RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.09
NIP7-201ENST00000254940 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
NIP7-201ENST00000254940 ABCC9O60706 1549 aa24.09■■□□□ 1.45
NIP7-201ENST00000254940 DCAF8L2P0C7V8 631 aa23.79■■□□□ 1.4
NIP7-201ENST00000254940 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
NIP7-201ENST00000254940 NACADO15069 1562 aa23.1■■□□□ 1.29
NIP7-201ENST00000254940 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
NIP7-201ENST00000254940 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
NIP7-201ENST00000254940 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
NIP7-201ENST00000254940 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
NIP7-201ENST00000254940 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
NIP7-201ENST00000254940 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
NIP7-201ENST00000254940 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
NIP7-201ENST00000254940 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
NIP7-201ENST00000254940 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
NIP7-201ENST00000254940 EIF4G1Q04637 1599 aaKnown RBP21.83■■□□□ 1.09
NIP7-201ENST00000254940 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
NIP7-201ENST00000254940 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
NIP7-201ENST00000254940 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
NIP7-201ENST00000254940 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
NIP7-201ENST00000254940 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
NIP7-201ENST00000254940 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
NIP7-201ENST00000254940 RSF1Q96T23 1441 aaPredicted RBP21.68■■□□□ 1.06
NIP7-201ENST00000254940 WIZO95785 1651 aa21.66■■□□□ 1.06
NIP7-201ENST00000254940 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
NIP7-201ENST00000254940 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
NIP7-201ENST00000254940 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
NIP7-201ENST00000254940 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
NIP7-201ENST00000254940 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
NIP7-201ENST00000254940 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
NIP7-201ENST00000254940 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
NIP7-201ENST00000254940 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
NIP7-201ENST00000254940 NESP48681 1621 aa21.01■□□□□ 0.95
NIP7-201ENST00000254940 CADPSQ9ULU8 1353 aa20.83■□□□□ 0.92
NIP7-201ENST00000254940 CFTRP13569 1480 aa20.77■□□□□ 0.91
NIP7-201ENST00000254940 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
NIP7-201ENST00000254940 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
NIP7-201ENST00000254940 ERCC6Q03468 1493 aa20.65■□□□□ 0.9
NIP7-201ENST00000254940 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
NIP7-201ENST00000254940 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
NIP7-201ENST00000254940 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
NIP7-201ENST00000254940 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
NIP7-201ENST00000254940 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
NIP7-201ENST00000254940 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
NIP7-201ENST00000254940 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
NIP7-201ENST00000254940 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
NIP7-201ENST00000254940 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
NIP7-201ENST00000254940 CUX1P39880 1505 aa20.42■□□□□ 0.86
NIP7-201ENST00000254940 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
NIP7-201ENST00000254940 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
NIP7-201ENST00000254940 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
NIP7-201ENST00000254940 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
NIP7-201ENST00000254940 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
NIP7-201ENST00000254940 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
NIP7-201ENST00000254940 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
NIP7-201ENST00000254940 WDR62O43379 1518 aa20.27■□□□□ 0.84
NIP7-201ENST00000254940 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
NIP7-201ENST00000254940 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
NIP7-201ENST00000254940 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
NIP7-201ENST00000254940 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
NIP7-201ENST00000254940 CUX2O14529 1486 aa20.18■□□□□ 0.82
NIP7-201ENST00000254940 SOGA1O94964 1423 aa20.17■□□□□ 0.82
NIP7-201ENST00000254940 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
NIP7-201ENST00000254940 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
NIP7-201ENST00000254940 RUSC2Q8N2Y8 1516 aa20.12■□□□□ 0.81
NIP7-201ENST00000254940 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
NIP7-201ENST00000254940 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.81e-8■■■□□ 17.1
NIP7-201ENST00000254940 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
NIP7-201ENST00000254940 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
NIP7-201ENST00000254940 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
NIP7-201ENST00000254940 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
NIP7-201ENST00000254940 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
NIP7-201ENST00000254940 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
NIP7-201ENST00000254940 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
NIP7-201ENST00000254940 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
NIP7-201ENST00000254940 FBLN2P98095 1184 aa19.88■□□□□ 0.77
NIP7-201ENST00000254940 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
NIP7-201ENST00000254940 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
NIP7-201ENST00000254940 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
NIP7-201ENST00000254940 IGF1RP08069 1367 aa19.83■□□□□ 0.76
NIP7-201ENST00000254940 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
NIP7-201ENST00000254940 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
NIP7-201ENST00000254940 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
NIP7-201ENST00000254940 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
NIP7-201ENST00000254940 CHMP7Q8WUX9 453 aaPredicted RBP19.73■□□□□ 0.75
NIP7-201ENST00000254940 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
NIP7-201ENST00000254940 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
NIP7-201ENST00000254940 EEA1Q15075 1411 aa19.69■□□□□ 0.74
NIP7-201ENST00000254940 ADAMTS12P58397 1594 aa19.69■□□□□ 0.74
NIP7-201ENST00000254940 CHD1O14646 1710 aa19.68■□□□□ 0.74
NIP7-201ENST00000254940 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
NIP7-201ENST00000254940 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.74
NIP7-201ENST00000254940 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
NIP7-201ENST00000254940 CUL7Q14999 1698 aa19.63■□□□□ 0.73
NIP7-201ENST00000254940 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
NIP7-201ENST00000254940 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
NIP7-201ENST00000254940 GRIN2AQ12879 1464 aa19.58■□□□□ 0.73
NIP7-201ENST00000254940 KIF21BO75037 1637 aa19.55■□□□□ 0.72
NIP7-201ENST00000254940 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
NIP7-201ENST00000254940 CEP170Q5SW79 1584 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms