RNA–Protein interactions for RNA: ENST00000418347.6

ARPC1B-204, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 4

Gene ARPC1B, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-204ENST00000418347 NISCHQ9Y2I1 1504 aa52.97■■■■■ 6.07
ARPC1B-204ENST00000418347 CCDC180Q9P1Z9 1646 aa46.77■■■■■ 5.08
ARPC1B-204ENST00000418347 ABCC9O60706 1549 aa45.12■■■■■ 4.81
ARPC1B-204ENST00000418347 ZCCHC6Q5VYS8 1495 aaKnown RBP44.29■■■■■ 4.68
ARPC1B-204ENST00000418347 DCAF8L2P0C7V8 631 aa44.02■■■■■ 4.64
ARPC1B-204ENST00000418347 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
ARPC1B-204ENST00000418347 NACADO15069 1562 aa43.79■■■■■ 4.6
ARPC1B-204ENST00000418347 MYO15BQ96JP2 1530 aa43.72■■■■■ 4.59
ARPC1B-204ENST00000418347 RB1CC1Q8TDY2 1594 aa43.68■■■■■ 4.58
ARPC1B-204ENST00000418347 SCRIBQ14160 1630 aa42.81■■■■■ 4.44
ARPC1B-204ENST00000418347 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
ARPC1B-204ENST00000418347 SHROOM4Q9ULL8 1493 aa42.37■■■■■ 4.37
ARPC1B-204ENST00000418347 BICRAQ9NZM4 1560 aa42.35■■■■■ 4.37
ARPC1B-204ENST00000418347 PABPN1Q86U42 306 aaKnown RBP eCLIP42.29■■■■■ 4.36
ARPC1B-204ENST00000418347 CECR2Q9BXF3 1484 aa41.21■■■■■ 4.19
ARPC1B-204ENST00000418347 EIF4G1Q04637 1599 aaKnown RBP41.17■■■■■ 4.18
ARPC1B-204ENST00000418347 BAZ1AQ9NRL2 1556 aaPredicted RBP41.01■■■■■ 4.16
ARPC1B-204ENST00000418347 SMARCA4P51532 1647 aa40.97■■■■■ 4.15
ARPC1B-204ENST00000418347 MROH2BQ7Z745 1585 aa40.86■■■■■ 4.13
ARPC1B-204ENST00000418347 CC2D2AQ9P2K1 1620 aa40.82■■■■■ 4.13
ARPC1B-204ENST00000418347 DNAJC5BQ9UF47 199 aa40.71■■■■■ 4.11
ARPC1B-204ENST00000418347 RSF1Q96T23 1441 aaPredicted RBP40.65■■■■■ 4.1
ARPC1B-204ENST00000418347 ATAD2BQ9ULI0 1458 aa40.54■■■■■ 4.08
ARPC1B-204ENST00000418347 SMARCA2P51531 1590 aa40.52■■■■■ 4.08
ARPC1B-204ENST00000418347 PEG3Q9GZU2 1588 aa40.52■■■■■ 4.08
ARPC1B-204ENST00000418347 WIZO95785 1651 aa40.48■■■■■ 4.07
ARPC1B-204ENST00000418347 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
ARPC1B-204ENST00000418347 BAZ1BQ9UIG0 1483 aaKnown RBP40.27■■■■■ 4.04
ARPC1B-204ENST00000418347 HMGXB3Q12766 1538 aa40.26■■■■■ 4.04
ARPC1B-204ENST00000418347 SUPT5HO00267 1087 aaKnown RBP40.22■■■■■ 4.03
ARPC1B-204ENST00000418347 TOP2AP11388 1531 aaKnown RBP40.07■■■■■ 4.01
ARPC1B-204ENST00000418347 CCDC88BA6NC98 1476 aa39.59■■■■□ 3.93
ARPC1B-204ENST00000418347 NESP48681 1621 aa39.26■■■■□ 3.88
ARPC1B-204ENST00000418347 CADPSQ9ULU8 1353 aa39.26■■■■□ 3.88
ARPC1B-204ENST00000418347 LAMC3Q9Y6N6 1575 aa39.23■■■■□ 3.87
ARPC1B-204ENST00000418347 CFTRP13569 1480 aa39.18■■■■□ 3.86
ARPC1B-204ENST00000418347 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
ARPC1B-204ENST00000418347 PDS5BQ9NTI5 1447 aa38.93■■■■□ 3.82
ARPC1B-204ENST00000418347 FANCD2Q9BXW9 1451 aa38.84■■■■□ 3.81
ARPC1B-204ENST00000418347 ERCC6Q03468 1493 aa38.83■■■■□ 3.81
ARPC1B-204ENST00000418347 KIF21AQ7Z4S6 1674 aa38.83■■■■□ 3.81
ARPC1B-204ENST00000418347 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
ARPC1B-204ENST00000418347 MRC2Q9UBG0 1479 aa38.51■■■■□ 3.76
ARPC1B-204ENST00000418347 THOC2Q8NI27 1593 aaKnown RBP38.49■■■■□ 3.75
ARPC1B-204ENST00000418347 URB2Q14146 1524 aaKnown RBP38.42■■■■□ 3.74
ARPC1B-204ENST00000418347 ABCC8Q09428 1581 aa38.41■■■■□ 3.74
ARPC1B-204ENST00000418347 WDR62O43379 1518 aa38.35■■■■□ 3.73
ARPC1B-204ENST00000418347 DNMBPQ6XZF7 1577 aa38.32■■■■□ 3.73
ARPC1B-204ENST00000418347 WRNQ14191 1432 aaPredicted RBP eCLIP38.31■■■■□ 3.72
ARPC1B-204ENST00000418347 CUX1P39880 1505 aa38.3■■■■□ 3.72
ARPC1B-204ENST00000418347 TOPBP1Q92547 1522 aa38.3■■■■□ 3.72
ARPC1B-204ENST00000418347 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
ARPC1B-204ENST00000418347 TOP2BQ02880 1626 aa38.15■■■■□ 3.7
ARPC1B-204ENST00000418347 BIVM-ERCC5R4GMW8 1640 aa38.15■■■■□ 3.7
ARPC1B-204ENST00000418347 CUX2O14529 1486 aa38.09■■■■□ 3.69
ARPC1B-204ENST00000418347 FGD5Q6ZNL6 1462 aa38.05■■■■□ 3.68
ARPC1B-204ENST00000418347 POLA1P09884 1462 aaPredicted RBP38.03■■■■□ 3.68
ARPC1B-204ENST00000418347 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
ARPC1B-204ENST00000418347 TRIM41Q8WV44 630 aa37.92■■■■□ 3.66
ARPC1B-204ENST00000418347 SOGA1O94964 1423 aa37.87■■■■□ 3.65
ARPC1B-204ENST00000418347 IFT140Q96RY7 1462 aa37.87■■■■□ 3.65
ARPC1B-204ENST00000418347 RAD54L2Q9Y4B4 1467 aa37.87■■■■□ 3.65
ARPC1B-204ENST00000418347 TARBP1Q13395 1621 aaKnown RBP37.83■■■■□ 3.65
ARPC1B-204ENST00000418347 WDR97A6NE52 1622 aa37.71■■■■□ 3.63
ARPC1B-204ENST00000418347 ABCA10Q8WWZ4 1543 aa37.68■■■■□ 3.62
ARPC1B-204ENST00000418347 ZNF608Q9ULD9 1512 aaPredicted RBP37.66■■■■□ 3.62
ARPC1B-204ENST00000418347 TDRD9Q8NDG6 1382 aaKnown RBP37.59■■■■□ 3.61
ARPC1B-204ENST00000418347 EIF4G3O43432 1585 aaKnown RBP37.56■■■■□ 3.6
ARPC1B-204ENST00000418347 AQRO60306 1485 aaKnown RBP eCLIP37.53■■■■□ 3.62e-6■■■■□ 19.5
ARPC1B-204ENST00000418347 ABCA5Q8WWZ7 1642 aa37.5■■■■□ 3.59
ARPC1B-204ENST00000418347 GAPVD1Q14C86 1478 aa37.45■■■■□ 3.59
ARPC1B-204ENST00000418347 KIF27Q86VH2 1401 aa37.45■■■■□ 3.59
ARPC1B-204ENST00000418347 RUSC2Q8N2Y8 1516 aa37.37■■■■□ 3.57
ARPC1B-204ENST00000418347 PBRM1Q86U86 1689 aa37.37■■■■□ 3.57
ARPC1B-204ENST00000418347 GRIN2BQ13224 1484 aa37.34■■■■□ 3.57
ARPC1B-204ENST00000418347 ERICH3Q5RHP9 1530 aa37.26■■■■□ 3.55
ARPC1B-204ENST00000418347 SNAPC4Q5SXM2 1469 aa37.22■■■■□ 3.55
ARPC1B-204ENST00000418347 EEA1Q15075 1411 aa37.19■■■■□ 3.54
ARPC1B-204ENST00000418347 IGF1RP08069 1367 aa37.19■■■■□ 3.54
ARPC1B-204ENST00000418347 FAM9AQ8IZU1 332 aaPredicted RBP37.18■■■■□ 3.54
ARPC1B-204ENST00000418347 MAGI1Q96QZ7 1491 aaPredicted RBP37.16■■■■□ 3.54
ARPC1B-204ENST00000418347 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
ARPC1B-204ENST00000418347 CUL7Q14999 1698 aa37.08■■■■□ 3.53
ARPC1B-204ENST00000418347 CSRNP3Q8WYN3 585 aa37.06■■■■□ 3.52
ARPC1B-204ENST00000418347 FHAD1B1AJZ9 1412 aa37.04■■■■□ 3.52
ARPC1B-204ENST00000418347 SYNJ2O15056 1496 aa37.01■■■■□ 3.52
ARPC1B-204ENST00000418347 CARMIL1Q5VZK9 1371 aa37■■■■□ 3.51
ARPC1B-204ENST00000418347 FBLN2P98095 1184 aa36.97■■■■□ 3.51
ARPC1B-204ENST00000418347 CHD1O14646 1710 aa36.96■■■■□ 3.51
ARPC1B-204ENST00000418347 CHMP7Q8WUX9 453 aaPredicted RBP36.95■■■■□ 3.51
ARPC1B-204ENST00000418347 PRXQ9BXM0 1461 aa36.91■■■■□ 3.5
ARPC1B-204ENST00000418347 GRIN2AQ12879 1464 aa36.88■■■■□ 3.49
ARPC1B-204ENST00000418347 RAPGEF2Q9Y4G8 1499 aa36.86■■■■□ 3.49
ARPC1B-204ENST00000418347 KIF21BO75037 1637 aa36.79■■■■□ 3.48
ARPC1B-204ENST00000418347 CEP170Q5SW79 1584 aa36.68■■■■□ 3.46
ARPC1B-204ENST00000418347 EHMT2Q96KQ7 1210 aa36.67■■■■□ 3.46
ARPC1B-204ENST00000418347 OSCARQ8IYS5 282 aa36.66■■■■□ 3.46
ARPC1B-204ENST00000418347 NUP160Q12769 1436 aa36.66■■■■□ 3.46
ARPC1B-204ENST00000418347 GOLGA3Q08378 1498 aa36.64■■■■□ 3.46
ARPC1B-204ENST00000418347 CLASP1Q7Z460 1538 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms