RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-223ENST00000546312 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
SLC3A2-223ENST00000546312 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
SLC3A2-223ENST00000546312 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
SLC3A2-223ENST00000546312 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
SLC3A2-223ENST00000546312 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
SLC3A2-223ENST00000546312 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
SLC3A2-223ENST00000546312 ABCC9O60706 1549 aa18.04■□□□□ 0.48
SLC3A2-223ENST00000546312 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
SLC3A2-223ENST00000546312 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
SLC3A2-223ENST00000546312 NACADO15069 1562 aa17.51■□□□□ 0.39
SLC3A2-223ENST00000546312 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
SLC3A2-223ENST00000546312 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
SLC3A2-223ENST00000546312 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
SLC3A2-223ENST00000546312 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
SLC3A2-223ENST00000546312 FOXD1Q16676 465 aa17.34■□□□□ 0.37
SLC3A2-223ENST00000546312 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
SLC3A2-223ENST00000546312 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
SLC3A2-223ENST00000546312 ADRA2BP18089 450 aa16.94■□□□□ 0.3
SLC3A2-223ENST00000546312 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
SLC3A2-223ENST00000546312 BICRAQ9NZM4 1560 aa16.89■□□□□ 0.29
SLC3A2-223ENST00000546312 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
SLC3A2-223ENST00000546312 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
SLC3A2-223ENST00000546312 PIAS4Q8N2W9 510 aaPredicted RBP16.52■□□□□ 0.24
SLC3A2-223ENST00000546312 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
SLC3A2-223ENST00000546312 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
SLC3A2-223ENST00000546312 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
SLC3A2-223ENST00000546312 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
SLC3A2-223ENST00000546312 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
SLC3A2-223ENST00000546312 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
SLC3A2-223ENST00000546312 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
SLC3A2-223ENST00000546312 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
SLC3A2-223ENST00000546312 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
SLC3A2-223ENST00000546312 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
SLC3A2-223ENST00000546312 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
SLC3A2-223ENST00000546312 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
SLC3A2-223ENST00000546312 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
SLC3A2-223ENST00000546312 WIZO95785 1651 aa16.02■□□□□ 0.16
SLC3A2-223ENST00000546312 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
SLC3A2-223ENST00000546312 MSH5O43196 834 aa15.95■□□□□ 0.14
SLC3A2-223ENST00000546312 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
SLC3A2-223ENST00000546312 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
SLC3A2-223ENST00000546312 SUPT5HO00267 1087 aaKnown RBP15.78■□□□□ 0.12
SLC3A2-223ENST00000546312 KCNA4P22459 653 aa15.78■□□□□ 0.12
SLC3A2-223ENST00000546312 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
SLC3A2-223ENST00000546312 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
SLC3A2-223ENST00000546312 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
SLC3A2-223ENST00000546312 NESP48681 1621 aa15.64■□□□□ 0.09
SLC3A2-223ENST00000546312 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
SLC3A2-223ENST00000546312 CFTRP13569 1480 aa15.59■□□□□ 0.09
SLC3A2-223ENST00000546312 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
SLC3A2-223ENST00000546312 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
SLC3A2-223ENST00000546312 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
SLC3A2-223ENST00000546312 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
SLC3A2-223ENST00000546312 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
SLC3A2-223ENST00000546312 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
SLC3A2-223ENST00000546312 CEP164Q9UPV0 1460 aa15.44■□□□□ 0.06
SLC3A2-223ENST00000546312 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
SLC3A2-223ENST00000546312 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
SLC3A2-223ENST00000546312 CUX2O14529 1486 aa15.38■□□□□ 0.05
SLC3A2-223ENST00000546312 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
SLC3A2-223ENST00000546312 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
SLC3A2-223ENST00000546312 WDR62O43379 1518 aa15.32■□□□□ 0.04
SLC3A2-223ENST00000546312 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.04
SLC3A2-223ENST00000546312 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
SLC3A2-223ENST00000546312 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
SLC3A2-223ENST00000546312 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
SLC3A2-223ENST00000546312 TOPBP1Q92547 1522 aa15.23■□□□□ 0.03
SLC3A2-223ENST00000546312 CUX1P39880 1505 aa15.15■□□□□ 0.02
SLC3A2-223ENST00000546312 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
SLC3A2-223ENST00000546312 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
SLC3A2-223ENST00000546312 IFT140Q96RY7 1462 aa15.13■□□□□ 0.01
SLC3A2-223ENST00000546312 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
SLC3A2-223ENST00000546312 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
SLC3A2-223ENST00000546312 SOGA1O94964 1423 aa15.1■□□□□ 0.01
SLC3A2-223ENST00000546312 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
SLC3A2-223ENST00000546312 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
SLC3A2-223ENST00000546312 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
SLC3A2-223ENST00000546312 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
SLC3A2-223ENST00000546312 SYNJ1O43426 1573 aa15.05■□□□□ -0
SLC3A2-223ENST00000546312 RAD54L2Q9Y4B4 1467 aa15.02■□□□□ -0
SLC3A2-223ENST00000546312 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
SLC3A2-223ENST00000546312 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
SLC3A2-223ENST00000546312 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
SLC3A2-223ENST00000546312 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
SLC3A2-223ENST00000546312 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
SLC3A2-223ENST00000546312 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.027e-11■■■■■ 31.5
SLC3A2-223ENST00000546312 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
SLC3A2-223ENST00000546312 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
SLC3A2-223ENST00000546312 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SLC3A2-223ENST00000546312 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
SLC3A2-223ENST00000546312 GRIN2BQ13224 1484 aa14.89□□□□□ -0.03
SLC3A2-223ENST00000546312 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
SLC3A2-223ENST00000546312 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
SLC3A2-223ENST00000546312 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
SLC3A2-223ENST00000546312 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
SLC3A2-223ENST00000546312 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
SLC3A2-223ENST00000546312 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
SLC3A2-223ENST00000546312 FBLN2P98095 1184 aa14.81□□□□□ -0.04
SLC3A2-223ENST00000546312 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
SLC3A2-223ENST00000546312 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms