RNA–Protein interactions for RNA: ENST00000583025.1

SLC16A3-216, Transcript of solute carrier family 16 member 3, humanhuman

TSL 2

Gene SLC16A3, Length 955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC16A3-216ENST00000583025 NISCHQ9Y2I1 1504 aa47.43■■■■■ 5.18
SLC16A3-216ENST00000583025 CCDC180Q9P1Z9 1646 aa42.3■■■■■ 4.36
SLC16A3-216ENST00000583025 ABCC9O60706 1549 aa41.85■■■■■ 4.29
SLC16A3-216ENST00000583025 RB1CC1Q8TDY2 1594 aa40.06■■■■■ 4
SLC16A3-216ENST00000583025 NACADO15069 1562 aa39.89■■■■□ 3.98
SLC16A3-216ENST00000583025 DCAF8L2P0C7V8 631 aa39.78■■■■□ 3.96
SLC16A3-216ENST00000583025 MYO15BQ96JP2 1530 aa39.5■■■■□ 3.91
SLC16A3-216ENST00000583025 ZCCHC6Q5VYS8 1495 aaKnown RBP39.49■■■■□ 3.91
SLC16A3-216ENST00000583025 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
SLC16A3-216ENST00000583025 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
SLC16A3-216ENST00000583025 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.841e-19■■□□□ 12.1
SLC16A3-216ENST00000583025 BICRAQ9NZM4 1560 aa38.81■■■■□ 3.8
SLC16A3-216ENST00000583025 DNAJC5BQ9UF47 199 aa38.78■■■■□ 3.8
SLC16A3-216ENST00000583025 SCRIBQ14160 1630 aa38.57■■■■□ 3.77
SLC16A3-216ENST00000583025 SHROOM4Q9ULL8 1493 aa38.44■■■■□ 3.74
SLC16A3-216ENST00000583025 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
SLC16A3-216ENST00000583025 CC2D2AQ9P2K1 1620 aa37.82■■■■□ 3.64
SLC16A3-216ENST00000583025 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
SLC16A3-216ENST00000583025 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
SLC16A3-216ENST00000583025 NCAPD3P42695 1498 aa36.82■■■■□ 3.48
SLC16A3-216ENST00000583025 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
SLC16A3-216ENST00000583025 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
SLC16A3-216ENST00000583025 SMARCA2P51531 1590 aa36.71■■■■□ 3.47
SLC16A3-216ENST00000583025 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
SLC16A3-216ENST00000583025 MROH2BQ7Z745 1585 aa36.59■■■■□ 3.45
SLC16A3-216ENST00000583025 PEG3Q9GZU2 1588 aa36.48■■■■□ 3.43
SLC16A3-216ENST00000583025 BAZ1BQ9UIG0 1483 aaKnown RBP36.45■■■■□ 3.43
SLC16A3-216ENST00000583025 WIZO95785 1651 aa36.17■■■■□ 3.38
SLC16A3-216ENST00000583025 ERCC6Q03468 1493 aa36.14■■■■□ 3.38
SLC16A3-216ENST00000583025 RSF1Q96T23 1441 aaPredicted RBP36.09■■■■□ 3.37
SLC16A3-216ENST00000583025 NESP48681 1621 aa36.05■■■■□ 3.36
SLC16A3-216ENST00000583025 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
SLC16A3-216ENST00000583025 CUX2O14529 1486 aa35.92■■■■□ 3.34
SLC16A3-216ENST00000583025 TOP2AP11388 1531 aaKnown RBP35.75■■■■□ 3.31
SLC16A3-216ENST00000583025 CADPSQ9ULU8 1353 aa35.73■■■■□ 3.31
SLC16A3-216ENST00000583025 PDS5BQ9NTI5 1447 aa35.73■■■■□ 3.31
SLC16A3-216ENST00000583025 THOC2Q8NI27 1593 aaKnown RBP35.61■■■■□ 3.29
SLC16A3-216ENST00000583025 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
SLC16A3-216ENST00000583025 CFTRP13569 1480 aa35.41■■■■□ 3.26
SLC16A3-216ENST00000583025 MRC2Q9UBG0 1479 aa35.37■■■■□ 3.25
SLC16A3-216ENST00000583025 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
SLC16A3-216ENST00000583025 DNAJC5Q9H3Z4 198 aa35.34■■■■□ 3.25
SLC16A3-216ENST00000583025 CEP164Q9UPV0 1460 aa35.34■■■■□ 3.25
SLC16A3-216ENST00000583025 FANCD2Q9BXW9 1451 aa35.32■■■■□ 3.24
SLC16A3-216ENST00000583025 WDR62O43379 1518 aa35.26■■■■□ 3.23
SLC16A3-216ENST00000583025 PRDM2Q13029 1718 aa35.07■■■■□ 3.2
SLC16A3-216ENST00000583025 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
SLC16A3-216ENST00000583025 URB2Q14146 1524 aaKnown RBP34.96■■■■□ 3.19
SLC16A3-216ENST00000583025 ABCC8Q09428 1581 aa34.7■■■■□ 3.14
SLC16A3-216ENST00000583025 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
SLC16A3-216ENST00000583025 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
SLC16A3-216ENST00000583025 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
SLC16A3-216ENST00000583025 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
SLC16A3-216ENST00000583025 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
SLC16A3-216ENST00000583025 OSCARQ8IYS5 282 aa34.35■■■■□ 3.09
SLC16A3-216ENST00000583025 CUX1P39880 1505 aa34.34■■■■□ 3.09
SLC16A3-216ENST00000583025 TARBP1Q13395 1621 aaKnown RBP34.32■■■■□ 3.08
SLC16A3-216ENST00000583025 EIF4G3O43432 1585 aaKnown RBP34.31■■■■□ 3.08
SLC16A3-216ENST00000583025 SOGA1O94964 1423 aa34.23■■■■□ 3.07
SLC16A3-216ENST00000583025 FGD5Q6ZNL6 1462 aa34.23■■■■□ 3.07
SLC16A3-216ENST00000583025 RAD54L2Q9Y4B4 1467 aa34.22■■■■□ 3.07
SLC16A3-216ENST00000583025 AQRO60306 1485 aaKnown RBP eCLIP34.21■■■■□ 3.073e-10■■■■■ 71.5
SLC16A3-216ENST00000583025 TDRD9Q8NDG6 1382 aaKnown RBP34.09■■■■□ 3.05
SLC16A3-216ENST00000583025 WDR97A6NE52 1622 aa34.07■■■■□ 3.04
SLC16A3-216ENST00000583025 WRNQ14191 1432 aaPredicted RBP eCLIP34■■■■□ 3.03
SLC16A3-216ENST00000583025 TRIM41Q8WV44 630 aa34■■■■□ 3.03
SLC16A3-216ENST00000583025 SYNJ1O43426 1573 aa33.98■■■■□ 3.03
SLC16A3-216ENST00000583025 TOP2BQ02880 1626 aa33.94■■■■□ 3.02
SLC16A3-216ENST00000583025 BIVM-ERCC5R4GMW8 1640 aa33.94■■■■□ 3.02
SLC16A3-216ENST00000583025 CHD1O14646 1710 aa33.94■■■■□ 3.02
SLC16A3-216ENST00000583025 FBLN2P98095 1184 aa33.94■■■■□ 3.02
SLC16A3-216ENST00000583025 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
SLC16A3-216ENST00000583025 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
SLC16A3-216ENST00000583025 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
SLC16A3-216ENST00000583025 MAGI1Q96QZ7 1491 aaPredicted RBP33.85■■■■□ 3.01
SLC16A3-216ENST00000583025 GAPVD1Q14C86 1478 aa33.82■■■■□ 3.01
SLC16A3-216ENST00000583025 RIMBP3CA6NJZ7 1639 aa33.81■■■■□ 3
SLC16A3-216ENST00000583025 RIMBP3BA6NNM3 1639 aa33.81■■■■□ 3
SLC16A3-216ENST00000583025 RIMBP3Q9UFD9 1639 aa33.81■■■■□ 3
SLC16A3-216ENST00000583025 ARHGEF11O15085 1522 aa33.78■■■■□ 3
SLC16A3-216ENST00000583025 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
SLC16A3-216ENST00000583025 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
SLC16A3-216ENST00000583025 PBRM1Q86U86 1689 aa33.75■■■□□ 2.99
SLC16A3-216ENST00000583025 SYNJ2O15056 1496 aa33.73■■■□□ 2.99
SLC16A3-216ENST00000583025 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
SLC16A3-216ENST00000583025 CYB5RLQ6IPT4 315 aa33.5■■■□□ 2.95
SLC16A3-216ENST00000583025 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
SLC16A3-216ENST00000583025 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
SLC16A3-216ENST00000583025 ERICH3Q5RHP9 1530 aa33.46■■■□□ 2.95
SLC16A3-216ENST00000583025 GRIN2AQ12879 1464 aa33.44■■■□□ 2.94
SLC16A3-216ENST00000583025 FHAD1B1AJZ9 1412 aa33.43■■■□□ 2.94
SLC16A3-216ENST00000583025 NUP160Q12769 1436 aa33.31■■■□□ 2.92
SLC16A3-216ENST00000583025 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
SLC16A3-216ENST00000583025 KIF27Q86VH2 1401 aa33.28■■■□□ 2.92
SLC16A3-216ENST00000583025 IGF1RP08069 1367 aa33.21■■■□□ 2.91
SLC16A3-216ENST00000583025 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
SLC16A3-216ENST00000583025 CUL7Q14999 1698 aa33.07■■■□□ 2.89
SLC16A3-216ENST00000583025 ERCC6L2Q5T890 1561 aa33.06■■■□□ 2.88
SLC16A3-216ENST00000583025 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
SLC16A3-216ENST00000583025 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms