Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.952e-6■■■■□ 24.7
XRN2Q9H0D6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.7■□□□□ 0.92e-6■■■■□ 24.7
XRN2Q9H0D6 UBE2E1-211ENST00000495141 582 ntTSL 218.63■□□□□ 0.572e-6■■■■□ 24.7
XRN2Q9H0D6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.333e-7■■■■□ 24.7
XRN2Q9H0D6 ANKRD11-211ENST00000566973 442 ntTSL 225.21■■□□□ 1.636e-7■■■■□ 24.7
XRN2Q9H0D6 ANKRD11-215ENST00000568512 294 ntTSL 29.72□□□□□ -0.857e-7■■■■□ 24.7
XRN2Q9H0D6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.482e-7■■■■□ 24.7
XRN2Q9H0D6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-7■■■■□ 24.7
XRN2Q9H0D6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.6□□□□□ -0.072e-7■■■■□ 24.7
XRN2Q9H0D6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.656e-7■■■■□ 24.7
XRN2Q9H0D6 PIP4K2B-202ENST00000617499 547 ntTSL 421.92■■□□□ 1.16e-7■■■■□ 24.7
XRN2Q9H0D6 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.52e-6■■■■□ 24.7
XRN2Q9H0D6 CPZ-205ENST00000506287 906 ntTSL 325.75■■□□□ 1.717e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-207ENST00000514602 692 ntTSL 225.21■■□□□ 1.637e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-204ENST00000504070 583 ntTSL 422.88■■□□□ 1.257e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.87e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-208ENST00000514875 597 ntTSL 320.04■□□□□ 0.87e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.777e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-209ENST00000515606 2464 ntTSL 1 (best)18.2■□□□□ 0.57e-7■■■■□ 24.7
XRN2Q9H0D6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.44■□□□□ 0.387e-7■■■■□ 24.7
XRN2Q9H0D6 GPR78-207ENST00000514302 4944 ntTSL 214.1□□□□□ -0.157e-7■■■■□ 24.7
XRN2Q9H0D6 MGEA5-208ENST00000479811 695 ntTSL 513.23□□□□□ -0.292e-6■■■■□ 24.7
XRN2Q9H0D6 MGEA5-209ENST00000482611 1664 ntTSL 1 (best)6.14□□□□□ -1.432e-6■■■■□ 24.7
XRN2Q9H0D6 MGEA5-210ENST00000492204 519 ntTSL 25.79□□□□□ -1.482e-6■■■■□ 24.7
XRN2Q9H0D6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.414e-7■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-218ENST00000484375 785 ntTSL 325.92■■□□□ 1.746e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-204ENST00000418347 563 ntTSL 425.26■■□□□ 1.636e-6■■■■□ 24.6
XRN2Q9H0D6 NIP7-205ENST00000563364 436 ntTSL 225.11■■□□□ 1.614e-6■■■■□ 24.6
XRN2Q9H0D6 GLUL-210ENST00000484996 1369 ntTSL 323.78■■□□□ 1.41e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-219ENST00000484600 582 ntTSL 223.55■■□□□ 1.366e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-212ENST00000455009 580 ntTSL 323.53■■□□□ 1.366e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-213ENST00000458033 561 ntTSL 223.22■■□□□ 1.316e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-203ENST00000417330 559 ntTSL 223.17■■□□□ 1.36e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-205ENST00000427217 545 ntTSL 323.17■■□□□ 1.36e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-206ENST00000429246 348 ntTSL 523.17■■□□□ 1.36e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-207ENST00000431816 581 ntTSL 223.17■■□□□ 1.36e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.886e-6■■■■□ 24.6
XRN2Q9H0D6 QRICH2-204ENST00000532549 839 ntAPPRIS ALT2 TSL 520.23■□□□□ 0.834e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-202ENST00000414376 572 ntTSL 419.79■□□□□ 0.766e-6■■■■□ 24.6
XRN2Q9H0D6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.38■□□□□ 0.696e-6■■■■□ 24.6
XRN2Q9H0D6 FKBP4-206ENST00000543769 425 ntTSL 518.79■□□□□ 0.66e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-209ENST00000443222 669 ntTSL 218.49■□□□□ 0.556e-6■■■■□ 24.6
XRN2Q9H0D6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.536e-6■■■■□ 24.6
XRN2Q9H0D6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.521e-6■■■■□ 24.6
XRN2Q9H0D6 QRICH2-202ENST00000447564 1500 ntAPPRIS ALT2 TSL 518.11■□□□□ 0.494e-6■■■■□ 24.6
XRN2Q9H0D6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.58■□□□□ 0.44e-6■■■■□ 24.6
XRN2Q9H0D6 AC004922.1-202ENST00000441989 1702 ntTSL 217.09■□□□□ 0.336e-6■■■■□ 24.6
XRN2Q9H0D6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.294e-6■■■■□ 24.6
XRN2Q9H0D6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-6■■■■□ 24.6
XRN2Q9H0D6 NIP7-206ENST00000565034 639 ntTSL 315.67■□□□□ 0.14e-6■■■■□ 24.6
XRN2Q9H0D6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.046e-6■■■■□ 24.6
XRN2Q9H0D6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -01e-6■■■■□ 24.6
XRN2Q9H0D6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.036e-6■■■■□ 24.6
XRN2Q9H0D6 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.066e-6■■■■□ 24.6
XRN2Q9H0D6 QRICH2-203ENST00000524722 2253 ntTSL 1 (best)14.31□□□□□ -0.124e-6■■■■□ 24.6
XRN2Q9H0D6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.131e-6■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC13.76□□□□□ -0.212e-14■■■■□ 24.6
XRN2Q9H0D6 SLC3A2-205ENST00000457660 873 ntTSL 513.66□□□□□ -0.228e-27■■■■□ 24.6
XRN2Q9H0D6 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.254e-6■■■■□ 24.6
XRN2Q9H0D6 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.331e-6■■■■□ 24.6
XRN2Q9H0D6 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.341e-6■■■■□ 24.6
XRN2Q9H0D6 SLC3A2-217ENST00000541425 595 ntTSL 512.67□□□□□ -0.388e-27■■■■□ 24.6
XRN2Q9H0D6 GLUL-211ENST00000489818 683 ntTSL 312.46□□□□□ -0.411e-6■■■■□ 24.6
XRN2Q9H0D6 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.454e-6■■■■□ 24.6
XRN2Q9H0D6 GLUL-207ENST00000463851 939 ntTSL 311.56□□□□□ -0.561e-6■■■■□ 24.6
XRN2Q9H0D6 NIP7-203ENST00000562131 572 ntTSL 411.45□□□□□ -0.584e-6■■■■□ 24.6
XRN2Q9H0D6 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.586e-6■■■■□ 24.6
XRN2Q9H0D6 SLC3A2-209ENST00000537508 583 ntTSL 211.2□□□□□ -0.628e-27■■■■□ 24.6
XRN2Q9H0D6 GLUL-206ENST00000462444 793 ntTSL 211.02□□□□□ -0.651e-6■■■■□ 24.6
XRN2Q9H0D6 SLC3A2-207ENST00000535768 597 ntTSL 510.99□□□□□ -0.658e-27■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-201ENST00000394053 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.662e-14■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-205ENST00000470592 1396 ntTSL 210.31□□□□□ -0.762e-14■■■■□ 24.6
XRN2Q9H0D6 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC10.23□□□□□ -0.774e-6■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC10.12□□□□□ -0.792e-14■■■■□ 24.6
XRN2Q9H0D6 SLC3A2-223ENST00000546312 564 ntTSL 210.11□□□□□ -0.798e-27■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-208ENST00000489041 1135 ntTSL 210.07□□□□□ -0.82e-14■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-207ENST00000488086 483 ntTSL 210□□□□□ -0.812e-14■■■■□ 24.6
XRN2Q9H0D6 GLUL-209ENST00000480604 908 ntTSL 59.26□□□□□ -0.931e-6■■■■□ 24.6
XRN2Q9H0D6 MTHFD2-206ENST00000477455 696 ntTSL 37.99□□□□□ -1.132e-14■■■■□ 24.6
XRN2Q9H0D6 FAM207A-203ENST00000458015 643 ntTSL 523.64■■□□□ 1.374e-6■■■■□ 24.6
XRN2Q9H0D6 RSF1-202ENST00000440064 604 ntTSL 524.66■■□□□ 1.542e-7■■■■□ 24.6
XRN2Q9H0D6 RSF1-208ENST00000530604 520 ntTSL 221.38■■□□□ 1.012e-7■■■■□ 24.6
XRN2Q9H0D6 RSF1-206ENST00000528095 2107 ntTSL 1 (best)20.33■□□□□ 0.842e-7■■■■□ 24.6
XRN2Q9H0D6 RSF1-203ENST00000467567 2982 ntTSL 214.31□□□□□ -0.122e-7■■■■□ 24.6
XRN2Q9H0D6 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.192e-7■■■■□ 24.6
XRN2Q9H0D6 SS18L1-203ENST00000450482 781 ntTSL 514.23□□□□□ -0.135e-8■■■■□ 24.6
XRN2Q9H0D6 FNDC3B-207ENST00000469491 2916 ntTSL 217.62■□□□□ 0.413e-8■■■■□ 24.6
XRN2Q9H0D6 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.513e-8■■■■□ 24.6
XRN2Q9H0D6 WDR6-214ENST00000488572 610 ntTSL 424.7■■□□□ 1.545e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-213ENST00000473238 568 ntTSL 322.28■■□□□ 1.165e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-206ENST00000438660 852 ntTSL 521.8■■□□□ 1.085e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.44■■□□□ 1.025e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-205ENST00000429900 563 ntTSL 520.37■□□□□ 0.855e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-212ENST00000472878 556 ntTSL 519.97■□□□□ 0.795e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-216ENST00000489684 1155 ntTSL 219.06■□□□□ 0.645e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-209ENST00000461687 555 ntTSL 418.42■□□□□ 0.545e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-210ENST00000462064 589 ntTSL 517.34■□□□□ 0.375e-10■■■■□ 24.6
XRN2Q9H0D6 WDR6-203ENST00000419837 538 ntTSL 413.2□□□□□ -0.35e-10■■■■□ 24.6
XRN2Q9H0D6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 13e-6■■■■□ 24.5
XRN2Q9H0D6 MMP17-210ENST00000545671 775 ntTSL 328.7■■■□□ 2.189e-9■■■■□ 24.5
Retrieved 100 of 21,068 protein–RNA pairs in 207.2 ms