RNA–Protein interactions for RNA: ENST00000458033.5

ARPC1B-213, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-213ENST00000458033 NISCHQ9Y2I1 1504 aa48.6■■■■■ 5.37
ARPC1B-213ENST00000458033 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
ARPC1B-213ENST00000458033 ABCC9O60706 1549 aa42.16■■■■■ 4.34
ARPC1B-213ENST00000458033 RB1CC1Q8TDY2 1594 aa40.6■■■■■ 4.09
ARPC1B-213ENST00000458033 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
ARPC1B-213ENST00000458033 NACADO15069 1562 aa40.53■■■■■ 4.08
ARPC1B-213ENST00000458033 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
ARPC1B-213ENST00000458033 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
ARPC1B-213ENST00000458033 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
ARPC1B-213ENST00000458033 UNC13AQ9UPW8 1703 aa39.75■■■■□ 3.95
ARPC1B-213ENST00000458033 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
ARPC1B-213ENST00000458033 BICRAQ9NZM4 1560 aa39.32■■■■□ 3.88
ARPC1B-213ENST00000458033 PABPN1Q86U42 306 aaKnown RBP eCLIP39.29■■■■□ 3.88
ARPC1B-213ENST00000458033 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
ARPC1B-213ENST00000458033 DNAJC5BQ9UF47 199 aa38.7■■■■□ 3.79
ARPC1B-213ENST00000458033 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
ARPC1B-213ENST00000458033 CC2D2AQ9P2K1 1620 aa38.2■■■■□ 3.7
ARPC1B-213ENST00000458033 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
ARPC1B-213ENST00000458033 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
ARPC1B-213ENST00000458033 BAZ1AQ9NRL2 1556 aaPredicted RBP37.69■■■■□ 3.62
ARPC1B-213ENST00000458033 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
ARPC1B-213ENST00000458033 SMARCA2P51531 1590 aa37.41■■■■□ 3.58
ARPC1B-213ENST00000458033 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
ARPC1B-213ENST00000458033 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
ARPC1B-213ENST00000458033 NCAPD3P42695 1498 aa37.33■■■■□ 3.57
ARPC1B-213ENST00000458033 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
ARPC1B-213ENST00000458033 WIZO95785 1651 aa37.09■■■■□ 3.53
ARPC1B-213ENST00000458033 BAZ1BQ9UIG0 1483 aaKnown RBP37.07■■■■□ 3.53
ARPC1B-213ENST00000458033 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
ARPC1B-213ENST00000458033 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
ARPC1B-213ENST00000458033 NESP48681 1621 aa36.43■■■■□ 3.42
ARPC1B-213ENST00000458033 LAMC3Q9Y6N6 1575 aa36.43■■■■□ 3.42
ARPC1B-213ENST00000458033 ERCC6Q03468 1493 aa36.41■■■■□ 3.42
ARPC1B-213ENST00000458033 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
ARPC1B-213ENST00000458033 CADPSQ9ULU8 1353 aa36.19■■■■□ 3.38
ARPC1B-213ENST00000458033 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
ARPC1B-213ENST00000458033 KIF21AQ7Z4S6 1674 aa36.12■■■■□ 3.37
ARPC1B-213ENST00000458033 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
ARPC1B-213ENST00000458033 SUPT5HO00267 1087 aaKnown RBP36.1■■■■□ 3.37
ARPC1B-213ENST00000458033 CUX2O14529 1486 aa36.1■■■■□ 3.37
ARPC1B-213ENST00000458033 CFTRP13569 1480 aa36.08■■■■□ 3.37
ARPC1B-213ENST00000458033 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
ARPC1B-213ENST00000458033 CEP164Q9UPV0 1460 aa35.82■■■■□ 3.32
ARPC1B-213ENST00000458033 FANCD2Q9BXW9 1451 aa35.81■■■■□ 3.32
ARPC1B-213ENST00000458033 MRC2Q9UBG0 1479 aa35.79■■■■□ 3.32
ARPC1B-213ENST00000458033 WDR62O43379 1518 aa35.69■■■■□ 3.3
ARPC1B-213ENST00000458033 URB2Q14146 1524 aaKnown RBP35.46■■■■□ 3.27
ARPC1B-213ENST00000458033 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
ARPC1B-213ENST00000458033 DNMBPQ6XZF7 1577 aa35.33■■■■□ 3.25
ARPC1B-213ENST00000458033 TOPBP1Q92547 1522 aa35.29■■■■□ 3.24
ARPC1B-213ENST00000458033 CUX1P39880 1505 aa35.11■■■■□ 3.21
ARPC1B-213ENST00000458033 IFT140Q96RY7 1462 aa35.06■■■■□ 3.2
ARPC1B-213ENST00000458033 DNAJC5Q9H3Z4 198 aa35.04■■■■□ 3.2
ARPC1B-213ENST00000458033 BIVM-ERCC5R4GMW8 1640 aa34.99■■■■□ 3.19
ARPC1B-213ENST00000458033 POLA1P09884 1462 aaPredicted RBP34.99■■■■□ 3.19
ARPC1B-213ENST00000458033 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
ARPC1B-213ENST00000458033 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
ARPC1B-213ENST00000458033 FGD5Q6ZNL6 1462 aa34.94■■■■□ 3.18
ARPC1B-213ENST00000458033 WRNQ14191 1432 aaPredicted RBP eCLIP34.93■■■■□ 3.18
ARPC1B-213ENST00000458033 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
ARPC1B-213ENST00000458033 ZNF608Q9ULD9 1512 aaPredicted RBP34.86■■■■□ 3.17
ARPC1B-213ENST00000458033 WDR97A6NE52 1622 aa34.82■■■■□ 3.16
ARPC1B-213ENST00000458033 EIF4G3O43432 1585 aaKnown RBP34.82■■■■□ 3.16
ARPC1B-213ENST00000458033 SOGA1O94964 1423 aa34.79■■■■□ 3.16
ARPC1B-213ENST00000458033 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
ARPC1B-213ENST00000458033 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
ARPC1B-213ENST00000458033 AQRO60306 1485 aaKnown RBP eCLIP34.62■■■■□ 3.132e-6■■■■□ 19.5
ARPC1B-213ENST00000458033 ABCA5Q8WWZ7 1642 aa34.57■■■■□ 3.12
ARPC1B-213ENST00000458033 PBRM1Q86U86 1689 aa34.54■■■■□ 3.12
ARPC1B-213ENST00000458033 TDRD9Q8NDG6 1382 aaKnown RBP34.52■■■■□ 3.12
ARPC1B-213ENST00000458033 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
ARPC1B-213ENST00000458033 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
ARPC1B-213ENST00000458033 CHD1O14646 1710 aa34.44■■■■□ 3.1
ARPC1B-213ENST00000458033 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
ARPC1B-213ENST00000458033 SNAPC4Q5SXM2 1469 aa34.36■■■■□ 3.09
ARPC1B-213ENST00000458033 MAGI1Q96QZ7 1491 aaPredicted RBP34.35■■■■□ 3.09
ARPC1B-213ENST00000458033 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
ARPC1B-213ENST00000458033 FBLN2P98095 1184 aa34.22■■■■□ 3.07
ARPC1B-213ENST00000458033 SYNJ2O15056 1496 aa34.2■■■■□ 3.06
ARPC1B-213ENST00000458033 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
ARPC1B-213ENST00000458033 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
ARPC1B-213ENST00000458033 TRIM41Q8WV44 630 aa34.14■■■■□ 3.06
ARPC1B-213ENST00000458033 CHMP7Q8WUX9 453 aaPredicted RBP34.13■■■■□ 3.05
ARPC1B-213ENST00000458033 CUL7Q14999 1698 aa34.08■■■■□ 3.05
ARPC1B-213ENST00000458033 FHAD1B1AJZ9 1412 aa34.05■■■■□ 3.04
ARPC1B-213ENST00000458033 RIMBP3CA6NJZ7 1639 aa34.04■■■■□ 3.04
ARPC1B-213ENST00000458033 RIMBP3BA6NNM3 1639 aa34.04■■■■□ 3.04
ARPC1B-213ENST00000458033 RIMBP3Q9UFD9 1639 aa34.04■■■■□ 3.04
ARPC1B-213ENST00000458033 CLASP1Q7Z460 1538 aa34■■■■□ 3.03
ARPC1B-213ENST00000458033 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
ARPC1B-213ENST00000458033 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
ARPC1B-213ENST00000458033 IGF1RP08069 1367 aa33.96■■■■□ 3.03
ARPC1B-213ENST00000458033 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
ARPC1B-213ENST00000458033 CHIC1Q5VXU3 224 aa33.89■■■■□ 3.02
ARPC1B-213ENST00000458033 CEP170Q5SW79 1584 aa33.84■■■■□ 3.01
ARPC1B-213ENST00000458033 NUP160Q12769 1436 aa33.83■■■■□ 3.01
ARPC1B-213ENST00000458033 CARMIL1Q5VZK9 1371 aa33.77■■■■□ 3
ARPC1B-213ENST00000458033 EEA1Q15075 1411 aa33.75■■■□□ 2.99
ARPC1B-213ENST00000458033 ARAP1Q96P48 1450 aa33.69■■■□□ 2.98
ARPC1B-213ENST00000458033 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms