RNA–Protein interactions for RNA: ENST00000484375.5

ARPC1B-218, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-218ENST00000484375 NISCHQ9Y2I1 1504 aa54.16■■■■■ 6.26
ARPC1B-218ENST00000484375 CCDC180Q9P1Z9 1646 aa48.14■■■■■ 5.3
ARPC1B-218ENST00000484375 ABCC9O60706 1549 aa46.49■■■■■ 5.03
ARPC1B-218ENST00000484375 ZCCHC6Q5VYS8 1495 aaKnown RBP45.22■■■■■ 4.83
ARPC1B-218ENST00000484375 NACADO15069 1562 aa45.11■■■■■ 4.81
ARPC1B-218ENST00000484375 RB1CC1Q8TDY2 1594 aa45.07■■■■■ 4.81
ARPC1B-218ENST00000484375 MYO15BQ96JP2 1530 aa45.01■■■■■ 4.8
ARPC1B-218ENST00000484375 DCAF8L2P0C7V8 631 aa44.94■■■■■ 4.78
ARPC1B-218ENST00000484375 DCAF1Q9Y4B6 1507 aa44.93■■■■■ 4.78
ARPC1B-218ENST00000484375 UNC13AQ9UPW8 1703 aa44.02■■■■■ 4.64
ARPC1B-218ENST00000484375 SCRIBQ14160 1630 aa43.8■■■■■ 4.6
ARPC1B-218ENST00000484375 BICRAQ9NZM4 1560 aa43.57■■■■■ 4.57
ARPC1B-218ENST00000484375 PABPN1Q86U42 306 aaKnown RBP eCLIP43.41■■■■■ 4.54
ARPC1B-218ENST00000484375 SHROOM4Q9ULL8 1493 aa43.37■■■■■ 4.53
ARPC1B-218ENST00000484375 EIF4G1Q04637 1599 aaKnown RBP42.44■■■■■ 4.39
ARPC1B-218ENST00000484375 CC2D2AQ9P2K1 1620 aa42.16■■■■■ 4.34
ARPC1B-218ENST00000484375 DNAJC5BQ9UF47 199 aa42.15■■■■■ 4.34
ARPC1B-218ENST00000484375 BAZ1AQ9NRL2 1556 aaPredicted RBP42.03■■■■■ 4.32
ARPC1B-218ENST00000484375 CECR2Q9BXF3 1484 aa42.03■■■■■ 4.32
ARPC1B-218ENST00000484375 SMARCA4P51532 1647 aa41.98■■■■■ 4.31
ARPC1B-218ENST00000484375 SMARCA2P51531 1590 aa41.68■■■■■ 4.26
ARPC1B-218ENST00000484375 MROH2BQ7Z745 1585 aa41.68■■■■■ 4.26
ARPC1B-218ENST00000484375 PEG3Q9GZU2 1588 aa41.6■■■■■ 4.25
ARPC1B-218ENST00000484375 ATAD2BQ9ULI0 1458 aa41.6■■■■■ 4.25
ARPC1B-218ENST00000484375 NCAPD3P42695 1498 aa41.54■■■■■ 4.24
ARPC1B-218ENST00000484375 HMGXB3Q12766 1538 aa41.46■■■■■ 4.23
ARPC1B-218ENST00000484375 RSF1Q96T23 1441 aaPredicted RBP41.34■■■■■ 4.21
ARPC1B-218ENST00000484375 BAZ1BQ9UIG0 1483 aaKnown RBP41.33■■■■■ 4.21
ARPC1B-218ENST00000484375 WIZO95785 1651 aa41.29■■■■■ 4.2
ARPC1B-218ENST00000484375 TOP2AP11388 1531 aaKnown RBP40.94■■■■■ 4.14
ARPC1B-218ENST00000484375 SUPT5HO00267 1087 aaKnown RBP40.49■■■■■ 4.07
ARPC1B-218ENST00000484375 LAMC3Q9Y6N6 1575 aa40.48■■■■■ 4.07
ARPC1B-218ENST00000484375 CCDC88BA6NC98 1476 aa40.36■■■■■ 4.05
ARPC1B-218ENST00000484375 CADPSQ9ULU8 1353 aa40.33■■■■■ 4.05
ARPC1B-218ENST00000484375 NESP48681 1621 aa40.32■■■■■ 4.05
ARPC1B-218ENST00000484375 CFTRP13569 1480 aa40.19■■■■■ 4.03
ARPC1B-218ENST00000484375 ERCC6Q03468 1493 aa40.15■■■■■ 4.02
ARPC1B-218ENST00000484375 PDS5BQ9NTI5 1447 aa40.15■■■■■ 4.02
ARPC1B-218ENST00000484375 PRDM2Q13029 1718 aa40.11■■■■■ 4.01
ARPC1B-218ENST00000484375 KIF21AQ7Z4S6 1674 aa39.99■■■■□ 3.99
ARPC1B-218ENST00000484375 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.98
ARPC1B-218ENST00000484375 CEP164Q9UPV0 1460 aa39.85■■■■□ 3.97
ARPC1B-218ENST00000484375 THOC2Q8NI27 1593 aaKnown RBP39.76■■■■□ 3.96
ARPC1B-218ENST00000484375 MRC2Q9UBG0 1479 aa39.69■■■■□ 3.94
ARPC1B-218ENST00000484375 CUX2O14529 1486 aa39.63■■■■□ 3.94
ARPC1B-218ENST00000484375 WDR62O43379 1518 aa39.56■■■■□ 3.92
ARPC1B-218ENST00000484375 ABCC8Q09428 1581 aa39.43■■■■□ 3.9
ARPC1B-218ENST00000484375 URB2Q14146 1524 aaKnown RBP39.41■■■■□ 3.9
ARPC1B-218ENST00000484375 DNMBPQ6XZF7 1577 aa39.33■■■■□ 3.89
ARPC1B-218ENST00000484375 TOPBP1Q92547 1522 aa39.29■■■■□ 3.88
ARPC1B-218ENST00000484375 CUX1P39880 1505 aa39.1■■■■□ 3.85
ARPC1B-218ENST00000484375 WRNQ14191 1432 aaPredicted RBP eCLIP39.04■■■■□ 3.84
ARPC1B-218ENST00000484375 IFT140Q96RY7 1462 aa38.99■■■■□ 3.83
ARPC1B-218ENST00000484375 BIVM-ERCC5R4GMW8 1640 aa38.98■■■■□ 3.83
ARPC1B-218ENST00000484375 POLA1P09884 1462 aaPredicted RBP38.97■■■■□ 3.83
ARPC1B-218ENST00000484375 TOP2BQ02880 1626 aa38.96■■■■□ 3.83
ARPC1B-218ENST00000484375 FGD5Q6ZNL6 1462 aa38.93■■■■□ 3.82
ARPC1B-218ENST00000484375 SYNJ1O43426 1573 aa38.89■■■■□ 3.82
ARPC1B-218ENST00000484375 TARBP1Q13395 1621 aaKnown RBP38.85■■■■□ 3.81
ARPC1B-218ENST00000484375 SOGA1O94964 1423 aa38.8■■■■□ 3.8
ARPC1B-218ENST00000484375 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
ARPC1B-218ENST00000484375 RAD54L2Q9Y4B4 1467 aa38.72■■■■□ 3.79
ARPC1B-218ENST00000484375 EIF4G3O43432 1585 aaKnown RBP38.65■■■■□ 3.78
ARPC1B-218ENST00000484375 ZNF608Q9ULD9 1512 aaPredicted RBP38.65■■■■□ 3.78
ARPC1B-218ENST00000484375 ABCA10Q8WWZ4 1543 aa38.62■■■■□ 3.77
ARPC1B-218ENST00000484375 AQRO60306 1485 aaKnown RBP eCLIP38.48■■■■□ 3.752e-6■■■■■ 27
ARPC1B-218ENST00000484375 TDRD9Q8NDG6 1382 aaKnown RBP38.47■■■■□ 3.75
ARPC1B-218ENST00000484375 ABCA5Q8WWZ7 1642 aa38.45■■■■□ 3.75
ARPC1B-218ENST00000484375 GAPVD1Q14C86 1478 aa38.4■■■■□ 3.74
ARPC1B-218ENST00000484375 PBRM1Q86U86 1689 aa38.38■■■■□ 3.73
ARPC1B-218ENST00000484375 GRIN2BQ13224 1484 aa38.36■■■■□ 3.73
ARPC1B-218ENST00000484375 TRIM41Q8WV44 630 aa38.32■■■■□ 3.72
ARPC1B-218ENST00000484375 MAGI1Q96QZ7 1491 aaPredicted RBP38.26■■■■□ 3.72
ARPC1B-218ENST00000484375 KIF27Q86VH2 1401 aa38.22■■■■□ 3.71
ARPC1B-218ENST00000484375 SNAPC4Q5SXM2 1469 aa38.22■■■■□ 3.71
ARPC1B-218ENST00000484375 ERICH3Q5RHP9 1530 aa38.21■■■■□ 3.71
ARPC1B-218ENST00000484375 CHD1O14646 1710 aa38.1■■■■□ 3.69
ARPC1B-218ENST00000484375 SYNJ2O15056 1496 aa38.08■■■■□ 3.69
ARPC1B-218ENST00000484375 ADAMTS12P58397 1594 aa38.06■■■■□ 3.68
ARPC1B-218ENST00000484375 CHIC1Q5VXU3 224 aa38.01■■■■□ 3.68
ARPC1B-218ENST00000484375 CUL7Q14999 1698 aa37.99■■■■□ 3.67
ARPC1B-218ENST00000484375 FHAD1B1AJZ9 1412 aa37.98■■■■□ 3.67
ARPC1B-218ENST00000484375 OSCARQ8IYS5 282 aa37.96■■■■□ 3.67
ARPC1B-218ENST00000484375 CHMP7Q8WUX9 453 aaPredicted RBP37.96■■■■□ 3.67
ARPC1B-218ENST00000484375 FBLN2P98095 1184 aa37.95■■■■□ 3.67
ARPC1B-218ENST00000484375 IGF1RP08069 1367 aa37.91■■■■□ 3.66
ARPC1B-218ENST00000484375 GRIN2AQ12879 1464 aa37.86■■■■□ 3.65
ARPC1B-218ENST00000484375 EEA1Q15075 1411 aa37.81■■■■□ 3.64
ARPC1B-218ENST00000484375 DNAJC5Q9H3Z4 198 aa37.81■■■■□ 3.64
ARPC1B-218ENST00000484375 RUSC2Q8N2Y8 1516 aa37.81■■■■□ 3.64
ARPC1B-218ENST00000484375 CARMIL1Q5VZK9 1371 aa37.73■■■■□ 3.63
ARPC1B-218ENST00000484375 CLASP1Q7Z460 1538 aa37.66■■■■□ 3.62
ARPC1B-218ENST00000484375 NUP160Q12769 1436 aa37.66■■■■□ 3.62
ARPC1B-218ENST00000484375 CEP170Q5SW79 1584 aa37.63■■■■□ 3.61
ARPC1B-218ENST00000484375 RAPGEF2Q9Y4G8 1499 aa37.61■■■■□ 3.61
ARPC1B-218ENST00000484375 CSRNP3Q8WYN3 585 aa37.55■■■■□ 3.6
ARPC1B-218ENST00000484375 PRXQ9BXM0 1461 aa37.53■■■■□ 3.6
ARPC1B-218ENST00000484375 KIAA0586Q9BVV6 1533 aa37.41■■■■□ 3.58
ARPC1B-218ENST00000484375 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
ARPC1B-218ENST00000484375 SHROOM2Q13796 1616 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms