RNA–Protein interactions for RNA: ENST00000252725.9

ARPC1B-201, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARPC1B, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-201ENST00000252725 NISCHQ9Y2I1 1504 aa43.12■■■■■ 4.49
ARPC1B-201ENST00000252725 CCDC180Q9P1Z9 1646 aa38.1■■■■□ 3.69
ARPC1B-201ENST00000252725 ABCC9O60706 1549 aa36.81■■■■□ 3.48
ARPC1B-201ENST00000252725 ZCCHC6Q5VYS8 1495 aaKnown RBP36.03■■■■□ 3.36
ARPC1B-201ENST00000252725 DCAF8L2P0C7V8 631 aa35.76■■■■□ 3.32
ARPC1B-201ENST00000252725 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
ARPC1B-201ENST00000252725 NACADO15069 1562 aa35.72■■■■□ 3.31
ARPC1B-201ENST00000252725 MYO15BQ96JP2 1530 aa35.7■■■■□ 3.3
ARPC1B-201ENST00000252725 RB1CC1Q8TDY2 1594 aa35.62■■■■□ 3.29
ARPC1B-201ENST00000252725 UNC13AQ9UPW8 1703 aa34.82■■■■□ 3.16
ARPC1B-201ENST00000252725 SCRIBQ14160 1630 aa34.79■■■■□ 3.16
ARPC1B-201ENST00000252725 BICRAQ9NZM4 1560 aa34.56■■■■□ 3.12
ARPC1B-201ENST00000252725 PABPN1Q86U42 306 aaKnown RBP eCLIP34.48■■■■□ 3.11
ARPC1B-201ENST00000252725 SHROOM4Q9ULL8 1493 aa34.31■■■■□ 3.08
ARPC1B-201ENST00000252725 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
ARPC1B-201ENST00000252725 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
ARPC1B-201ENST00000252725 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
ARPC1B-201ENST00000252725 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
ARPC1B-201ENST00000252725 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
ARPC1B-201ENST00000252725 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
ARPC1B-201ENST00000252725 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
ARPC1B-201ENST00000252725 ATAD2BQ9ULI0 1458 aa33.06■■■□□ 2.88
ARPC1B-201ENST00000252725 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
ARPC1B-201ENST00000252725 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
ARPC1B-201ENST00000252725 SMARCA2P51531 1590 aa33.02■■■□□ 2.88
ARPC1B-201ENST00000252725 NCAPD3P42695 1498 aa32.97■■■□□ 2.87
ARPC1B-201ENST00000252725 WIZO95785 1651 aa32.89■■■□□ 2.86
ARPC1B-201ENST00000252725 HMGXB3Q12766 1538 aa32.84■■■□□ 2.85
ARPC1B-201ENST00000252725 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
ARPC1B-201ENST00000252725 TOP2AP11388 1531 aaKnown RBP32.58■■■□□ 2.81
ARPC1B-201ENST00000252725 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
ARPC1B-201ENST00000252725 CCDC88BA6NC98 1476 aa32.2■■■□□ 2.75
ARPC1B-201ENST00000252725 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
ARPC1B-201ENST00000252725 NESP48681 1621 aa32.01■■■□□ 2.71
ARPC1B-201ENST00000252725 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
ARPC1B-201ENST00000252725 CFTRP13569 1480 aa31.94■■■□□ 2.7
ARPC1B-201ENST00000252725 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.67
ARPC1B-201ENST00000252725 PRDM2Q13029 1718 aa31.7■■■□□ 2.67
ARPC1B-201ENST00000252725 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
ARPC1B-201ENST00000252725 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
ARPC1B-201ENST00000252725 KIF21AQ7Z4S6 1674 aa31.62■■■□□ 2.65
ARPC1B-201ENST00000252725 CEP164Q9UPV0 1460 aa31.55■■■□□ 2.64
ARPC1B-201ENST00000252725 THOC2Q8NI27 1593 aaKnown RBP31.42■■■□□ 2.62
ARPC1B-201ENST00000252725 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
ARPC1B-201ENST00000252725 URB2Q14146 1524 aaKnown RBP31.31■■■□□ 2.6
ARPC1B-201ENST00000252725 WDR62O43379 1518 aa31.3■■■□□ 2.6
ARPC1B-201ENST00000252725 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
ARPC1B-201ENST00000252725 TOPBP1Q92547 1522 aa31.2■■■□□ 2.59
ARPC1B-201ENST00000252725 DNMBPQ6XZF7 1577 aa31.2■■■□□ 2.59
ARPC1B-201ENST00000252725 CUX2O14529 1486 aa31.18■■■□□ 2.58
ARPC1B-201ENST00000252725 CUX1P39880 1505 aa31.15■■■□□ 2.58
ARPC1B-201ENST00000252725 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
ARPC1B-201ENST00000252725 SYNJ1O43426 1573 aa31.02■■■□□ 2.56
ARPC1B-201ENST00000252725 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
ARPC1B-201ENST00000252725 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
ARPC1B-201ENST00000252725 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
ARPC1B-201ENST00000252725 FGD5Q6ZNL6 1462 aa30.96■■■□□ 2.55
ARPC1B-201ENST00000252725 IFT140Q96RY7 1462 aa30.88■■■□□ 2.53
ARPC1B-201ENST00000252725 SOGA1O94964 1423 aa30.85■■■□□ 2.53
ARPC1B-201ENST00000252725 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.53
ARPC1B-201ENST00000252725 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.53
ARPC1B-201ENST00000252725 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
ARPC1B-201ENST00000252725 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
ARPC1B-201ENST00000252725 ABCA10Q8WWZ4 1543 aa30.7■■■□□ 2.51
ARPC1B-201ENST00000252725 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
ARPC1B-201ENST00000252725 WDR97A6NE52 1622 aa30.68■■■□□ 2.5
ARPC1B-201ENST00000252725 TDRD9Q8NDG6 1382 aaKnown RBP30.61■■■□□ 2.49
ARPC1B-201ENST00000252725 EIF4G3O43432 1585 aaKnown RBP30.59■■■□□ 2.49
ARPC1B-201ENST00000252725 AQRO60306 1485 aaKnown RBP eCLIP30.59■■■□□ 2.491e-6■■■■■ 32.6
ARPC1B-201ENST00000252725 ABCA5Q8WWZ7 1642 aa30.53■■■□□ 2.48
ARPC1B-201ENST00000252725 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
ARPC1B-201ENST00000252725 KIF27Q86VH2 1401 aa30.43■■■□□ 2.46
ARPC1B-201ENST00000252725 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
ARPC1B-201ENST00000252725 PBRM1Q86U86 1689 aa30.38■■■□□ 2.45
ARPC1B-201ENST00000252725 ERICH3Q5RHP9 1530 aa30.33■■■□□ 2.45
ARPC1B-201ENST00000252725 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
ARPC1B-201ENST00000252725 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
ARPC1B-201ENST00000252725 MAGI1Q96QZ7 1491 aaPredicted RBP30.3■■■□□ 2.44
ARPC1B-201ENST00000252725 IGF1RP08069 1367 aa30.27■■■□□ 2.44
ARPC1B-201ENST00000252725 ADAMTS12P58397 1594 aa30.19■■■□□ 2.42
ARPC1B-201ENST00000252725 EEA1Q15075 1411 aa30.18■■■□□ 2.42
ARPC1B-201ENST00000252725 SYNJ2O15056 1496 aa30.17■■■□□ 2.42
ARPC1B-201ENST00000252725 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
ARPC1B-201ENST00000252725 CUL7Q14999 1698 aa30.13■■■□□ 2.41
ARPC1B-201ENST00000252725 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
ARPC1B-201ENST00000252725 CHD1O14646 1710 aa30.1■■■□□ 2.41
ARPC1B-201ENST00000252725 CARMIL1Q5VZK9 1371 aa30.09■■■□□ 2.41
ARPC1B-201ENST00000252725 FBLN2P98095 1184 aa30.08■■■□□ 2.41
ARPC1B-201ENST00000252725 CSRNP3Q8WYN3 585 aa30.07■■■□□ 2.4
ARPC1B-201ENST00000252725 GRIN2AQ12879 1464 aa30.04■■■□□ 2.4
ARPC1B-201ENST00000252725 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
ARPC1B-201ENST00000252725 PRXQ9BXM0 1461 aa30■■■□□ 2.39
ARPC1B-201ENST00000252725 OSCARQ8IYS5 282 aa29.98■■■□□ 2.39
ARPC1B-201ENST00000252725 RAPGEF2Q9Y4G8 1499 aa29.96■■■□□ 2.39
ARPC1B-201ENST00000252725 NUP160Q12769 1436 aa29.9■■■□□ 2.38
ARPC1B-201ENST00000252725 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
ARPC1B-201ENST00000252725 KIF21BO75037 1637 aa29.83■■■□□ 2.37
ARPC1B-201ENST00000252725 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
ARPC1B-201ENST00000252725 KIAA0586Q9BVV6 1533 aa29.73■■■□□ 2.35
ARPC1B-201ENST00000252725 GOLGA3Q08378 1498 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms