RNA–Protein interactions for RNA: ENST00000488086.1

MTHFD2-207, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-207ENST00000488086 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
MTHFD2-207ENST00000488086 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
MTHFD2-207ENST00000488086 NISCHQ9Y2I1 1504 aa20.64■□□□□ 0.9
MTHFD2-207ENST00000488086 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
MTHFD2-207ENST00000488086 PHF23Q9BUL5 403 aaPredicted RBP20.32■□□□□ 0.84
MTHFD2-207ENST00000488086 FOXD1Q16676 465 aa19.18■□□□□ 0.66
MTHFD2-207ENST00000488086 ABCC9O60706 1549 aa18.61■□□□□ 0.57
MTHFD2-207ENST00000488086 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
MTHFD2-207ENST00000488086 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
MTHFD2-207ENST00000488086 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
MTHFD2-207ENST00000488086 ADRA2BP18089 450 aa17.98■□□□□ 0.47
MTHFD2-207ENST00000488086 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
MTHFD2-207ENST00000488086 MSH5O43196 834 aa17.82■□□□□ 0.44
MTHFD2-207ENST00000488086 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
MTHFD2-207ENST00000488086 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
MTHFD2-207ENST00000488086 NACADO15069 1562 aa17.62■□□□□ 0.41
MTHFD2-207ENST00000488086 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
MTHFD2-207ENST00000488086 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
MTHFD2-207ENST00000488086 UNC13AQ9UPW8 1703 aa17.31■□□□□ 0.36
MTHFD2-207ENST00000488086 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
MTHFD2-207ENST00000488086 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
MTHFD2-207ENST00000488086 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
MTHFD2-207ENST00000488086 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
MTHFD2-207ENST00000488086 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
MTHFD2-207ENST00000488086 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
MTHFD2-207ENST00000488086 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
MTHFD2-207ENST00000488086 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
MTHFD2-207ENST00000488086 SCRIBQ14160 1630 aa16.8■□□□□ 0.28
MTHFD2-207ENST00000488086 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
MTHFD2-207ENST00000488086 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
MTHFD2-207ENST00000488086 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
MTHFD2-207ENST00000488086 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
MTHFD2-207ENST00000488086 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
MTHFD2-207ENST00000488086 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
MTHFD2-207ENST00000488086 CUX2O14529 1486 aa16.19■□□□□ 0.18
MTHFD2-207ENST00000488086 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
MTHFD2-207ENST00000488086 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
MTHFD2-207ENST00000488086 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
MTHFD2-207ENST00000488086 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
MTHFD2-207ENST00000488086 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
MTHFD2-207ENST00000488086 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
MTHFD2-207ENST00000488086 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
MTHFD2-207ENST00000488086 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
MTHFD2-207ENST00000488086 NESP48681 1621 aa15.97■□□□□ 0.15
MTHFD2-207ENST00000488086 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
MTHFD2-207ENST00000488086 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
MTHFD2-207ENST00000488086 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
MTHFD2-207ENST00000488086 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
MTHFD2-207ENST00000488086 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
MTHFD2-207ENST00000488086 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
MTHFD2-207ENST00000488086 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
MTHFD2-207ENST00000488086 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
MTHFD2-207ENST00000488086 HOXD11P31277 338 aaPredicted RBP15.71■□□□□ 0.11
MTHFD2-207ENST00000488086 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
MTHFD2-207ENST00000488086 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
MTHFD2-207ENST00000488086 WDR62O43379 1518 aa15.65■□□□□ 0.1
MTHFD2-207ENST00000488086 WIZO95785 1651 aa15.63■□□□□ 0.09
MTHFD2-207ENST00000488086 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
MTHFD2-207ENST00000488086 CFTRP13569 1480 aa15.56■□□□□ 0.08
MTHFD2-207ENST00000488086 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
MTHFD2-207ENST00000488086 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
MTHFD2-207ENST00000488086 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
MTHFD2-207ENST00000488086 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
MTHFD2-207ENST00000488086 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
MTHFD2-207ENST00000488086 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
MTHFD2-207ENST00000488086 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
MTHFD2-207ENST00000488086 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
MTHFD2-207ENST00000488086 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
MTHFD2-207ENST00000488086 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
MTHFD2-207ENST00000488086 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
MTHFD2-207ENST00000488086 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
MTHFD2-207ENST00000488086 CCDC88BA6NC98 1476 aa15.3■□□□□ 0.04
MTHFD2-207ENST00000488086 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
MTHFD2-207ENST00000488086 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
MTHFD2-207ENST00000488086 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
MTHFD2-207ENST00000488086 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
MTHFD2-207ENST00000488086 TOPBP1Q92547 1522 aa15.23■□□□□ 0.03
MTHFD2-207ENST00000488086 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
MTHFD2-207ENST00000488086 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
MTHFD2-207ENST00000488086 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
MTHFD2-207ENST00000488086 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
MTHFD2-207ENST00000488086 ARHGEF11O15085 1522 aa15.14■□□□□ 0.01
MTHFD2-207ENST00000488086 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
MTHFD2-207ENST00000488086 KCNA4P22459 653 aa15.12■□□□□ 0.01
MTHFD2-207ENST00000488086 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
MTHFD2-207ENST00000488086 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.018e-7■■■□□ 16.6
MTHFD2-207ENST00000488086 POLA1P09884 1462 aaPredicted RBP15.07■□□□□ 0
MTHFD2-207ENST00000488086 CHD1O14646 1710 aa15.03■□□□□ -0
MTHFD2-207ENST00000488086 CYB5RLQ6IPT4 315 aa15.01□□□□□ -0.01
MTHFD2-207ENST00000488086 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
MTHFD2-207ENST00000488086 SOGA1O94964 1423 aa15□□□□□ -0.01
MTHFD2-207ENST00000488086 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
MTHFD2-207ENST00000488086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
MTHFD2-207ENST00000488086 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
MTHFD2-207ENST00000488086 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
MTHFD2-207ENST00000488086 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
MTHFD2-207ENST00000488086 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
MTHFD2-207ENST00000488086 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
MTHFD2-207ENST00000488086 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
MTHFD2-207ENST00000488086 CUX1P39880 1505 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms