RNA–Protein interactions for RNA: ENST00000484600.6

ARPC1B-219, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-219ENST00000484600 NISCHQ9Y2I1 1504 aa48.82■■■■■ 5.41
ARPC1B-219ENST00000484600 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
ARPC1B-219ENST00000484600 ABCC9O60706 1549 aa42.4■■■■■ 4.38
ARPC1B-219ENST00000484600 RB1CC1Q8TDY2 1594 aa40.91■■■■■ 4.14
ARPC1B-219ENST00000484600 NACADO15069 1562 aa40.86■■■■■ 4.13
ARPC1B-219ENST00000484600 DCAF8L2P0C7V8 631 aa40.85■■■■■ 4.13
ARPC1B-219ENST00000484600 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
ARPC1B-219ENST00000484600 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
ARPC1B-219ENST00000484600 DCAF1Q9Y4B6 1507 aa40.44■■■■■ 4.06
ARPC1B-219ENST00000484600 UNC13AQ9UPW8 1703 aa39.88■■■■□ 3.98
ARPC1B-219ENST00000484600 PABPN1Q86U42 306 aaKnown RBP eCLIP39.61■■■■□ 3.93
ARPC1B-219ENST00000484600 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
ARPC1B-219ENST00000484600 BICRAQ9NZM4 1560 aa39.51■■■■□ 3.92
ARPC1B-219ENST00000484600 SHROOM4Q9ULL8 1493 aa39.28■■■■□ 3.88
ARPC1B-219ENST00000484600 DNAJC5BQ9UF47 199 aa38.76■■■■□ 3.8
ARPC1B-219ENST00000484600 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
ARPC1B-219ENST00000484600 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
ARPC1B-219ENST00000484600 CECR2Q9BXF3 1484 aa38.13■■■■□ 3.69
ARPC1B-219ENST00000484600 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
ARPC1B-219ENST00000484600 SMARCA4P51532 1647 aa37.88■■■■□ 3.65
ARPC1B-219ENST00000484600 SMARCA2P51531 1590 aa37.7■■■■□ 3.63
ARPC1B-219ENST00000484600 NCAPD3P42695 1498 aa37.64■■■■□ 3.62
ARPC1B-219ENST00000484600 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
ARPC1B-219ENST00000484600 MROH2BQ7Z745 1585 aa37.57■■■■□ 3.6
ARPC1B-219ENST00000484600 PEG3Q9GZU2 1588 aa37.51■■■■□ 3.6
ARPC1B-219ENST00000484600 HMGXB3Q12766 1538 aa37.49■■■■□ 3.59
ARPC1B-219ENST00000484600 BAZ1BQ9UIG0 1483 aaKnown RBP37.4■■■■□ 3.58
ARPC1B-219ENST00000484600 WIZO95785 1651 aa37.2■■■■□ 3.55
ARPC1B-219ENST00000484600 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
ARPC1B-219ENST00000484600 TOP2AP11388 1531 aaKnown RBP36.85■■■■□ 3.49
ARPC1B-219ENST00000484600 LAMC3Q9Y6N6 1575 aa36.7■■■■□ 3.47
ARPC1B-219ENST00000484600 ERCC6Q03468 1493 aa36.65■■■■□ 3.46
ARPC1B-219ENST00000484600 NESP48681 1621 aa36.65■■■■□ 3.46
ARPC1B-219ENST00000484600 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
ARPC1B-219ENST00000484600 PDS5BQ9NTI5 1447 aa36.48■■■■□ 3.43
ARPC1B-219ENST00000484600 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
ARPC1B-219ENST00000484600 CFTRP13569 1480 aa36.33■■■■□ 3.41
ARPC1B-219ENST00000484600 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
ARPC1B-219ENST00000484600 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
ARPC1B-219ENST00000484600 CUX2O14529 1486 aa36.23■■■■□ 3.39
ARPC1B-219ENST00000484600 PRDM2Q13029 1718 aa36.14■■■■□ 3.38
ARPC1B-219ENST00000484600 FANCD2Q9BXW9 1451 aa36.14■■■■□ 3.38
ARPC1B-219ENST00000484600 CEP164Q9UPV0 1460 aa36.13■■■■□ 3.37
ARPC1B-219ENST00000484600 THOC2Q8NI27 1593 aaKnown RBP36.13■■■■□ 3.37
ARPC1B-219ENST00000484600 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
ARPC1B-219ENST00000484600 WDR62O43379 1518 aa35.9■■■■□ 3.34
ARPC1B-219ENST00000484600 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
ARPC1B-219ENST00000484600 ABCC8Q09428 1581 aa35.68■■■■□ 3.3
ARPC1B-219ENST00000484600 TOPBP1Q92547 1522 aa35.55■■■■□ 3.28
ARPC1B-219ENST00000484600 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
ARPC1B-219ENST00000484600 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
ARPC1B-219ENST00000484600 CUX1P39880 1505 aa35.26■■■■□ 3.23
ARPC1B-219ENST00000484600 POLA1P09884 1462 aaPredicted RBP35.24■■■■□ 3.23
ARPC1B-219ENST00000484600 FGD5Q6ZNL6 1462 aa35.17■■■■□ 3.22
ARPC1B-219ENST00000484600 SOGA1O94964 1423 aa35.15■■■■□ 3.22
ARPC1B-219ENST00000484600 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
ARPC1B-219ENST00000484600 WRNQ14191 1432 aaPredicted RBP eCLIP35.12■■■■□ 3.21
ARPC1B-219ENST00000484600 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
ARPC1B-219ENST00000484600 RAD54L2Q9Y4B4 1467 aa35.05■■■■□ 3.2
ARPC1B-219ENST00000484600 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
ARPC1B-219ENST00000484600 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
ARPC1B-219ENST00000484600 EIF4G3O43432 1585 aaKnown RBP35.02■■■■□ 3.2
ARPC1B-219ENST00000484600 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
ARPC1B-219ENST00000484600 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
ARPC1B-219ENST00000484600 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
ARPC1B-219ENST00000484600 AQRO60306 1485 aaKnown RBP eCLIP34.94■■■■□ 3.182e-6■■■■■ 27
ARPC1B-219ENST00000484600 TDRD9Q8NDG6 1382 aaKnown RBP34.89■■■■□ 3.18
ARPC1B-219ENST00000484600 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
ARPC1B-219ENST00000484600 OSCARQ8IYS5 282 aa34.76■■■■□ 3.16
ARPC1B-219ENST00000484600 GRIN2BQ13224 1484 aa34.74■■■■□ 3.15
ARPC1B-219ENST00000484600 GAPVD1Q14C86 1478 aa34.74■■■■□ 3.15
ARPC1B-219ENST00000484600 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
ARPC1B-219ENST00000484600 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
ARPC1B-219ENST00000484600 MAGI1Q96QZ7 1491 aaPredicted RBP34.66■■■■□ 3.14
ARPC1B-219ENST00000484600 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
ARPC1B-219ENST00000484600 FBLN2P98095 1184 aa34.62■■■■□ 3.13
ARPC1B-219ENST00000484600 CHD1O14646 1710 aa34.59■■■■□ 3.13
ARPC1B-219ENST00000484600 CHMP7Q8WUX9 453 aaPredicted RBP34.54■■■■□ 3.12
ARPC1B-219ENST00000484600 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
ARPC1B-219ENST00000484600 ERICH3Q5RHP9 1530 aa34.47■■■■□ 3.11
ARPC1B-219ENST00000484600 KIF27Q86VH2 1401 aa34.43■■■■□ 3.1
ARPC1B-219ENST00000484600 TRIM41Q8WV44 630 aa34.38■■■■□ 3.09
ARPC1B-219ENST00000484600 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
ARPC1B-219ENST00000484600 FHAD1B1AJZ9 1412 aa34.36■■■■□ 3.09
ARPC1B-219ENST00000484600 GRIN2AQ12879 1464 aa34.27■■■■□ 3.08
ARPC1B-219ENST00000484600 CUL7Q14999 1698 aa34.2■■■■□ 3.07
ARPC1B-219ENST00000484600 IGF1RP08069 1367 aa34.19■■■■□ 3.06
ARPC1B-219ENST00000484600 CLASP1Q7Z460 1538 aa34.18■■■■□ 3.06
ARPC1B-219ENST00000484600 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
ARPC1B-219ENST00000484600 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
ARPC1B-219ENST00000484600 RIMBP3Q9UFD9 1639 aa34.12■■■■□ 3.05
ARPC1B-219ENST00000484600 ARHGEF11O15085 1522 aa34.11■■■■□ 3.05
ARPC1B-219ENST00000484600 NUP160Q12769 1436 aa34.09■■■■□ 3.05
ARPC1B-219ENST00000484600 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
ARPC1B-219ENST00000484600 CEP170Q5SW79 1584 aa34.05■■■■□ 3.04
ARPC1B-219ENST00000484600 RUSC2Q8N2Y8 1516 aa33.96■■■■□ 3.03
ARPC1B-219ENST00000484600 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
ARPC1B-219ENST00000484600 RAPGEF2Q9Y4G8 1499 aa33.86■■■■□ 3.01
ARPC1B-219ENST00000484600 SHROOM2Q13796 1616 aa33.83■■■■□ 3.01
ARPC1B-219ENST00000484600 EEA1Q15075 1411 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms