RNA–Protein interactions for RNA: ENST00000417330.5

ARPC1B-203, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-203ENST00000417330 NISCHQ9Y2I1 1504 aa48.6■■■■■ 5.37
ARPC1B-203ENST00000417330 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
ARPC1B-203ENST00000417330 ABCC9O60706 1549 aa41.84■■■■■ 4.29
ARPC1B-203ENST00000417330 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
ARPC1B-203ENST00000417330 NACADO15069 1562 aa40.53■■■■■ 4.08
ARPC1B-203ENST00000417330 RB1CC1Q8TDY2 1594 aa40.52■■■■■ 4.08
ARPC1B-203ENST00000417330 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
ARPC1B-203ENST00000417330 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
ARPC1B-203ENST00000417330 DCAF8L2P0C7V8 631 aa40.2■■■■■ 4.03
ARPC1B-203ENST00000417330 UNC13AQ9UPW8 1703 aa39.75■■■■□ 3.95
ARPC1B-203ENST00000417330 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
ARPC1B-203ENST00000417330 BICRAQ9NZM4 1560 aa39.27■■■■□ 3.88
ARPC1B-203ENST00000417330 PABPN1Q86U42 306 aaKnown RBP eCLIP39■■■■□ 3.83
ARPC1B-203ENST00000417330 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
ARPC1B-203ENST00000417330 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
ARPC1B-203ENST00000417330 DNAJC5BQ9UF47 199 aa38.07■■■■□ 3.68
ARPC1B-203ENST00000417330 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
ARPC1B-203ENST00000417330 CECR2Q9BXF3 1484 aa37.75■■■■□ 3.63
ARPC1B-203ENST00000417330 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
ARPC1B-203ENST00000417330 BAZ1AQ9NRL2 1556 aaPredicted RBP37.69■■■■□ 3.62
ARPC1B-203ENST00000417330 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
ARPC1B-203ENST00000417330 SMARCA2P51531 1590 aa37.41■■■■□ 3.58
ARPC1B-203ENST00000417330 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
ARPC1B-203ENST00000417330 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
ARPC1B-203ENST00000417330 NCAPD3P42695 1498 aa37.33■■■■□ 3.57
ARPC1B-203ENST00000417330 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
ARPC1B-203ENST00000417330 WIZO95785 1651 aa37.09■■■■□ 3.53
ARPC1B-203ENST00000417330 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
ARPC1B-203ENST00000417330 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
ARPC1B-203ENST00000417330 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
ARPC1B-203ENST00000417330 LAMC3Q9Y6N6 1575 aa36.39■■■■□ 3.42
ARPC1B-203ENST00000417330 NESP48681 1621 aa36.29■■■■□ 3.4
ARPC1B-203ENST00000417330 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
ARPC1B-203ENST00000417330 CADPSQ9ULU8 1353 aa36.19■■■■□ 3.38
ARPC1B-203ENST00000417330 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
ARPC1B-203ENST00000417330 SUPT5HO00267 1087 aaKnown RBP36.1■■■■□ 3.37
ARPC1B-203ENST00000417330 CFTRP13569 1480 aa36.08■■■■□ 3.37
ARPC1B-203ENST00000417330 ERCC6Q03468 1493 aa36.06■■■■□ 3.36
ARPC1B-203ENST00000417330 KIF21AQ7Z4S6 1674 aa36.05■■■■□ 3.36
ARPC1B-203ENST00000417330 PDS5BQ9NTI5 1447 aa36.02■■■■□ 3.36
ARPC1B-203ENST00000417330 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
ARPC1B-203ENST00000417330 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
ARPC1B-203ENST00000417330 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
ARPC1B-203ENST00000417330 CUX2O14529 1486 aa35.69■■■■□ 3.3
ARPC1B-203ENST00000417330 MRC2Q9UBG0 1479 aa35.67■■■■□ 3.3
ARPC1B-203ENST00000417330 WDR62O43379 1518 aa35.6■■■■□ 3.29
ARPC1B-203ENST00000417330 URB2Q14146 1524 aaKnown RBP35.45■■■■□ 3.27
ARPC1B-203ENST00000417330 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
ARPC1B-203ENST00000417330 DNMBPQ6XZF7 1577 aa35.33■■■■□ 3.25
ARPC1B-203ENST00000417330 TOPBP1Q92547 1522 aa35.29■■■■□ 3.24
ARPC1B-203ENST00000417330 CUX1P39880 1505 aa35.11■■■■□ 3.21
ARPC1B-203ENST00000417330 IFT140Q96RY7 1462 aa35.01■■■■□ 3.19
ARPC1B-203ENST00000417330 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
ARPC1B-203ENST00000417330 POLA1P09884 1462 aaPredicted RBP34.99■■■■□ 3.19
ARPC1B-203ENST00000417330 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
ARPC1B-203ENST00000417330 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
ARPC1B-203ENST00000417330 FGD5Q6ZNL6 1462 aa34.94■■■■□ 3.18
ARPC1B-203ENST00000417330 WRNQ14191 1432 aaPredicted RBP eCLIP34.93■■■■□ 3.18
ARPC1B-203ENST00000417330 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
ARPC1B-203ENST00000417330 WDR97A6NE52 1622 aa34.82■■■■□ 3.16
ARPC1B-203ENST00000417330 SOGA1O94964 1423 aa34.79■■■■□ 3.16
ARPC1B-203ENST00000417330 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
ARPC1B-203ENST00000417330 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
ARPC1B-203ENST00000417330 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
ARPC1B-203ENST00000417330 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
ARPC1B-203ENST00000417330 ABCA5Q8WWZ7 1642 aa34.57■■■■□ 3.12
ARPC1B-203ENST00000417330 AQRO60306 1485 aaKnown RBP eCLIP34.57■■■■□ 3.122e-6■■■■□ 19.5
ARPC1B-203ENST00000417330 PBRM1Q86U86 1689 aa34.54■■■■□ 3.12
ARPC1B-203ENST00000417330 TDRD9Q8NDG6 1382 aaKnown RBP34.51■■■■□ 3.12
ARPC1B-203ENST00000417330 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
ARPC1B-203ENST00000417330 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
ARPC1B-203ENST00000417330 MAGI1Q96QZ7 1491 aaPredicted RBP34.35■■■■□ 3.09
ARPC1B-203ENST00000417330 CHD1O14646 1710 aa34.35■■■■□ 3.09
ARPC1B-203ENST00000417330 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
ARPC1B-203ENST00000417330 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
ARPC1B-203ENST00000417330 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
ARPC1B-203ENST00000417330 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
ARPC1B-203ENST00000417330 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
ARPC1B-203ENST00000417330 DNAJC5Q9H3Z4 198 aa34.16■■■■□ 3.06
ARPC1B-203ENST00000417330 TRIM41Q8WV44 630 aa34.14■■■■□ 3.06
ARPC1B-203ENST00000417330 OSCARQ8IYS5 282 aa34.1■■■■□ 3.05
ARPC1B-203ENST00000417330 CUL7Q14999 1698 aa34.08■■■■□ 3.05
ARPC1B-203ENST00000417330 FHAD1B1AJZ9 1412 aa34.05■■■■□ 3.04
ARPC1B-203ENST00000417330 CHMP7Q8WUX9 453 aaPredicted RBP34■■■■□ 3.03
ARPC1B-203ENST00000417330 FBLN2P98095 1184 aa33.99■■■■□ 3.03
ARPC1B-203ENST00000417330 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
ARPC1B-203ENST00000417330 IGF1RP08069 1367 aa33.96■■■■□ 3.03
ARPC1B-203ENST00000417330 CLASP1Q7Z460 1538 aa33.91■■■■□ 3.02
ARPC1B-203ENST00000417330 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
ARPC1B-203ENST00000417330 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
ARPC1B-203ENST00000417330 CEP170Q5SW79 1584 aa33.84■■■■□ 3.01
ARPC1B-203ENST00000417330 NUP160Q12769 1436 aa33.83■■■■□ 3.01
ARPC1B-203ENST00000417330 CARMIL1Q5VZK9 1371 aa33.77■■■■□ 3
ARPC1B-203ENST00000417330 EEA1Q15075 1411 aa33.75■■■□□ 2.99
ARPC1B-203ENST00000417330 RIMBP3CA6NJZ7 1639 aa33.7■■■□□ 2.99
ARPC1B-203ENST00000417330 RIMBP3BA6NNM3 1639 aa33.7■■■□□ 2.99
ARPC1B-203ENST00000417330 RIMBP3Q9UFD9 1639 aa33.7■■■□□ 2.99
ARPC1B-203ENST00000417330 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
ARPC1B-203ENST00000417330 ARHGEF11O15085 1522 aa33.67■■■□□ 2.98
ARPC1B-203ENST00000417330 SHROOM2Q13796 1616 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms