UBG0 1479 aa26.54■■□□□ 1.84
TRAPPC12-210ENST00000441983 WDR62O43379 1518 aa26.49■■□□□ 1.83
TRAPPC12-210ENST00000441983 CUX2O14529 1486 aa26.46■■□□□ 1.83
TRAPPC12-210ENST00000441983 ABCC8Q09428 1581 aa26.43■■□□□ 1.82
TRAPPC12-210ENST00000441983 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
TRAPPC12-210ENST00000441983 URB2Q14146 1524 aaKnown RBP26.37■■□□□ 1.81
TRAPPC12-210ENST00000441983 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
TRAPPC12-210ENST00000441983 CUX1P39880 1505 aa26.21■■□□□ 1.79
TRAPPC12-210ENST00000441983 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
TRAPPC12-210ENST00000441983 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
TRAPPC12-210ENST00000441983 TOP2BQ02880 1626 aa26.17■■□□□ 1.78
TRAPPC12-210ENST00000441983 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
TRAPPC12-210ENST00000441983 POLA1P09884 1462 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC12-210ENST00000441983 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
TRAPPC12-210ENST00000441983 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
TRAPPC12-210ENST00000441983 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
TRAPPC12-210ENST00000441983 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
TRAPPC12-210ENST00000441983 SOGA1O94964 1423 aa25.94■■□□□ 1.74
TRAPPC12-210ENST00000441983 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
TRAPPC12-210ENST00000441983 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
TRAPPC12-210ENST00000441983 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
TRAPPC12-210ENST00000441983 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
TRAPPC12-210ENST00000441983 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
TRAPPC12-210ENST00000441983 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
TRAPPC12-210ENST00000441983 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.76e-6■■■■□ 25.1
TRAPPC12-210ENST00000441983 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
TRAPPC12-210ENST00000441983 TDRD9Q8NDG6 1382 aaKnown RBP25.68■■□□□ 1.7
TRAPPC12-210ENST00000441983 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
TRAPPC12-210ENST00000441983 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
TRAPPC12-210ENST00000441983 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
TRAPPC12-210ENST00000441983 MAGI1Q96QZ7 1491 aaPredicted RBP25.63■■□□□ 1.69
TRAPPC12-210ENST00000441983 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
TRAPPC12-210ENST00000441983 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
TRAPPC12-210ENST00000441983 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
TRAPPC12-210ENST00000441983 CUL7Q14999 1698 aa25.52■■□□□ 1.68
TRAPPC12-210ENST00000441983 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
TRAPPC12-210ENST00000441983 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
TRAPPC12-210ENST00000441983 CHD1O14646 1710 aa25.48■■□□□ 1.67
TRAPPC12-210ENST00000441983 EEA1Q15075 1411 aa25.45■■□□□ 1.66
TRAPPC12-210ENST00000441983 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
TRAPPC12-210ENST00000441983 IGF1RP08069 1367 aa25.39■■□□□ 1.65
TRAPPC12-210ENST00000441983 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
TRAPPC12-210ENST00000441983 RUSC2Q8N2Y8 1516 aa25.34■■□□□ 1.65
TRAPPC12-210ENST00000441983 CHMP7Q8WUX9 453 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC12-210ENST00000441983 CARMIL1Q5VZK9 1371 aa25.27■■□□□ 1.64
TRAPPC12-210ENST00000441983 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
TRAPPC12-210ENST00000441983 NUP160Q12769 1436 aa25.23■■□□□ 1.63
TRAPPC12-210ENST00000441983 FBLN2P98095 1184 aa25.23■■□□□ 1.63
TRAPPC12-210ENST00000441983 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
TRAPPC12-210ENST00000441983 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
TRAPPC12-210ENST00000441983 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
TRAPPC12-210ENST00000441983 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
TRAPPC12-210ENST00000441983 CSRNP3Q8WYN3 585 aa25.16■■□□□ 1.62
TRAPPC12-210ENST00000441983 KIF21BO75037 1637 aa25.15■■□□□ 1.62
TRAPPC12-210ENST00000441983 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
TRAPPC12-210ENST00000441983 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
TRAPPC12-210ENST00000441983 KIAA0586Q9BVV6 1533 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms