RNA–Protein interactions for RNA: ENST00000412591.5

COPS7B-208, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-208ENST00000412591 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
COPS7B-208ENST00000412591 CCDC180Q9P1Z9 1646 aa35.35■■■■□ 3.25
COPS7B-208ENST00000412591 ABCC9O60706 1549 aa34.66■■■■□ 3.14
COPS7B-208ENST00000412591 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
COPS7B-208ENST00000412591 NACADO15069 1562 aa33.24■■■□□ 2.91
COPS7B-208ENST00000412591 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
COPS7B-208ENST00000412591 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
COPS7B-208ENST00000412591 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
COPS7B-208ENST00000412591 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
COPS7B-208ENST00000412591 UNC13AQ9UPW8 1703 aa32.59■■■□□ 2.81
COPS7B-208ENST00000412591 PABPN1Q86U42 306 aaKnown RBP eCLIP32.37■■■□□ 2.77
COPS7B-208ENST00000412591 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.77
COPS7B-208ENST00000412591 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
COPS7B-208ENST00000412591 SHROOM4Q9ULL8 1493 aa31.95■■■□□ 2.7
COPS7B-208ENST00000412591 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
COPS7B-208ENST00000412591 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
COPS7B-208ENST00000412591 CC2D2AQ9P2K1 1620 aa31.36■■■□□ 2.61
COPS7B-208ENST00000412591 CECR2Q9BXF3 1484 aa31.15■■■□□ 2.58
COPS7B-208ENST00000412591 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
COPS7B-208ENST00000412591 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
COPS7B-208ENST00000412591 ATAD2BQ9ULI0 1458 aa30.69■■■□□ 2.5
COPS7B-208ENST00000412591 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
COPS7B-208ENST00000412591 SMARCA2P51531 1590 aa30.64■■■□□ 2.5
COPS7B-208ENST00000412591 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
COPS7B-208ENST00000412591 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
COPS7B-208ENST00000412591 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
COPS7B-208ENST00000412591 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
COPS7B-208ENST00000412591 WIZO95785 1651 aa30.29■■■□□ 2.44
COPS7B-208ENST00000412591 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
COPS7B-208ENST00000412591 NESP48681 1621 aa29.99■■■□□ 2.39
COPS7B-208ENST00000412591 TOP2AP11388 1531 aaKnown RBP29.95■■■□□ 2.38
COPS7B-208ENST00000412591 LAMC3Q9Y6N6 1575 aa29.89■■■□□ 2.38
COPS7B-208ENST00000412591 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
COPS7B-208ENST00000412591 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
COPS7B-208ENST00000412591 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
COPS7B-208ENST00000412591 KIF21AQ7Z4S6 1674 aa29.64■■■□□ 2.34
COPS7B-208ENST00000412591 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
COPS7B-208ENST00000412591 CUX2O14529 1486 aa29.59■■■□□ 2.33
COPS7B-208ENST00000412591 CFTRP13569 1480 aa29.59■■■□□ 2.33
COPS7B-208ENST00000412591 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
COPS7B-208ENST00000412591 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
COPS7B-208ENST00000412591 CEP164Q9UPV0 1460 aa29.41■■■□□ 2.3
COPS7B-208ENST00000412591 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
COPS7B-208ENST00000412591 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
COPS7B-208ENST00000412591 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
COPS7B-208ENST00000412591 WDR62O43379 1518 aa29.31■■■□□ 2.28
COPS7B-208ENST00000412591 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
COPS7B-208ENST00000412591 TOPBP1Q92547 1522 aa28.97■■■□□ 2.23
COPS7B-208ENST00000412591 ABCC8Q09428 1581 aa28.93■■■□□ 2.22
COPS7B-208ENST00000412591 DNMBPQ6XZF7 1577 aa28.93■■■□□ 2.22
COPS7B-208ENST00000412591 IFT140Q96RY7 1462 aa28.78■■■□□ 2.2
COPS7B-208ENST00000412591 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
COPS7B-208ENST00000412591 CUX1P39880 1505 aa28.73■■■□□ 2.19
COPS7B-208ENST00000412591 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
COPS7B-208ENST00000412591 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
COPS7B-208ENST00000412591 TARBP1Q13395 1621 aaKnown RBP28.67■■■□□ 2.18
COPS7B-208ENST00000412591 FGD5Q6ZNL6 1462 aa28.64■■■□□ 2.17
COPS7B-208ENST00000412591 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
COPS7B-208ENST00000412591 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
COPS7B-208ENST00000412591 SOGA1O94964 1423 aa28.58■■■□□ 2.17
COPS7B-208ENST00000412591 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.152e-6■■■■■ 29.8
COPS7B-208ENST00000412591 WRNQ14191 1432 aaPredicted RBP eCLIP28.5■■■□□ 2.15
COPS7B-208ENST00000412591 TOP2BQ02880 1626 aa28.46■■■□□ 2.15
COPS7B-208ENST00000412591 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
COPS7B-208ENST00000412591 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
COPS7B-208ENST00000412591 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
COPS7B-208ENST00000412591 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
COPS7B-208ENST00000412591 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
COPS7B-208ENST00000412591 OSCARQ8IYS5 282 aa28.33■■■□□ 2.13
COPS7B-208ENST00000412591 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
COPS7B-208ENST00000412591 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
COPS7B-208ENST00000412591 GAPVD1Q14C86 1478 aa28.26■■■□□ 2.11
COPS7B-208ENST00000412591 CHD1O14646 1710 aa28.24■■■□□ 2.11
COPS7B-208ENST00000412591 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
COPS7B-208ENST00000412591 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
COPS7B-208ENST00000412591 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
COPS7B-208ENST00000412591 FBLN2P98095 1184 aa28.16■■■□□ 2.1
COPS7B-208ENST00000412591 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
COPS7B-208ENST00000412591 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
COPS7B-208ENST00000412591 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
COPS7B-208ENST00000412591 ADAMTS12P58397 1594 aa28■■■□□ 2.07
COPS7B-208ENST00000412591 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
COPS7B-208ENST00000412591 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
COPS7B-208ENST00000412591 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
COPS7B-208ENST00000412591 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
COPS7B-208ENST00000412591 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
COPS7B-208ENST00000412591 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
COPS7B-208ENST00000412591 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
COPS7B-208ENST00000412591 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
COPS7B-208ENST00000412591 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
COPS7B-208ENST00000412591 IGF1RP08069 1367 aa27.8■■■□□ 2.04
COPS7B-208ENST00000412591 CEP170Q5SW79 1584 aa27.79■■■□□ 2.04
COPS7B-208ENST00000412591 NUP160Q12769 1436 aa27.78■■■□□ 2.04
COPS7B-208ENST00000412591 CUL7Q14999 1698 aa27.75■■■□□ 2.03
COPS7B-208ENST00000412591 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
COPS7B-208ENST00000412591 RUSC2Q8N2Y8 1516 aa27.65■■■□□ 2.02
COPS7B-208ENST00000412591 CYB5RLQ6IPT4 315 aa27.63■■■□□ 2.01
COPS7B-208ENST00000412591 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
COPS7B-208ENST00000412591 SHROOM2Q13796 1616 aa27.6■■■□□ 2.01
COPS7B-208ENST00000412591 ERCC6L2Q5T890 1561 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms