Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC20.01■□□□□ 0.798e-7■■□□□ 12.1
PABPN1Q86U42 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC19.55■□□□□ 0.728e-7■■□□□ 12.1
PABPN1Q86U42 SLC2A4RG-208ENST00000496425 502 ntTSL 236.44■■■■□ 3.427e-8■■□□□ 12.1
PABPN1Q86U42 CCNL2-216ENST00000488340 1598 ntTSL 240.67■■■■■ 4.19e-15■■□□□ 12.1
PABPN1Q86U42 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC34.3■■■■□ 3.086e-8■■□□□ 12.1
PABPN1Q86U42 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.266e-8■■□□□ 12.1
PABPN1Q86U42 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.561e-6■■□□□ 12.1
PABPN1Q86U42 RANBP3-211ENST00000587479 547 ntTSL 432.03■■■□□ 2.728e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.688e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.548e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-229ENST00000592771 1937 ntTSL 1 (best)24.06■■□□□ 1.448e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-206ENST00000586344 2554 ntTSL 222■■□□□ 1.118e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.538e-7■■□□□ 12.1
PABPN1Q86U42 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.288e-7■■□□□ 12.1
PABPN1Q86U42 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC42.85■■■■■ 4.451e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-216ENST00000583025 955 ntTSL 239.01■■■■□ 3.841e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.11e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.11e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.811e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.811e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-213ENST00000582715 279 ntTSL 532.36■■■□□ 2.771e-19■■□□□ 12.1
PABPN1Q86U42 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.181e-19■■□□□ 12.1
PABPN1Q86U42 TGFBI-204ENST00000504411 1033 ntTSL 216.23■□□□□ 0.194e-7■■□□□ 12.1
PABPN1Q86U42 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.071e-6■■□□□ 12.1
PABPN1Q86U42 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.021e-6■■□□□ 12.1
PABPN1Q86U42 GAA-207ENST00000573556 756 ntTSL 238.12■■■■□ 3.699e-7■■□□□ 12.1
PABPN1Q86U42 WDR59-216ENST00000569183 949 ntTSL 227.63■■■□□ 2.016e-8■■□□□ 12.1
PABPN1Q86U42 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.669e-7■■□□□ 12.1
PABPN1Q86U42 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.539e-7■■□□□ 12.1
PABPN1Q86U42 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.538e-8■■□□□ 12.1
PABPN1Q86U42 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.38e-8■■□□□ 12.1
PABPN1Q86U42 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.158e-8■■□□□ 12.1
PABPN1Q86U42 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC19.67■□□□□ 0.748e-8■■□□□ 12.1
PABPN1Q86U42 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.18e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-201ENST00000460601 2137 ntTSL 1 (best)30.49■■■□□ 2.478e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-209ENST00000486263 708 ntTSL 226.32■■□□□ 1.88e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-205ENST00000477741 2070 ntTSL 1 (best)26.29■■□□□ 1.88e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-204ENST00000474543 2047 ntTSL 524.9■■□□□ 1.588e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-207ENST00000479207 1112 ntTSL 324.88■■□□□ 1.578e-7■■□□□ 12.1
PABPN1Q86U42 SFSWAP-208ENST00000539506 3149 ntTSL 519.87■□□□□ 0.778e-7■■□□□ 12.1
PABPN1Q86U42 NELFCD-206ENST00000478389 3581 ntTSL 212.96□□□□□ -0.348e-7■■□□□ 12.1
PABPN1Q86U42 MSH5-217ENST00000494458 520 ntTSL 211.99□□□□□ -0.491e-6■■□□□ 12.1
PABPN1Q86U42 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC20.02■□□□□ 0.81e-6■■□□□ 12.1
PABPN1Q86U42 GRAMD1A-212ENST00000600231 2534 ntTSL 235.74■■■■□ 3.311e-6■■□□□ 12.1
PABPN1Q86U42 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC33.76■■■■□ 31e-6■■□□□ 12.1
PABPN1Q86U42 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.821e-6■■□□□ 12.1
PABPN1Q86U42 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC23.7■■□□□ 1.381e-6■■□□□ 12.1
PABPN1Q86U42 MVD-213ENST00000566636 863 ntTSL 340.56■■■■■ 4.081e-8■■□□□ 12.1
PABPN1Q86U42 MVD-216ENST00000568709 809 ntTSL 537.08■■■■□ 3.531e-8■■□□□ 12.1
PABPN1Q86U42 MVD-208ENST00000563785 888 ntTSL 235.84■■■■□ 3.331e-8■■□□□ 12.1
PABPN1Q86U42 AKAP1-209ENST00000572560 442 ntTSL 333.88■■■■□ 3.011e-6■■□□□ 12.1
PABPN1Q86U42 MVD-206ENST00000563170 904 ntTSL 332.64■■■□□ 2.821e-8■■□□□ 12.1
PABPN1Q86U42 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.591e-6■■□□□ 12.1
PABPN1Q86U42 AKAP1-214ENST00000575032 570 ntTSL 324.03■■□□□ 1.441e-6■■□□□ 12.1
PABPN1Q86U42 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.361e-6■■□□□ 12.1
PABPN1Q86U42 AKAP1-203ENST00000481416 4089 ntTSL 514.81□□□□□ -0.041e-6■■□□□ 12.1
PABPN1Q86U42 SORBS3-202ENST00000517500 1228 ntTSL 242.56■■■■■ 4.43e-8■■□□□ 12
PABPN1Q86U42 SORBS3-212ENST00000521787 561 ntTSL 439.16■■■■□ 3.863e-8■■□□□ 12
PABPN1Q86U42 SORBS3-214ENST00000522315 563 ntTSL 437.55■■■■□ 3.63e-8■■□□□ 12
PABPN1Q86U42 PCYT2-211ENST00000572924 732 ntTSL 228.97■■■□□ 2.239e-10■■□□□ 12
PABPN1Q86U42 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC30.39■■■□□ 2.462e-6■■□□□ 12
PABPN1Q86U42 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.362e-6■■□□□ 12
PABPN1Q86U42 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.222e-6■■□□□ 12
PABPN1Q86U42 CDK5RAP3-205ENST00000577802 415 ntTSL 224.2■■□□□ 1.462e-11■■□□□ 12
PABPN1Q86U42 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC40.81■■■■■ 4.128e-7■■□□□ 12
PABPN1Q86U42 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC27.49■■□□□ 1.998e-7■■□□□ 12
PABPN1Q86U42 COL6A1-205ENST00000492851 435 ntTSL 325.58■■□□□ 1.695e-7■■□□□ 12
PABPN1Q86U42 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC24.37■■□□□ 1.498e-7■■□□□ 12
PABPN1Q86U42 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC35.82■■■■□ 3.321e-6■■□□□ 12
PABPN1Q86U42 SPIRE2-210ENST00000569108 2409 ntTSL 1 (best)31.4■■■□□ 2.621e-6■■□□□ 12
PABPN1Q86U42 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.29e-7■■□□□ 12
PABPN1Q86U42 MED24-225ENST00000580885 1963 ntTSL 529.39■■■□□ 2.33e-6■■□□□ 12
PABPN1Q86U42 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC26.15■■□□□ 1.786e-12■■□□□ 12
PABPN1Q86U42 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC20.23■□□□□ 0.836e-12■■□□□ 12
PABPN1Q86U42 WDR6-204ENST00000420783 3656 ntTSL 1 (best)17.46■□□□□ 0.396e-12■■□□□ 12
PABPN1Q86U42 WDR6-211ENST00000471162 3565 ntTSL 1 (best)16.8■□□□□ 0.286e-12■■□□□ 12
PABPN1Q86U42 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC35.64■■■■□ 3.31e-6■■□□□ 12
PABPN1Q86U42 PAH-208ENST00000549247 961 ntTSL 212.29□□□□□ -0.441e-6■■□□□ 12
PABPN1Q86U42 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.062e-8■■□□□ 12
PABPN1Q86U42 OSGEP-210ENST00000556124 1546 ntTSL 524.26■■□□□ 1.472e-8■■□□□ 12
PABPN1Q86U42 OSGEP-204ENST00000554249 987 ntTSL 220.84■□□□□ 0.932e-8■■□□□ 12
PABPN1Q86U42 OSGEP-202ENST00000553292 530 ntTSL 216.55■□□□□ 0.242e-8■■□□□ 12
PABPN1Q86U42 OSGEP-208ENST00000555656 3258 ntTSL 211.89□□□□□ -0.512e-8■■□□□ 12
PABPN1Q86U42 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.291e-6■■□□□ 12
PABPN1Q86U42 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.941e-6■■□□□ 12
PABPN1Q86U42 ARAP1-211ENST00000495878 2758 ntTSL 1 (best)20.56■□□□□ 0.881e-6■■□□□ 12
PABPN1Q86U42 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC20.37■□□□□ 0.851e-6■■□□□ 12
PABPN1Q86U42 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.811e-6■■□□□ 12
PABPN1Q86U42 ARAP1-210ENST00000465814 5612 ntTSL 219.91■□□□□ 0.781e-6■■□□□ 12
PABPN1Q86U42 NADSYN1-215ENST00000529840 820 ntTSL 527.29■■□□□ 1.961e-6■■□□□ 12
PABPN1Q86U42 NADSYN1-207ENST00000526039 769 ntTSL 524.55■■□□□ 1.521e-6■■□□□ 12
PABPN1Q86U42 SLC26A6-219ENST00000485361 575 ntTSL 431.18■■■□□ 2.587e-28■■□□□ 12
PABPN1Q86U42 SLC26A6-221ENST00000494717 255 ntTSL 421.93■■□□□ 1.17e-28■■□□□ 12
PABPN1Q86U42 NECAB3-216ENST00000498353 597 ntTSL 335.72■■■■□ 3.316e-9■■□□□ 12
PABPN1Q86U42 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC25.39■■□□□ 1.652e-6■■□□□ 12
PABPN1Q86U42 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.012e-6■■□□□ 12
PABPN1Q86U42 COPG1-210ENST00000515725 3231 ntTSL 216.11■□□□□ 0.176e-9■■□□□ 12
PABPN1Q86U42 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.096e-9■■□□□ 12
PABPN1Q86U42 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC12.88□□□□□ -0.352e-6■■□□□ 12
PABPN1Q86U42 ARHGAP45-207ENST00000586937 579 ntTSL 248.8■■■■■ 5.46e-9■■□□□ 12
Retrieved 100 of 8,254 protein–RNA pairs in 68.7 ms