RNA–Protein interactions for RNA: ENST00000443222.5

ARPC1B-209, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-209ENST00000443222 NISCHQ9Y2I1 1504 aa38.52■■■■□ 3.76
ARPC1B-209ENST00000443222 CCDC180Q9P1Z9 1646 aa34.35■■■■□ 3.09
ARPC1B-209ENST00000443222 ABCC9O60706 1549 aa33.88■■■■□ 3.01
ARPC1B-209ENST00000443222 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
ARPC1B-209ENST00000443222 NACADO15069 1562 aa32.36■■■□□ 2.77
ARPC1B-209ENST00000443222 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
ARPC1B-209ENST00000443222 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
ARPC1B-209ENST00000443222 ZCCHC6Q5VYS8 1495 aaKnown RBP32.05■■■□□ 2.72
ARPC1B-209ENST00000443222 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
ARPC1B-209ENST00000443222 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
ARPC1B-209ENST00000443222 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
ARPC1B-209ENST00000443222 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
ARPC1B-209ENST00000443222 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
ARPC1B-209ENST00000443222 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
ARPC1B-209ENST00000443222 SHROOM4Q9ULL8 1493 aa31.15■■■□□ 2.58
ARPC1B-209ENST00000443222 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
ARPC1B-209ENST00000443222 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
ARPC1B-209ENST00000443222 CECR2Q9BXF3 1484 aa30.47■■■□□ 2.47
ARPC1B-209ENST00000443222 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
ARPC1B-209ENST00000443222 NCAPD3P42695 1498 aa29.89■■■□□ 2.38
ARPC1B-209ENST00000443222 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
ARPC1B-209ENST00000443222 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
ARPC1B-209ENST00000443222 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
ARPC1B-209ENST00000443222 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
ARPC1B-209ENST00000443222 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
ARPC1B-209ENST00000443222 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
ARPC1B-209ENST00000443222 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
ARPC1B-209ENST00000443222 WIZO95785 1651 aa29.33■■■□□ 2.29
ARPC1B-209ENST00000443222 NESP48681 1621 aa29.27■■■□□ 2.28
ARPC1B-209ENST00000443222 RSF1Q96T23 1441 aaPredicted RBP29.24■■■□□ 2.27
ARPC1B-209ENST00000443222 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
ARPC1B-209ENST00000443222 LAMC3Q9Y6N6 1575 aa29.12■■■□□ 2.25
ARPC1B-209ENST00000443222 CUX2O14529 1486 aa29.03■■■□□ 2.24
ARPC1B-209ENST00000443222 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
ARPC1B-209ENST00000443222 CADPSQ9ULU8 1353 aa28.98■■■□□ 2.23
ARPC1B-209ENST00000443222 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
ARPC1B-209ENST00000443222 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
ARPC1B-209ENST00000443222 KIF21AQ7Z4S6 1674 aa28.88■■■□□ 2.21
ARPC1B-209ENST00000443222 CFTRP13569 1480 aa28.78■■■□□ 2.2
ARPC1B-209ENST00000443222 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
ARPC1B-209ENST00000443222 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
ARPC1B-209ENST00000443222 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
ARPC1B-209ENST00000443222 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
ARPC1B-209ENST00000443222 WDR62O43379 1518 aa28.6■■■□□ 2.17
ARPC1B-209ENST00000443222 PRDM2Q13029 1718 aa28.47■■■□□ 2.15
ARPC1B-209ENST00000443222 DNAJC5Q9H3Z4 198 aa28.46■■■□□ 2.15
ARPC1B-209ENST00000443222 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
ARPC1B-209ENST00000443222 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
ARPC1B-209ENST00000443222 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
ARPC1B-209ENST00000443222 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
ARPC1B-209ENST00000443222 ABCC8Q09428 1581 aa28.09■■■□□ 2.09
ARPC1B-209ENST00000443222 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
ARPC1B-209ENST00000443222 ZNF608Q9ULD9 1512 aaPredicted RBP27.98■■■□□ 2.07
ARPC1B-209ENST00000443222 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
ARPC1B-209ENST00000443222 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
ARPC1B-209ENST00000443222 CUX1P39880 1505 aa27.87■■■□□ 2.05
ARPC1B-209ENST00000443222 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
ARPC1B-209ENST00000443222 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
ARPC1B-209ENST00000443222 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
ARPC1B-209ENST00000443222 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.032e-6■■■■□ 19.5
ARPC1B-209ENST00000443222 SOGA1O94964 1423 aa27.75■■■□□ 2.03
ARPC1B-209ENST00000443222 OSCARQ8IYS5 282 aa27.7■■■□□ 2.02
ARPC1B-209ENST00000443222 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
ARPC1B-209ENST00000443222 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
ARPC1B-209ENST00000443222 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
ARPC1B-209ENST00000443222 BIVM-ERCC5R4GMW8 1640 aa27.54■■■□□ 2
ARPC1B-209ENST00000443222 TOP2BQ02880 1626 aa27.53■■■□□ 2
ARPC1B-209ENST00000443222 SYNJ1O43426 1573 aa27.53■■■□□ 2
ARPC1B-209ENST00000443222 ABCA10Q8WWZ4 1543 aa27.53■■■□□ 2
ARPC1B-209ENST00000443222 CHD1O14646 1710 aa27.51■■□□□ 1.99
ARPC1B-209ENST00000443222 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
ARPC1B-209ENST00000443222 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
ARPC1B-209ENST00000443222 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
ARPC1B-209ENST00000443222 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
ARPC1B-209ENST00000443222 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
ARPC1B-209ENST00000443222 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
ARPC1B-209ENST00000443222 FBLN2P98095 1184 aa27.37■■□□□ 1.97
ARPC1B-209ENST00000443222 RIMBP3CA6NJZ7 1639 aa27.36■■□□□ 1.97
ARPC1B-209ENST00000443222 RIMBP3BA6NNM3 1639 aa27.36■■□□□ 1.97
ARPC1B-209ENST00000443222 RIMBP3Q9UFD9 1639 aa27.36■■□□□ 1.97
ARPC1B-209ENST00000443222 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
ARPC1B-209ENST00000443222 ARHGEF11O15085 1522 aa27.33■■□□□ 1.97
ARPC1B-209ENST00000443222 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
ARPC1B-209ENST00000443222 CLASP1Q7Z460 1538 aa27.28■■□□□ 1.96
ARPC1B-209ENST00000443222 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
ARPC1B-209ENST00000443222 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
ARPC1B-209ENST00000443222 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
ARPC1B-209ENST00000443222 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
ARPC1B-209ENST00000443222 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
ARPC1B-209ENST00000443222 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
ARPC1B-209ENST00000443222 NUP160Q12769 1436 aa27.07■■□□□ 1.92
ARPC1B-209ENST00000443222 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
ARPC1B-209ENST00000443222 CYB5RLQ6IPT4 315 aa27.02■■□□□ 1.92
ARPC1B-209ENST00000443222 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
ARPC1B-209ENST00000443222 IGF1RP08069 1367 aa26.94■■□□□ 1.9
ARPC1B-209ENST00000443222 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
ARPC1B-209ENST00000443222 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
ARPC1B-209ENST00000443222 CUL7Q14999 1698 aa26.85■■□□□ 1.89
ARPC1B-209ENST00000443222 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
ARPC1B-209ENST00000443222 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms